RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 CRYGAP11844 174 aa8.25□□□□□ -1.09
PPP4R1-206ENST00000577779 TYMSOSQ8TAI1 123 aa8.25□□□□□ -1.09
PPP4R1-206ENST00000577779 IGLV7-46A0A075B6I9 117 aa8.24□□□□□ -1.09
PPP4R1-206ENST00000577779 A0A087X002 238 aa8.24□□□□□ -1.09
PPP4R1-206ENST00000577779 C19orf71A6NCJ1 209 aa8.24□□□□□ -1.09
PPP4R1-206ENST00000577779 INMT-MINDY4F8WBC2 141 aa8.24□□□□□ -1.09
PPP4R1-206ENST00000577779 ESDP10768 282 aa8.24□□□□□ -1.09
PPP4R1-206ENST00000577779 RNF151Q2KHN1 245 aa8.24□□□□□ -1.09
PPP4R1-206ENST00000577779 MAP1LC3B2A6NCE7 125 aa8.23□□□□□ -1.09
PPP4R1-206ENST00000577779 GATD1Q8NB37 220 aa8.23□□□□□ -1.09
PPP4R1-206ENST00000577779 MAP1LC3BQ9GZQ8 125 aa8.23□□□□□ -1.09
PPP4R1-206ENST00000577779 M0QXV9 152 aa8.22□□□□□ -1.09
PPP4R1-206ENST00000577779 ZNF861PO60384 105 aa8.22□□□□□ -1.09
PPP4R1-206ENST00000577779 ANAPC16Q96DE5 110 aa8.22□□□□□ -1.09
PPP4R1-206ENST00000577779 IMMP2LQ96T52 175 aa8.22□□□□□ -1.09
PPP4R1-206ENST00000577779 F2Z2F3 143 aa8.21□□□□□ -1.1
PPP4R1-206ENST00000577779 PAGE4O60829 102 aa8.21□□□□□ -1.1
PPP4R1-206ENST00000577779 DEFA1P59665 94 aa8.21□□□□□ -1.1
PPP4R1-206ENST00000577779 RPS20P60866 119 aaKnown RBP8.21□□□□□ -1.1
PPP4R1-206ENST00000577779 SPAG11BQ08648 103 aa8.21□□□□□ -1.1
PPP4R1-206ENST00000577779 AKR1C8PQ5T2L2 129 aa8.21□□□□□ -1.1
PPP4R1-206ENST00000577779 RPL39LQ96EH5 51 aaKnown RBP8.21□□□□□ -1.1
PPP4R1-206ENST00000577779 CDC42SE2Q9NRR3 84 aa8.21□□□□□ -1.1
PPP4R1-206ENST00000577779 SDHAF1A6NFY7 115 aa8.2□□□□□ -1.1
PPP4R1-206ENST00000577779 C1orf196B1AJZ1 125 aa8.2□□□□□ -1.1
PPP4R1-206ENST00000577779 RPL7L1Q6DKI1 246 aaKnown RBP8.2□□□□□ -1.1
PPP4R1-206ENST00000577779 G3V3Q6 166 aa8.19□□□□□ -1.1
PPP4R1-206ENST00000577779 LYZL1Q6UWQ5 148 aa8.19□□□□□ -1.1
PPP4R1-206ENST00000577779 LINC00173Q6ZV60 143 aa8.19□□□□□ -1.1
PPP4R1-206ENST00000577779 KRTAP7-1Q8IUC3 87 aa8.19□□□□□ -1.1
PPP4R1-206ENST00000577779 MRPL35Q9NZE8 188 aaKnown RBP8.19□□□□□ -1.1
PPP4R1-206ENST00000577779 PMCHP20382 165 aa8.18□□□□□ -1.1
PPP4R1-206ENST00000577779 GAGE2EQ4V326 116 aa8.18□□□□□ -1.1
PPP4R1-206ENST00000577779 C5orf38Q86SI9 138 aa8.18□□□□□ -1.1
PPP4R1-206ENST00000577779 MRAP2Q96G30 205 aa8.18□□□□□ -1.1
PPP4R1-206ENST00000577779 GAGE2DQ9UEU5 116 aa8.18□□□□□ -1.1
PPP4R1-206ENST00000577779 BORCS7-ASMTA0A0B4J1R7 106 aa8.17□□□□□ -1.1
PPP4R1-206ENST00000577779 I3L3M4 83 aa8.17□□□□□ -1.1
PPP4R1-206ENST00000577779 TMUB2Q71RG4 321 aa8.17□□□□□ -1.1
PPP4R1-206ENST00000577779 MRPL52Q86TS9 123 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-206ENST00000577779 XKRY2A2RUG3 117 aa8.16□□□□□ -1.1
PPP4R1-206ENST00000577779 KRTAP9-7A8MTY7 169 aa8.16□□□□□ -1.1
PPP4R1-206ENST00000577779 PFDN1O60925 122 aa8.16□□□□□ -1.1
PPP4R1-206ENST00000577779 IFNA1P01562 189 aa8.16□□□□□ -1.1
PPP4R1-206ENST00000577779 TLX1NBP0CAT3 122 aa8.16□□□□□ -1.1
PPP4R1-206ENST00000577779 TWIST1Q15672 202 aa8.16□□□□□ -1.1
PPP4R1-206ENST00000577779 OR10D4PQ8NGN7 298 aa8.16□□□□□ -1.1
PPP4R1-206ENST00000577779 ALG5Q9Y673 324 aa8.16□□□□□ -1.1
PPP4R1-206ENST00000577779 NDUFA1O15239 70 aa8.15□□□□□ -1.1
PPP4R1-206ENST00000577779 RPL35P42766 123 aaKnown RBP8.15□□□□□ -1.1
PPP4R1-206ENST00000577779 LINC00304Q8N9R0 145 aa8.15□□□□□ -1.1
PPP4R1-206ENST00000577779 MARVELD1Q9BSK0 173 aa8.15□□□□□ -1.1
PPP4R1-206ENST00000577779 PPDPFQ9H3Y8 114 aa8.15□□□□□ -1.1
PPP4R1-206ENST00000577779 SMDT1Q9H4I9 107 aa8.15□□□□□ -1.1
PPP4R1-206ENST00000577779 TRAV13-1A0A0B4J241 112 aa8.14□□□□□ -1.11
PPP4R1-206ENST00000577779 TSHBP01222 138 aa8.14□□□□□ -1.11
PPP4R1-206ENST00000577779 C10orf25Q5T742 122 aa8.14□□□□□ -1.11
PPP4R1-206ENST00000577779 TMEM242Q9NWH2 141 aa8.14□□□□□ -1.11
PPP4R1-206ENST00000577779 F8WDY8 70 aa8.13□□□□□ -1.11
PPP4R1-206ENST00000577779 TMEM241Q24JQ0 296 aa8.13□□□□□ -1.11
PPP4R1-206ENST00000577779 ASB16-AS1Q495Z4 193 aa8.13□□□□□ -1.11
PPP4R1-206ENST00000577779 TEX261Q6UWH6 196 aa8.13□□□□□ -1.11
PPP4R1-206ENST00000577779 ORAOV1Q8WV07 137 aa8.13□□□□□ -1.11
PPP4R1-206ENST00000577779 KRTAP4-1Q9BYQ7 146 aa8.13□□□□□ -1.11
PPP4R1-206ENST00000577779 NUPR1O60356 82 aa8.12□□□□□ -1.11
PPP4R1-206ENST00000577779 CTRLP40313 264 aa8.12□□□□□ -1.11
PPP4R1-206ENST00000577779 KRTAP13-2Q52LG2 175 aa8.12□□□□□ -1.11
PPP4R1-206ENST00000577779 RNASE13Q5GAN3 156 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-206ENST00000577779 UNQ6190/PRO20217Q6UXQ8 127 aa8.12□□□□□ -1.11
PPP4R1-206ENST00000577779 C9orf62Q8N4C0 152 aa8.12□□□□□ -1.11
PPP4R1-206ENST00000577779 KRTAP4-8Q9BYQ9 185 aa8.12□□□□□ -1.11
PPP4R1-206ENST00000577779 ANAPC11Q9NYG5 84 aa8.12□□□□□ -1.11
PPP4R1-206ENST00000577779 C6orf48Q9UBA6 75 aa8.12□□□□□ -1.11
PPP4R1-206ENST00000577779 A0A1B0GV50 99 aa8.11□□□□□ -1.11
PPP4R1-206ENST00000577779 C7orf77A4D0Y5 90 aa8.11□□□□□ -1.11
PPP4R1-206ENST00000577779 RPL28P46779 137 aaKnown RBP8.11□□□□□ -1.11
PPP4R1-206ENST00000577779 ANKRD39Q53RE8 183 aa8.11□□□□□ -1.11
PPP4R1-206ENST00000577779 CENPWQ5EE01 88 aa8.11□□□□□ -1.11
PPP4R1-206ENST00000577779 CTDSP1Q9GZU7 261 aa8.11□□□□□ -1.11
PPP4R1-206ENST00000577779 SMIM15Q7Z3B0 74 aa8.1□□□□□ -1.11
PPP4R1-206ENST00000577779 LINC00337Q8N6G1 96 aa8.1□□□□□ -1.11
PPP4R1-206ENST00000577779 SFT2D1Q8WV19 159 aa8.1□□□□□ -1.11
PPP4R1-206ENST00000577779 CNFNQ9BYD5 112 aa8.1□□□□□ -1.11
PPP4R1-206ENST00000577779 RNASE7Q9H1E1 156 aaKnown RBP8.1□□□□□ -1.11
PPP4R1-206ENST00000577779 TRBV6-5A0A0K0K1A5 114 aa8.09□□□□□ -1.11
PPP4R1-206ENST00000577779 FOXA3P55318 350 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-206ENST00000577779 FAM210AQ96ND0 272 aa8.09□□□□□ -1.11
PPP4R1-206ENST00000577779 UPK1BO75841 260 aa8.08□□□□□ -1.12
PPP4R1-206ENST00000577779 C9orf129Q5T035 196 aaKnown RBP8.08□□□□□ -1.12
PPP4R1-206ENST00000577779 KCNRGQ8N5I3 272 aa8.08□□□□□ -1.12
PPP4R1-206ENST00000577779 ST20Q9HBF5 79 aa8.08□□□□□ -1.12
PPP4R1-206ENST00000577779 Q5BKY6 102 aa8.07□□□□□ -1.12
PPP4R1-206ENST00000577779 CSDC2Q9Y534 153 aaKnown RBP8.07□□□□□ -1.12
PPP4R1-206ENST00000577779 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.06□□□□□ -1.12
PPP4R1-206ENST00000577779 CFC1BP0CG36 223 aa8.06□□□□□ -1.12
PPP4R1-206ENST00000577779 SEC61BP60468 96 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-206ENST00000577779 SMAGPQ0VAQ4 97 aa8.06□□□□□ -1.12
PPP4R1-206ENST00000577779 UBE2D4Q9Y2X8 147 aa8.06□□□□□ -1.12
PPP4R1-206ENST00000577779 FXYD6-FXYD2A0A087WZ82 144 aa8.05□□□□□ -1.12
PPP4R1-206ENST00000577779 NDUFC2-KCTD14E9PQ53 114 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms