RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 FAM210AQ96ND0 272 aa7.13□□□□□ -1.27
CTDNEP1-212ENST00000576613 RPP21Q9H633 154 aaKnown RBP7.13□□□□□ -1.27
CTDNEP1-212ENST00000576613 TRBV20OR9-2A0A075B6H5 130 aa7.12□□□□□ -1.27
CTDNEP1-212ENST00000576613 IGLV4-69A0A075B6H9 119 aa7.12□□□□□ -1.27
CTDNEP1-212ENST00000576613 A0A1W2PNN7 141 aa7.12□□□□□ -1.27
CTDNEP1-212ENST00000576613 SMLR1H3BR10 107 aa7.12□□□□□ -1.27
CTDNEP1-212ENST00000576613 APOMO95445 188 aa7.12□□□□□ -1.27
CTDNEP1-212ENST00000576613 C1orf137Q5JT78 98 aa7.12□□□□□ -1.27
CTDNEP1-212ENST00000576613 DIRC1Q969H9 104 aa7.12□□□□□ -1.27
CTDNEP1-212ENST00000576613 MED9Q9NWA0 146 aa7.12□□□□□ -1.27
CTDNEP1-212ENST00000576613 TRBV6-5A0A0K0K1A5 114 aa7.11□□□□□ -1.27
CTDNEP1-212ENST00000576613 HMSDA8MTL9 139 aa7.11□□□□□ -1.27
CTDNEP1-212ENST00000576613 BCL2P10415 239 aa7.11□□□□□ -1.27
CTDNEP1-212ENST00000576613 ESDP10768 282 aa7.11□□□□□ -1.27
CTDNEP1-212ENST00000576613 C9orf116Q5BN46 136 aaPredicted RBP7.11□□□□□ -1.27
CTDNEP1-212ENST00000576613 MRPL52Q86TS9 123 aaKnown RBP7.11□□□□□ -1.27
CTDNEP1-212ENST00000576613 NUP35Q8NFH5 326 aa7.11□□□□□ -1.27
CTDNEP1-212ENST00000576613 CAMK2N2Q96S95 79 aa7.11□□□□□ -1.27
CTDNEP1-212ENST00000576613 CDC42SE2Q9NRR3 84 aa7.11□□□□□ -1.27
CTDNEP1-212ENST00000576613 COX7A2LO14548 114 aa7.1□□□□□ -1.27
CTDNEP1-212ENST00000576613 TSHBP01222 138 aa7.1□□□□□ -1.27
CTDNEP1-212ENST00000576613 RPL18AQ02543 176 aaKnown RBP7.1□□□□□ -1.27
CTDNEP1-212ENST00000576613 PRR26Q8N8Z3 221 aa7.1□□□□□ -1.27
CTDNEP1-212ENST00000576613 TSKUQ8WUA8 353 aa7.1□□□□□ -1.27
CTDNEP1-212ENST00000576613 RNASE7Q9H1E1 156 aaKnown RBP7.1□□□□□ -1.27
CTDNEP1-212ENST00000576613 A0A0U1RQV1 116 aa7.09□□□□□ -1.27
CTDNEP1-212ENST00000576613 C1orf196B1AJZ1 125 aa7.09□□□□□ -1.27
CTDNEP1-212ENST00000576613 FOXA3P55318 350 aaPredicted RBP7.09□□□□□ -1.27
CTDNEP1-212ENST00000576613 C2orf48Q96LS8 159 aa7.09□□□□□ -1.27
CTDNEP1-212ENST00000576613 ST20Q9HBF5 79 aa7.09□□□□□ -1.27
CTDNEP1-212ENST00000576613 TMEM242Q9NWH2 141 aa7.09□□□□□ -1.27
CTDNEP1-212ENST00000576613 C7orf77A4D0Y5 90 aa7.08□□□□□ -1.28
CTDNEP1-212ENST00000576613 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.08□□□□□ -1.28
CTDNEP1-212ENST00000576613 IGLV7-43P04211 117 aa7.08□□□□□ -1.28
CTDNEP1-212ENST00000576613 SMAGPQ0VAQ4 97 aa7.08□□□□□ -1.28
CTDNEP1-212ENST00000576613 PHF5AQ7RTV0 110 aaKnown RBP7.08□□□□□ -1.28
CTDNEP1-212ENST00000576613 H0Y9J4 135 aa7.07□□□□□ -1.28
CTDNEP1-212ENST00000576613 BORCS7Q96B45 105 aa7.07□□□□□ -1.28
CTDNEP1-212ENST00000576613 MUC2Q02817 5179 aa7.06□□□□□ -1.28
CTDNEP1-212ENST00000576613 IGLV1-50A0A075B6I6 118 aa7.06□□□□□ -1.28
CTDNEP1-212ENST00000576613 TRBV27A0A0K0K1C4 114 aa7.06□□□□□ -1.28
CTDNEP1-212ENST00000576613 K7EN84 100 aa7.06□□□□□ -1.28
CTDNEP1-212ENST00000576613 TAGLN2P37802 199 aaKnown RBP7.06□□□□□ -1.28
CTDNEP1-212ENST00000576613 RNF151Q2KHN1 245 aa7.06□□□□□ -1.28
CTDNEP1-212ENST00000576613 RGS21Q2M5E4 152 aa7.06□□□□□ -1.28
CTDNEP1-212ENST00000576613 OCC1Q8TAD7 63 aa7.06□□□□□ -1.28
CTDNEP1-212ENST00000576613 BATF3Q9NR55 127 aa7.06□□□□□ -1.28
CTDNEP1-212ENST00000576613 A0A087WZ39 114 aa7.05□□□□□ -1.28
CTDNEP1-212ENST00000576613 A8MWL6 223 aa7.05□□□□□ -1.28
CTDNEP1-212ENST00000576613 FCER1GP30273 86 aa7.05□□□□□ -1.28
CTDNEP1-212ENST00000576613 SPAG11BQ08648 103 aa7.05□□□□□ -1.28
CTDNEP1-212ENST00000576613 PRR4Q16378 134 aa7.05□□□□□ -1.28
CTDNEP1-212ENST00000576613 CSDC2Q9Y534 153 aaKnown RBP7.05□□□□□ -1.28
CTDNEP1-212ENST00000576613 TRAV13-1A0A0B4J241 112 aa7.04□□□□□ -1.28
CTDNEP1-212ENST00000576613 GATCO43716 136 aaKnown RBP7.04□□□□□ -1.28
CTDNEP1-212ENST00000576613 UBE2D1P51668 147 aa7.04□□□□□ -1.28
CTDNEP1-212ENST00000576613 POLR2KP53803 58 aaKnown RBP7.04□□□□□ -1.28
CTDNEP1-212ENST00000576613 C5orf38Q86SI9 138 aa7.04□□□□□ -1.28
CTDNEP1-212ENST00000576613 OR10D4PQ8NGN7 298 aa7.04□□□□□ -1.28
CTDNEP1-212ENST00000576613 IMMP2LQ96T52 175 aa7.04□□□□□ -1.28
CTDNEP1-212ENST00000576613 OPRPNQ99935 248 aaPredicted RBP7.04□□□□□ -1.28
CTDNEP1-212ENST00000576613 KRTAP9-2Q9BYQ4 174 aa7.04□□□□□ -1.28
CTDNEP1-212ENST00000576613 VCYO14598 125 aa7.03□□□□□ -1.28
CTDNEP1-212ENST00000576613 RPL13AP40429 203 aaKnown RBP7.03□□□□□ -1.28
CTDNEP1-212ENST00000576613 TMEM191AQ9H0A3 160 aa7.03□□□□□ -1.28
CTDNEP1-212ENST00000576613 MRPL35Q9NZE8 188 aaKnown RBP7.03□□□□□ -1.28
CTDNEP1-212ENST00000576613 UBE2D4Q9Y2X8 147 aa7.03□□□□□ -1.28
CTDNEP1-212ENST00000576613 F8WDY8 70 aa7.02□□□□□ -1.29
CTDNEP1-212ENST00000576613 RNASE13Q5GAN3 156 aaKnown RBP7.02□□□□□ -1.29
CTDNEP1-212ENST00000576613 CT83Q5H943 113 aa7.02□□□□□ -1.29
CTDNEP1-212ENST00000576613 FAM231DQ6ZW35 169 aa7.02□□□□□ -1.29
CTDNEP1-212ENST00000576613 KIR2DL4Q99706 377 aa7.02□□□□□ -1.29
CTDNEP1-212ENST00000576613 A0A1B0GUT8 65 aa7.01□□□□□ -1.29
CTDNEP1-212ENST00000576613 NDUFA1O15239 70 aa7.01□□□□□ -1.29
CTDNEP1-212ENST00000576613 PPP1R17O96001 155 aa7.01□□□□□ -1.29
CTDNEP1-212ENST00000576613 FAM19A5Q7Z5A7 132 aaPredicted RBP7.01□□□□□ -1.29
CTDNEP1-212ENST00000576613 TMEM18Q96B42 140 aa7.01□□□□□ -1.29
CTDNEP1-212ENST00000576613 FAM168BA1KXE4 195 aa7□□□□□ -1.29
CTDNEP1-212ENST00000576613 KRTAP1-4P0C5Y4 121 aa7□□□□□ -1.29
CTDNEP1-212ENST00000576613 RAB4AP20338 218 aa7□□□□□ -1.29
CTDNEP1-212ENST00000576613 Q6ZUT4 128 aa7□□□□□ -1.29
CTDNEP1-212ENST00000576613 ORAOV1Q8WV07 137 aa7□□□□□ -1.29
CTDNEP1-212ENST00000576613 TIMM21Q9BVV7 248 aa7□□□□□ -1.29
CTDNEP1-212ENST00000576613 HIGD1CA8MV81 97 aa6.99□□□□□ -1.29
CTDNEP1-212ENST00000576613 TMEM250H0YL14 139 aa6.99□□□□□ -1.29
CTDNEP1-212ENST00000576613 TLX1NBP0CAT3 122 aa6.99□□□□□ -1.29
CTDNEP1-212ENST00000576613 SUMO2P61956 95 aaKnown RBP6.99□□□□□ -1.29
CTDNEP1-212ENST00000576613 UBE2BP63146 152 aa6.99□□□□□ -1.29
CTDNEP1-212ENST00000576613 TMEM241Q24JQ0 296 aa6.99□□□□□ -1.29
CTDNEP1-212ENST00000576613 KRTAP11-1Q8IUC1 163 aa6.99□□□□□ -1.29
CTDNEP1-212ENST00000576613 AMN1Q8IY45 258 aa6.99□□□□□ -1.29
CTDNEP1-212ENST00000576613 M0QXV9 152 aa6.98□□□□□ -1.29
CTDNEP1-212ENST00000576613 PPP1R2P9O14990 202 aa6.98□□□□□ -1.29
CTDNEP1-212ENST00000576613 SMKR1H3BMG3 65 aa6.97□□□□□ -1.29
CTDNEP1-212ENST00000576613 GAGE2EQ4V326 116 aa6.97□□□□□ -1.29
CTDNEP1-212ENST00000576613 SMDT1Q9H4I9 107 aa6.97□□□□□ -1.29
CTDNEP1-212ENST00000576613 GAGE2DQ9UEU5 116 aa6.97□□□□□ -1.29
CTDNEP1-212ENST00000576613 CARHSP1Q9Y2V2 147 aaKnown RBP6.97□□□□□ -1.29
CTDNEP1-212ENST00000576613 IGHV3OR16-9A0A0B4J2B5 98 aa6.96□□□□□ -1.3
CTDNEP1-212ENST00000576613 TCAPO15273 167 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms