RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 SFT2D1Q8WV19 159 aa7.36□□□□□ -1.23
PRPF8-208ENST00000573716 RPL39LQ96EH5 51 aaKnown RBP7.36□□□□□ -1.23
PRPF8-208ENST00000573716 MED28Q9H204 178 aa7.36□□□□□ -1.23
PRPF8-208ENST00000573716 F2Z2F3 143 aa7.35□□□□□ -1.23
PRPF8-208ENST00000573716 H7C423 109 aa7.35□□□□□ -1.23
PRPF8-208ENST00000573716 NCR2O95944 276 aa7.35□□□□□ -1.23
PRPF8-208ENST00000573716 IFNA1P01562 189 aa7.35□□□□□ -1.23
PRPF8-208ENST00000573716 RPL35P42766 123 aaKnown RBP7.35□□□□□ -1.23
PRPF8-208ENST00000573716 FAM213BQ8TBF2 198 aa7.35□□□□□ -1.23
PRPF8-208ENST00000573716 CAMK2N2Q96S95 79 aa7.35□□□□□ -1.23
PRPF8-208ENST00000573716 TRAV1-1A0A0B4J248 108 aa7.34□□□□□ -1.23
PRPF8-208ENST00000573716 XKRY2A2RUG3 117 aa7.34□□□□□ -1.23
PRPF8-208ENST00000573716 APOMO95445 188 aa7.34□□□□□ -1.23
PRPF8-208ENST00000573716 ZNF25P17030 456 aaPredicted RBP7.34□□□□□ -1.23
PRPF8-208ENST00000573716 TWIST1Q15672 202 aa7.34□□□□□ -1.23
PRPF8-208ENST00000573716 CENPWQ5EE01 88 aa7.34□□□□□ -1.23
PRPF8-208ENST00000573716 KCNRGQ8N5I3 272 aa7.34□□□□□ -1.23
PRPF8-208ENST00000573716 LINC00469Q8N7U9 141 aa7.34□□□□□ -1.23
PRPF8-208ENST00000573716 OPRPNQ99935 248 aaPredicted RBP7.34□□□□□ -1.23
PRPF8-208ENST00000573716 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.33□□□□□ -1.24
PRPF8-208ENST00000573716 TSPAN13O95857 204 aa7.33□□□□□ -1.24
PRPF8-208ENST00000573716 MEF2BQ02080 365 aaPredicted RBP7.33□□□□□ -1.24
PRPF8-208ENST00000573716 EIF5AL1Q6IS14 154 aaKnown RBP7.33□□□□□ -1.24
PRPF8-208ENST00000573716 CD164L2Q6UWJ8 174 aa7.33□□□□□ -1.24
PRPF8-208ENST00000573716 NUP35Q8NFH5 326 aa7.33□□□□□ -1.24
PRPF8-208ENST00000573716 FAT4Q6V0I7 4981 aa7.33□□□□□ -1.24
PRPF8-208ENST00000573716 SDHAF1A6NFY7 115 aa7.32□□□□□ -1.24
PRPF8-208ENST00000573716 PMCHP20382 165 aa7.32□□□□□ -1.24
PRPF8-208ENST00000573716 TMA7Q9Y2S6 64 aaKnown RBP7.32□□□□□ -1.24
PRPF8-208ENST00000573716 COX7A2LO14548 114 aa7.31□□□□□ -1.24
PRPF8-208ENST00000573716 BCL2L11O43521 198 aa7.31□□□□□ -1.24
PRPF8-208ENST00000573716 GIPP09681 153 aaPredicted RBP7.31□□□□□ -1.24
PRPF8-208ENST00000573716 RPL13AP40429 203 aaKnown RBP7.31□□□□□ -1.24
PRPF8-208ENST00000573716 RAB19A4D1S5 217 aa7.3□□□□□ -1.24
PRPF8-208ENST00000573716 C19orf71A6NCJ1 209 aa7.3□□□□□ -1.24
PRPF8-208ENST00000573716 KRTAP1-4P0C5Y4 121 aa7.3□□□□□ -1.24
PRPF8-208ENST00000573716 FAM19A5Q7Z5A7 132 aaPredicted RBP7.3□□□□□ -1.24
PRPF8-208ENST00000573716 KRTAP11-1Q8IUC1 163 aa7.3□□□□□ -1.24
PRPF8-208ENST00000573716 MRAP2Q96G30 205 aa7.3□□□□□ -1.24
PRPF8-208ENST00000573716 CYTL1Q9NRR1 136 aa7.3□□□□□ -1.24
PRPF8-208ENST00000573716 FAM168BA1KXE4 195 aa7.29□□□□□ -1.24
PRPF8-208ENST00000573716 I3L3M4 83 aa7.29□□□□□ -1.24
PRPF8-208ENST00000573716 GNG4P50150 75 aa7.29□□□□□ -1.24
PRPF8-208ENST00000573716 SMIM15Q7Z3B0 74 aa7.29□□□□□ -1.24
PRPF8-208ENST00000573716 TSKUQ8WUA8 353 aa7.29□□□□□ -1.24
PRPF8-208ENST00000573716 MBD3L1Q8WWY6 194 aa7.29□□□□□ -1.24
PRPF8-208ENST00000573716 TMEM242Q9NWH2 141 aa7.29□□□□□ -1.24
PRPF8-208ENST00000573716 ARPC5O15511 151 aa7.28□□□□□ -1.24
PRPF8-208ENST00000573716 CTRLP40313 264 aa7.28□□□□□ -1.24
PRPF8-208ENST00000573716 FOXA3P55318 350 aaPredicted RBP7.28□□□□□ -1.24
PRPF8-208ENST00000573716 UBE2BP63146 152 aa7.28□□□□□ -1.24
PRPF8-208ENST00000573716 C5orf38Q86SI9 138 aa7.28□□□□□ -1.24
PRPF8-208ENST00000573716 C9orf62Q8N4C0 152 aa7.28□□□□□ -1.24
PRPF8-208ENST00000573716 CDC42SE2Q9NRR3 84 aa7.28□□□□□ -1.24
PRPF8-208ENST00000573716 GNG13Q9P2W3 67 aa7.28□□□□□ -1.24
PRPF8-208ENST00000573716 LINC00862A6NCI5 91 aa7.27□□□□□ -1.25
PRPF8-208ENST00000573716 C1orf196B1AJZ1 125 aa7.27□□□□□ -1.25
PRPF8-208ENST00000573716 TSHBP01222 138 aa7.27□□□□□ -1.25
PRPF8-208ENST00000573716 SPAG11BQ08648 103 aa7.27□□□□□ -1.25
PRPF8-208ENST00000573716 RNASE13Q5GAN3 156 aaKnown RBP7.27□□□□□ -1.25
PRPF8-208ENST00000573716 C11orf52Q96A22 123 aa7.27□□□□□ -1.25
PRPF8-208ENST00000573716 C2orf48Q96LS8 159 aa7.27□□□□□ -1.25
PRPF8-208ENST00000573716 TRAV13-1A0A0B4J241 112 aa7.26□□□□□ -1.25
PRPF8-208ENST00000573716 ESDP10768 282 aa7.26□□□□□ -1.25
PRPF8-208ENST00000573716 TEX261Q6UWH6 196 aa7.26□□□□□ -1.25
PRPF8-208ENST00000573716 TCTE3Q8IZS6 198 aa7.26□□□□□ -1.25
PRPF8-208ENST00000573716 UMAD1C9J7I0 102 aa7.25□□□□□ -1.25
PRPF8-208ENST00000573716 SNAPINO95295 136 aa7.25□□□□□ -1.25
PRPF8-208ENST00000573716 GAGE2EQ4V326 116 aa7.25□□□□□ -1.25
PRPF8-208ENST00000573716 NUDT10Q8NFP7 164 aa7.25□□□□□ -1.25
PRPF8-208ENST00000573716 NUDT11Q96G61 164 aa7.25□□□□□ -1.25
PRPF8-208ENST00000573716 ST20Q9HBF5 79 aa7.25□□□□□ -1.25
PRPF8-208ENST00000573716 MANBALQ9NQG1 85 aa7.25□□□□□ -1.25
PRPF8-208ENST00000573716 GAGE2DQ9UEU5 116 aa7.25□□□□□ -1.25
PRPF8-208ENST00000573716 C7orf77A4D0Y5 90 aa7.24□□□□□ -1.25
PRPF8-208ENST00000573716 CCL20P78556 96 aa7.24□□□□□ -1.25
PRPF8-208ENST00000573716 MRPL52Q86TS9 123 aaKnown RBP7.24□□□□□ -1.25
PRPF8-208ENST00000573716 LINC00518Q8N0U6 118 aa7.24□□□□□ -1.25
PRPF8-208ENST00000573716 IMMP2LQ96T52 175 aa7.24□□□□□ -1.25
PRPF8-208ENST00000573716 RNASE7Q9H1E1 156 aaKnown RBP7.24□□□□□ -1.25
PRPF8-208ENST00000573716 BIN3Q9NQY0 253 aa7.24□□□□□ -1.25
PRPF8-208ENST00000573716 M0QXV9 152 aa7.23□□□□□ -1.25
PRPF8-208ENST00000573716 RNF151Q2KHN1 245 aa7.23□□□□□ -1.25
PRPF8-208ENST00000573716 SMIM12Q96EX1 92 aa7.23□□□□□ -1.25
PRPF8-208ENST00000573716 CNFNQ9BYD5 112 aa7.23□□□□□ -1.25
PRPF8-208ENST00000573716 RPP21Q9H633 154 aaKnown RBP7.23□□□□□ -1.25
PRPF8-208ENST00000573716 CARHSP1Q9Y2V2 147 aaKnown RBP7.23□□□□□ -1.25
PRPF8-208ENST00000573716 TRBV20OR9-2A0A075B6H5 130 aa7.22□□□□□ -1.25
PRPF8-208ENST00000573716 G3V3Q6 166 aa7.22□□□□□ -1.25
PRPF8-208ENST00000573716 GATCO43716 136 aaKnown RBP7.22□□□□□ -1.25
PRPF8-208ENST00000573716 FCER1GP30273 86 aa7.22□□□□□ -1.25
PRPF8-208ENST00000573716 ORAOV1Q8WV07 137 aa7.22□□□□□ -1.25
PRPF8-208ENST00000573716 ANAPC16Q96DE5 110 aa7.22□□□□□ -1.25
PRPF8-208ENST00000573716 MED9Q9NWA0 146 aa7.22□□□□□ -1.25
PRPF8-208ENST00000573716 TRBV6-5A0A0K0K1A5 114 aa7.21□□□□□ -1.26
PRPF8-208ENST00000573716 NDUFA1O15239 70 aa7.21□□□□□ -1.26
PRPF8-208ENST00000573716 C10orf25Q5T742 122 aa7.21□□□□□ -1.26
PRPF8-208ENST00000573716 MRPL35Q9NZE8 188 aaKnown RBP7.21□□□□□ -1.26
PRPF8-208ENST00000573716 SMLR1H3BR10 107 aa7.2□□□□□ -1.26
PRPF8-208ENST00000573716 ANKRD39Q53RE8 183 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms