RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 DEFA3P59666 94 aa4.96□□□□□ -1.62
NPLOC4-211ENST00000573212 TMUB2Q71RG4 321 aa4.96□□□□□ -1.62
NPLOC4-211ENST00000573212 STOML3Q8TAV4 291 aa4.96□□□□□ -1.62
NPLOC4-211ENST00000573212 CHCHD10Q8WYQ3 142 aaPredicted RBP4.96□□□□□ -1.62
NPLOC4-211ENST00000573212 MED28Q9H204 178 aa4.96□□□□□ -1.62
NPLOC4-211ENST00000573212 CYTL1Q9NRR1 136 aa4.96□□□□□ -1.62
NPLOC4-211ENST00000573212 ALG5Q9Y673 324 aa4.96□□□□□ -1.62
NPLOC4-211ENST00000573212 SULT1A2P50226 295 aa4.95□□□□□ -1.62
NPLOC4-211ENST00000573212 AKR1C8PQ5T2L2 129 aa4.95□□□□□ -1.62
NPLOC4-211ENST00000573212 MBD3L1Q8WWY6 194 aa4.95□□□□□ -1.62
NPLOC4-211ENST00000573212 A0A1W2PNN7 141 aa4.94□□□□□ -1.62
NPLOC4-211ENST00000573212 FAM231BA6NCW3 169 aa4.94□□□□□ -1.62
NPLOC4-211ENST00000573212 UBE2L6O14933 153 aa4.94□□□□□ -1.62
NPLOC4-211ENST00000573212 MGPP08493 103 aa4.94□□□□□ -1.62
NPLOC4-211ENST00000573212 DEFA1P59665 94 aa4.94□□□□□ -1.62
NPLOC4-211ENST00000573212 COTL1Q14019 142 aa4.94□□□□□ -1.62
NPLOC4-211ENST00000573212 C19orf71A6NCJ1 209 aa4.93□□□□□ -1.62
NPLOC4-211ENST00000573212 H7C423 109 aa4.93□□□□□ -1.62
NPLOC4-211ENST00000573212 TSHBP01222 138 aa4.93□□□□□ -1.62
NPLOC4-211ENST00000573212 GIPP09681 153 aaPredicted RBP4.93□□□□□ -1.62
NPLOC4-211ENST00000573212 CACNG7P62955 275 aa4.93□□□□□ -1.62
NPLOC4-211ENST00000573212 ZNF664Q8N3J9 261 aa4.93□□□□□ -1.62
NPLOC4-211ENST00000573212 FER1L6-AS1Q8NA97 138 aa4.93□□□□□ -1.62
NPLOC4-211ENST00000573212 PSORS1C2Q9UIG4 136 aa4.93□□□□□ -1.62
NPLOC4-211ENST00000573212 IGHV1-58A0A0C4DH39 117 aa4.92□□□□□ -1.62
NPLOC4-211ENST00000573212 IGKV3OR2-268A0A0C4DH90 116 aa4.92□□□□□ -1.62
NPLOC4-211ENST00000573212 F2Z2F3 143 aa4.92□□□□□ -1.62
NPLOC4-211ENST00000573212 G3V3Q6 166 aa4.92□□□□□ -1.62
NPLOC4-211ENST00000573212 NTF3P20783 257 aa4.92□□□□□ -1.62
NPLOC4-211ENST00000573212 RPS20P60866 119 aaKnown RBP4.92□□□□□ -1.62
NPLOC4-211ENST00000573212 GATD1Q8NB37 220 aa4.92□□□□□ -1.62
NPLOC4-211ENST00000573212 OR5A1Q8NGJ0 315 aa4.92□□□□□ -1.62
NPLOC4-211ENST00000573212 LINC00526Q96FQ7 95 aa4.92□□□□□ -1.62
NPLOC4-211ENST00000573212 PKIGQ9Y2B9 76 aa4.92□□□□□ -1.62
NPLOC4-211ENST00000573212 NCR2O95944 276 aa4.91□□□□□ -1.62
NPLOC4-211ENST00000573212 TRGC1P0CF51 173 aa4.91□□□□□ -1.62
NPLOC4-211ENST00000573212 RPL35P42766 123 aaKnown RBP4.91□□□□□ -1.62
NPLOC4-211ENST00000573212 LYZL1Q6UWQ5 148 aa4.91□□□□□ -1.62
NPLOC4-211ENST00000573212 C9orf62Q8N4C0 152 aa4.91□□□□□ -1.62
NPLOC4-211ENST00000573212 OR2D3Q8NGH3 330 aa4.91□□□□□ -1.62
NPLOC4-211ENST00000573212 SFT2D1Q8WV19 159 aa4.91□□□□□ -1.62
NPLOC4-211ENST00000573212 CARD19Q96LW7 228 aa4.91□□□□□ -1.62
NPLOC4-211ENST00000573212 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.9□□□□□ -1.63
NPLOC4-211ENST00000573212 FXYD6-FXYD2A0A087WZ82 144 aa4.9□□□□□ -1.63
NPLOC4-211ENST00000573212 LINC00959A0A1B0GUT2 108 aa4.9□□□□□ -1.63
NPLOC4-211ENST00000573212 IGKV2-29A2NJV5 120 aaPredicted RBP4.9□□□□□ -1.63
NPLOC4-211ENST00000573212 FGF6P10767 208 aa4.9□□□□□ -1.63
NPLOC4-211ENST00000573212 SYCNQ0VAF6 134 aa4.9□□□□□ -1.63
NPLOC4-211ENST00000573212 KCNRGQ8N5I3 272 aa4.9□□□□□ -1.63
NPLOC4-211ENST00000573212 C11orf52Q96A22 123 aa4.9□□□□□ -1.63
NPLOC4-211ENST00000573212 CNFNQ9BYD5 112 aa4.9□□□□□ -1.63
NPLOC4-211ENST00000573212 FAT4Q6V0I7 4981 aa4.89□□□□□ -1.63
NPLOC4-211ENST00000573212 A0A087WZ39 114 aa4.89□□□□□ -1.63
NPLOC4-211ENST00000573212 LOC107984640A0A0U1RRK4 108 aa4.89□□□□□ -1.63
NPLOC4-211ENST00000573212 CCL25O15444 150 aa4.89□□□□□ -1.63
NPLOC4-211ENST00000573212 PFDN1O60925 122 aa4.89□□□□□ -1.63
NPLOC4-211ENST00000573212 ESDP10768 282 aa4.89□□□□□ -1.63
NPLOC4-211ENST00000573212 ZNF25P17030 456 aaPredicted RBP4.89□□□□□ -1.63
NPLOC4-211ENST00000573212 XCL1P47992 114 aa4.89□□□□□ -1.63
NPLOC4-211ENST00000573212 AMMECR1LQ6DCA0 310 aa4.89□□□□□ -1.63
NPLOC4-211ENST00000573212 RNASEKQ6P5S7 137 aaKnown RBP4.89□□□□□ -1.63
NPLOC4-211ENST00000573212 ERASQ7Z444 233 aa4.89□□□□□ -1.63
NPLOC4-211ENST00000573212 NUP35Q8NFH5 326 aa4.89□□□□□ -1.63
NPLOC4-211ENST00000573212 TRAV26-2A0A0B4J265 109 aa4.88□□□□□ -1.63
NPLOC4-211ENST00000573212 RAB19A4D1S5 217 aa4.88□□□□□ -1.63
NPLOC4-211ENST00000573212 UMAD1C9J7I0 102 aa4.88□□□□□ -1.63
NPLOC4-211ENST00000573212 C9orf116Q5BN46 136 aaPredicted RBP4.88□□□□□ -1.63
NPLOC4-211ENST00000573212 C1orf137Q5JT78 98 aa4.88□□□□□ -1.63
NPLOC4-211ENST00000573212 FAM213BQ8TBF2 198 aa4.88□□□□□ -1.63
NPLOC4-211ENST00000573212 RPL39LQ96EH5 51 aaKnown RBP4.88□□□□□ -1.63
NPLOC4-211ENST00000573212 SMIM12Q96EX1 92 aa4.88□□□□□ -1.63
NPLOC4-211ENST00000573212 CDC42SE2Q9NRR3 84 aa4.88□□□□□ -1.63
NPLOC4-211ENST00000573212 MUC17Q685J3 4493 aa4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 IGLV4-69A0A075B6H9 119 aa4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 TRBV6-5A0A0K0K1A5 114 aa4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 A0A1B0GV50 99 aa4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 XKRY2A2RUG3 117 aa4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 SDHAF1A6NFY7 115 aa4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 IFNA1P01562 189 aa4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 APCSP02743 223 aa4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 MT-ND6P03923 174 aa4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 IGLV7-43P04211 117 aa4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 KRTAP1-4P0C5Y4 121 aa4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 CTRLP40313 264 aa4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 CCL20P78556 96 aa4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 CENPWQ5EE01 88 aa4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 PHF5AQ7RTV0 110 aaKnown RBP4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 DIRC1Q969H9 104 aa4.87□□□□□ -1.63
NPLOC4-211ENST00000573212 IGLV1-50A0A075B6I6 118 aa4.86□□□□□ -1.63
NPLOC4-211ENST00000573212 A0A0U1RQV1 116 aa4.86□□□□□ -1.63
NPLOC4-211ENST00000573212 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.86□□□□□ -1.63
NPLOC4-211ENST00000573212 I3L3M4 83 aa4.86□□□□□ -1.63
NPLOC4-211ENST00000573212 ARPC5O15511 151 aa4.86□□□□□ -1.63
NPLOC4-211ENST00000573212 BCL2P10415 239 aa4.86□□□□□ -1.63
NPLOC4-211ENST00000573212 FOXA3P55318 350 aaPredicted RBP4.86□□□□□ -1.63
NPLOC4-211ENST00000573212 MEF2BQ02080 365 aaPredicted RBP4.86□□□□□ -1.63
NPLOC4-211ENST00000573212 SS18Q15532 418 aa4.86□□□□□ -1.63
NPLOC4-211ENST00000573212 MRPL52Q86TS9 123 aaKnown RBP4.86□□□□□ -1.63
NPLOC4-211ENST00000573212 KRTAP11-1Q8IUC1 163 aa4.86□□□□□ -1.63
NPLOC4-211ENST00000573212 ISOC2Q96AB3 205 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms