RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 SMAGPQ0VAQ4 97 aa9.53□□□□□ -0.88
LITAF-208ENST00000571627 RNASEKQ6P5S7 137 aaKnown RBP9.53□□□□□ -0.88
LITAF-208ENST00000571627 ORMDL3Q8N138 153 aa9.53□□□□□ -0.88
LITAF-208ENST00000571627 TMEM101Q96IK0 257 aa9.53□□□□□ -0.88
LITAF-208ENST00000571627 C7orf77A4D0Y5 90 aa9.52□□□□□ -0.89
LITAF-208ENST00000571627 EPM2AB3EWF7 344 aa9.52□□□□□ -0.89
LITAF-208ENST00000571627 S100PP25815 95 aa9.52□□□□□ -0.89
LITAF-208ENST00000571627 KRTAP26-1Q6PEX3 210 aa9.52□□□□□ -0.89
LITAF-208ENST00000571627 TMEM136Q6ZRR5 245 aa9.52□□□□□ -0.89
LITAF-208ENST00000571627 USP17L23D6RBM5 183 aa9.51□□□□□ -0.89
LITAF-208ENST00000571627 RHEBQ15382 184 aa9.51□□□□□ -0.89
LITAF-208ENST00000571627 C14orf177Q52M58 125 aa9.51□□□□□ -0.89
LITAF-208ENST00000571627 PRELID3AQ96N28 172 aa9.51□□□□□ -0.89
LITAF-208ENST00000571627 LAMTOR2Q9Y2Q5 125 aa9.51□□□□□ -0.89
LITAF-208ENST00000571627 NPYP01303 97 aa9.5□□□□□ -0.89
LITAF-208ENST00000571627 Q5VSD8 79 aa9.5□□□□□ -0.89
LITAF-208ENST00000571627 MRPL52Q86TS9 123 aaKnown RBP9.5□□□□□ -0.89
LITAF-208ENST00000571627 CLRN3Q8NCR9 226 aa9.5□□□□□ -0.89
LITAF-208ENST00000571627 OR5A1Q8NGJ0 315 aa9.5□□□□□ -0.89
LITAF-208ENST00000571627 TMEM18Q96B42 140 aa9.5□□□□□ -0.89
LITAF-208ENST00000571627 SMIM2Q9BVW6 85 aa9.5□□□□□ -0.89
LITAF-208ENST00000571627 VPS13BQ7Z7G8 4022 aa9.5□□□□□ -0.89
LITAF-208ENST00000571627 NDUFA5Q16718 116 aa9.49□□□□□ -0.89
LITAF-208ENST00000571627 SRRM2Q9UQ35 2752 aaKnown RBP9.48□□□□□ -0.89
LITAF-208ENST00000571627 IGKV3OR2-268A0A0C4DH90 116 aa9.48□□□□□ -0.89
LITAF-208ENST00000571627 PRSS1P07477 247 aa9.48□□□□□ -0.89
LITAF-208ENST00000571627 DGAT2L7PQ6IED9 249 aa9.48□□□□□ -0.89
LITAF-208ENST00000571627 Q6ZSA8 131 aa9.48□□□□□ -0.89
LITAF-208ENST00000571627 RPS10P5Q9NQ39 176 aa9.48□□□□□ -0.89
LITAF-208ENST00000571627 PRSS47A8MTI9 375 aa9.47□□□□□ -0.89
LITAF-208ENST00000571627 MAP1LC3AQ9H492 121 aa9.47□□□□□ -0.89
LITAF-208ENST00000571627 CSDC2Q9Y534 153 aaKnown RBP9.47□□□□□ -0.89
LITAF-208ENST00000571627 RAB5AP20339 215 aa9.46□□□□□ -0.9
LITAF-208ENST00000571627 COX19Q49B96 90 aa9.46□□□□□ -0.9
LITAF-208ENST00000571627 SVBPQ8N300 66 aa9.46□□□□□ -0.9
LITAF-208ENST00000571627 ZNF664Q8N3J9 261 aa9.46□□□□□ -0.9
LITAF-208ENST00000571627 TIMM21Q9BVV7 248 aa9.46□□□□□ -0.9
LITAF-208ENST00000571627 CDC42SE2Q9NRR3 84 aa9.46□□□□□ -0.9
LITAF-208ENST00000571627 SNAPINO95295 136 aa9.45□□□□□ -0.9
LITAF-208ENST00000571627 APOC3P02656 99 aa9.45□□□□□ -0.9
LITAF-208ENST00000571627 GNB1LQ9BYB4 327 aa9.45□□□□□ -0.9
LITAF-208ENST00000571627 UBE2D4Q9Y2X8 147 aa9.45□□□□□ -0.9
LITAF-208ENST00000571627 GAGE12HA6NDE8 117 aa9.44□□□□□ -0.9
LITAF-208ENST00000571627 CHCHD10Q8WYQ3 142 aaPredicted RBP9.44□□□□□ -0.9
LITAF-208ENST00000571627 LOC389332A0A1B0GUA5 103 aa9.43□□□□□ -0.9
LITAF-208ENST00000571627 LINC00959A0A1B0GUT2 108 aa9.43□□□□□ -0.9
LITAF-208ENST00000571627 SS18Q15532 418 aa9.43□□□□□ -0.9
LITAF-208ENST00000571627 CFAP161Q6P656 301 aa9.43□□□□□ -0.9
LITAF-208ENST00000571627 SCXQ7RTU7 201 aa9.43□□□□□ -0.9
LITAF-208ENST00000571627 SPANXA1Q9NS26 97 aa9.43□□□□□ -0.9
LITAF-208ENST00000571627 hDV102S1A0JD36 115 aa9.42□□□□□ -0.9
LITAF-208ENST00000571627 FAM229AH3BQW9 127 aa9.42□□□□□ -0.9
LITAF-208ENST00000571627 K7EMI3 77 aa9.42□□□□□ -0.9
LITAF-208ENST00000571627 CCL25O15444 150 aa9.42□□□□□ -0.9
LITAF-208ENST00000571627 MT-ND6P03923 174 aa9.42□□□□□ -0.9
LITAF-208ENST00000571627 Q8N8P6 123 aa9.42□□□□□ -0.9
LITAF-208ENST00000571627 NXT2Q9NPJ8 142 aaKnown RBP9.42□□□□□ -0.9
LITAF-208ENST00000571627 INAFM2P0DMQ5 153 aa9.41□□□□□ -0.9
LITAF-208ENST00000571627 FLG2Q5D862 2391 aaPredicted RBP9.4□□□□□ -0.9
LITAF-208ENST00000571627 C1orf196B1AJZ1 125 aa9.4□□□□□ -0.9
LITAF-208ENST00000571627 RPL39P62891 51 aaKnown RBP9.4□□□□□ -0.9
LITAF-208ENST00000571627 KIAA1644Q3SXP7 199 aa9.4□□□□□ -0.9
LITAF-208ENST00000571627 ORMDL2Q53FV1 153 aa9.4□□□□□ -0.9
LITAF-208ENST00000571627 LINC00528Q8N1L1 170 aa9.4□□□□□ -0.9
LITAF-208ENST00000571627 CHAC1Q9BUX1 264 aa9.4□□□□□ -0.9
LITAF-208ENST00000571627 XCL1P47992 114 aa9.39□□□□□ -0.91
LITAF-208ENST00000571627 MRPS36P82909 103 aaKnown RBP9.39□□□□□ -0.91
LITAF-208ENST00000571627 FOXI1Q12951 378 aa9.39□□□□□ -0.91
LITAF-208ENST00000571627 CD164L2Q6UWJ8 174 aa9.39□□□□□ -0.91
LITAF-208ENST00000571627 Q6ZUT4 128 aa9.39□□□□□ -0.91
LITAF-208ENST00000571627 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
LITAF-208ENST00000571627 AP5S1Q9NUS5 200 aa9.39□□□□□ -0.91
LITAF-208ENST00000571627 G0S2P27469 103 aa9.38□□□□□ -0.91
LITAF-208ENST00000571627 IFI27P40305 119 aaPredicted RBP9.38□□□□□ -0.91
LITAF-208ENST00000571627 C9orf163Q8N9P6 203 aa9.38□□□□□ -0.91
LITAF-208ENST00000571627 CIRBP-AS1Q8TBR5 109 aa9.38□□□□□ -0.91
LITAF-208ENST00000571627 PYGO1Q9Y3Y4 419 aa9.38□□□□□ -0.91
LITAF-208ENST00000571627 SLPIP03973 132 aa9.37□□□□□ -0.91
LITAF-208ENST00000571627 CNBPP62633 177 aaKnown RBP9.37□□□□□ -0.91
LITAF-208ENST00000571627 FABP9Q0Z7S8 132 aa9.37□□□□□ -0.91
LITAF-208ENST00000571627 HIGD2BQ4VC39 106 aa9.37□□□□□ -0.91
LITAF-208ENST00000571627 RNASE13Q5GAN3 156 aaKnown RBP9.37□□□□□ -0.91
LITAF-208ENST00000571627 MRPL18Q9H0U6 180 aaKnown RBP9.37□□□□□ -0.91
LITAF-208ENST00000571627 CYSLTR1Q9Y271 337 aa9.37□□□□□ -0.91
LITAF-208ENST00000571627 MYCBP2O75592 4640 aa9.36□□□□□ -0.91
LITAF-208ENST00000571627 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.36□□□□□ -0.91
LITAF-208ENST00000571627 TGIF2-C20orf24A0A0A6YYL0 155 aa9.36□□□□□ -0.91
LITAF-208ENST00000571627 TRAV13-1A0A0B4J241 112 aa9.36□□□□□ -0.91
LITAF-208ENST00000571627 ALKBH7Q9BT30 221 aaPredicted RBP9.36□□□□□ -0.91
LITAF-208ENST00000571627 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.36□□□□□ -0.91
LITAF-208ENST00000571627 IGHV1-58A0A0C4DH39 117 aa9.35□□□□□ -0.91
LITAF-208ENST00000571627 PANO1I0J062 215 aa9.35□□□□□ -0.91
LITAF-208ENST00000571627 C2orf66Q6UXQ4 117 aa9.35□□□□□ -0.91
LITAF-208ENST00000571627 SDIM1Q6ZPB5 146 aa9.35□□□□□ -0.91
LITAF-208ENST00000571627 PRSS3P2Q8NHM4 247 aa9.35□□□□□ -0.91
LITAF-208ENST00000571627 GVQW2A0A096LPI5 108 aaPredicted RBP9.34□□□□□ -0.91
LITAF-208ENST00000571627 NPSP0C0P6 89 aa9.34□□□□□ -0.91
LITAF-208ENST00000571627 FAM104AQ969W3 186 aa9.34□□□□□ -0.91
LITAF-208ENST00000571627 TRAPPC1Q9Y5R8 145 aa9.34□□□□□ -0.91
LITAF-208ENST00000571627 IFITM10A6NMD0 228 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms