RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 PLXND1Q9Y4D7 1925 aa5.24□□□□□ -1.57
CNOT1-216ENST00000569240 C4orf3Q8WVX3 66 aa5.24□□□□□ -1.57
CNOT1-216ENST00000569240 DEFB112Q30KQ8 113 aa5.24□□□□□ -1.57
CNOT1-216ENST00000569240 Q6ZVQ6 151 aa5.24□□□□□ -1.57
CNOT1-216ENST00000569240 TET1Q8NFU7 2136 aa5.23□□□□□ -1.57
CNOT1-216ENST00000569240 SMIM1B2RUZ4 78 aa5.23□□□□□ -1.57
CNOT1-216ENST00000569240 LINC01547P58512 204 aaPredicted RBP5.23□□□□□ -1.57
CNOT1-216ENST00000569240 IGKV2D-24A0A075B6R9 120 aa5.23□□□□□ -1.57
CNOT1-216ENST00000569240 COL4A6Q14031 1691 aa5.23□□□□□ -1.57
CNOT1-216ENST00000569240 LOC110117498A0A087WWA1 95 aa5.23□□□□□ -1.57
CNOT1-216ENST00000569240 REG3AQ06141 175 aa5.23□□□□□ -1.57
CNOT1-216ENST00000569240 SOSTDC1Q6X4U4 206 aa5.23□□□□□ -1.57
CNOT1-216ENST00000569240 CHCHD10Q8WYQ3 142 aaPredicted RBP5.23□□□□□ -1.57
CNOT1-216ENST00000569240 LINC00208Q96KT6 92 aa5.23□□□□□ -1.57
CNOT1-216ENST00000569240 A6NDX4 124 aa5.23□□□□□ -1.57
CNOT1-216ENST00000569240 KLKP1Q107X0 134 aa5.23□□□□□ -1.57
CNOT1-216ENST00000569240 CDC42SE2Q9NRR3 84 aa5.23□□□□□ -1.57
CNOT1-216ENST00000569240 DOCK10Q96BY6 2186 aa5.23□□□□□ -1.57
CNOT1-216ENST00000569240 A0A087WVE0 104 aa5.23□□□□□ -1.57
CNOT1-216ENST00000569240 SLPIP03973 132 aa5.23□□□□□ -1.57
CNOT1-216ENST00000569240 DIDO1Q9BTC0 2240 aaKnown RBP5.23□□□□□ -1.57
CNOT1-216ENST00000569240 LINC00242Q5T6M2 205 aa5.22□□□□□ -1.57
CNOT1-216ENST00000569240 RUSC1-AS1Q66K80 236 aa5.22□□□□□ -1.57
CNOT1-216ENST00000569240 APC2O95996 2303 aa5.22□□□□□ -1.57
CNOT1-216ENST00000569240 C9orf66Q5T8R8 295 aa5.22□□□□□ -1.57
CNOT1-216ENST00000569240 ZNF706Q9Y5V0 76 aaPredicted RBP5.22□□□□□ -1.57
CNOT1-216ENST00000569240 NUP210Q8TEM1 1887 aaPredicted RBP5.22□□□□□ -1.57
CNOT1-216ENST00000569240 ANAPC1Q9H1A4 1944 aa5.22□□□□□ -1.57
CNOT1-216ENST00000569240 KIF26AQ9ULI4 1882 aaPredicted RBP5.22□□□□□ -1.57
CNOT1-216ENST00000569240 IGLV5-39A0A0G2JS06 123 aa5.22□□□□□ -1.57
CNOT1-216ENST00000569240 C4orf26Q17RF5 130 aa5.22□□□□□ -1.57
CNOT1-216ENST00000569240 ELOF1P60002 83 aaKnown RBP5.21□□□□□ -1.57
CNOT1-216ENST00000569240 TANC2Q9HCD6 1990 aa5.21□□□□□ -1.57
CNOT1-216ENST00000569240 CEMP1Q6PRD7 247 aaPredicted RBP5.21□□□□□ -1.58
CNOT1-216ENST00000569240 DENND4CQ5VZ89 1909 aa5.21□□□□□ -1.58
CNOT1-216ENST00000569240 SPTBN1Q01082 2364 aaKnown RBP5.21□□□□□ -1.58
CNOT1-216ENST00000569240 MED12LQ86YW9 2145 aa5.21□□□□□ -1.58
CNOT1-216ENST00000569240 WISP2O76076 250 aa5.21□□□□□ -1.58
CNOT1-216ENST00000569240 TSPEAR-AS2P59090 65 aa5.21□□□□□ -1.58
CNOT1-216ENST00000569240 C11orf21Q9P2W6 132 aa5.21□□□□□ -1.58
CNOT1-216ENST00000569240 MAP6D1Q9H9H5 199 aa5.21□□□□□ -1.58
CNOT1-216ENST00000569240 SEM1Q6ZVN7 128 aa5.21□□□□□ -1.58
CNOT1-216ENST00000569240 TP53AIP1Q9HCN2 124 aa5.21□□□□□ -1.58
CNOT1-216ENST00000569240 HELZP42694 1942 aaKnown RBP5.21□□□□□ -1.58
CNOT1-216ENST00000569240 SZT2Q5T011 3432 aa5.21□□□□□ -1.58
CNOT1-216ENST00000569240 EGFEM1PQ0D2K5 195 aa5.2□□□□□ -1.58
CNOT1-216ENST00000569240 IGLV5-45A0A087WSX0 123 aa5.2□□□□□ -1.58
CNOT1-216ENST00000569240 AKAP6Q13023 2319 aa5.2□□□□□ -1.58
CNOT1-216ENST00000569240 TNFRSF13BO14836 293 aaPredicted RBP5.2□□□□□ -1.58
CNOT1-216ENST00000569240 RPL37AP8A6NKH3 93 aa5.2□□□□□ -1.58
CNOT1-216ENST00000569240 SCXQ7RTU7 201 aa5.2□□□□□ -1.58
CNOT1-216ENST00000569240 TMEM105Q8N8V8 129 aa5.2□□□□□ -1.58
CNOT1-216ENST00000569240 NCOA6Q14686 2063 aaPredicted RBP5.2□□□□□ -1.58
CNOT1-216ENST00000569240 DAZAP2Q15038 168 aaPredicted RBP5.2□□□□□ -1.58
CNOT1-216ENST00000569240 SERTAD4-AS1Q5TG53 156 aa5.2□□□□□ -1.58
CNOT1-216ENST00000569240 PTPRZ1P23471 2315 aaPredicted RBP5.19□□□□□ -1.58
CNOT1-216ENST00000569240 LINC00575Q6W349 94 aa5.19□□□□□ -1.58
CNOT1-216ENST00000569240 LINC00959A0A1B0GUT2 108 aa5.19□□□□□ -1.58
CNOT1-216ENST00000569240 CLPSL2Q6UWE3 100 aa5.19□□□□□ -1.58
CNOT1-216ENST00000569240 ATP11AUNQ6ZP68 121 aa5.19□□□□□ -1.58
CNOT1-216ENST00000569240 POLEQ07864 2286 aa5.19□□□□□ -1.58
CNOT1-216ENST00000569240 UNQ9165/PRO28630Q6UXU0 137 aa5.19□□□□□ -1.58
CNOT1-216ENST00000569240 ADAMTS9Q9P2N4 1935 aa5.19□□□□□ -1.58
CNOT1-216ENST00000569240 C1orf158Q8N1D5 194 aa5.18□□□□□ -1.58
CNOT1-216ENST00000569240 CEP290O15078 2479 aa5.18□□□□□ -1.58
CNOT1-216ENST00000569240 PRM2P04554 102 aa5.18□□□□□ -1.58
CNOT1-216ENST00000569240 FAM19A1Q7Z5A9 133 aa5.18□□□□□ -1.58
CNOT1-216ENST00000569240 LINC00269Q8N2A0 174 aa5.18□□□□□ -1.58
CNOT1-216ENST00000569240 PCNX2A6NKB5 2137 aa5.17□□□□□ -1.58
CNOT1-216ENST00000569240 C8orf87E5RJ46 101 aa5.17□□□□□ -1.58
CNOT1-216ENST00000569240 LINC00482Q8N8I6 264 aa5.17□□□□□ -1.58
CNOT1-216ENST00000569240 PLCE1Q9P212 2302 aa5.17□□□□□ -1.58
CNOT1-216ENST00000569240 SYCNQ0VAF6 134 aa5.17□□□□□ -1.58
CNOT1-216ENST00000569240 ADAMTSL4-AS1Q5T5F5 129 aa5.17□□□□□ -1.58
CNOT1-216ENST00000569240 C1orf229Q6ZS94 237 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-216ENST00000569240 GTF3C1Q12789 2109 aa5.17□□□□□ -1.58
CNOT1-216ENST00000569240 A0A087WYN8 130 aa5.17□□□□□ -1.58
CNOT1-216ENST00000569240 RETNLBQ9BQ08 111 aa5.17□□□□□ -1.58
CNOT1-216ENST00000569240 KLK12Q9UKR0 248 aa5.16□□□□□ -1.58
CNOT1-216ENST00000569240 MGAMO43451 1857 aa5.16□□□□□ -1.58
CNOT1-216ENST00000569240 IGLV10-54A0A075B6I4 117 aa5.16□□□□□ -1.58
CNOT1-216ENST00000569240 A0A1B0GUV1 79 aa5.16□□□□□ -1.58
CNOT1-216ENST00000569240 PSPHP1O15172 72 aa5.16□□□□□ -1.58
CNOT1-216ENST00000569240 DOCK7Q96N67 2140 aa5.16□□□□□ -1.58
CNOT1-216ENST00000569240 C1orf137Q5JT78 98 aa5.16□□□□□ -1.58
CNOT1-216ENST00000569240 FER1L5A0AVI2 2057 aa5.16□□□□□ -1.58
CNOT1-216ENST00000569240 VCANP13611 3396 aa5.16□□□□□ -1.58
CNOT1-216ENST00000569240 HILS1P60008 231 aa5.16□□□□□ -1.58
CNOT1-216ENST00000569240 LELP1Q5T871 98 aa5.16□□□□□ -1.58
CNOT1-216ENST00000569240 WFDC10BQ8IUB3 73 aa5.16□□□□□ -1.58
CNOT1-216ENST00000569240 KTN1-AS1Q86SY8 53 aa5.15□□□□□ -1.58
CNOT1-216ENST00000569240 C6orf223Q8N319 242 aa5.15□□□□□ -1.58
CNOT1-216ENST00000569240 ROS1P08922 2347 aa5.15□□□□□ -1.58
CNOT1-216ENST00000569240 ZNF407Q9C0G0 2248 aa5.15□□□□□ -1.58
CNOT1-216ENST00000569240 PRB2P02812 416 aaPredicted RBP5.15□□□□□ -1.58
CNOT1-216ENST00000569240 C10orf25Q5T742 122 aa5.15□□□□□ -1.58
CNOT1-216ENST00000569240 SPTAN1Q13813 2472 aaKnown RBP5.15□□□□□ -1.58
CNOT1-216ENST00000569240 Q6ZTI0 123 aa5.15□□□□□ -1.59
CNOT1-216ENST00000569240 C3orf84H3BNL1 204 aa5.15□□□□□ -1.59
CNOT1-216ENST00000569240 TMEM131Q92545 1883 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms