RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 G3V3Q6 166 aa5.12□□□□□ -1.59
SMG1-216ENST00000569122 I3L3M4 83 aa5.12□□□□□ -1.59
SMG1-216ENST00000569122 ZNF861PO60384 105 aa5.12□□□□□ -1.59
SMG1-216ENST00000569122 IGLC6P0CF74 106 aa5.12□□□□□ -1.59
SMG1-216ENST00000569122 CRYGAP11844 174 aa5.12□□□□□ -1.59
SMG1-216ENST00000569122 TMEM241Q24JQ0 296 aa5.12□□□□□ -1.59
SMG1-216ENST00000569122 Q6ZNX1 250 aa5.12□□□□□ -1.59
SMG1-216ENST00000569122 SMIM15Q7Z3B0 74 aa5.12□□□□□ -1.59
SMG1-216ENST00000569122 TYMSOSQ8TAI1 123 aa5.12□□□□□ -1.59
SMG1-216ENST00000569122 RPP21Q9H633 154 aaKnown RBP5.12□□□□□ -1.59
SMG1-216ENST00000569122 MRPL35Q9NZE8 188 aaKnown RBP5.12□□□□□ -1.59
SMG1-216ENST00000569122 PMCHP20382 165 aa5.11□□□□□ -1.59
SMG1-216ENST00000569122 TMUB2Q71RG4 321 aa5.11□□□□□ -1.59
SMG1-216ENST00000569122 MRPL52Q86TS9 123 aaKnown RBP5.11□□□□□ -1.59
SMG1-216ENST00000569122 GATD1Q8NB37 220 aa5.11□□□□□ -1.59
SMG1-216ENST00000569122 MRAP2Q96G30 205 aa5.11□□□□□ -1.59
SMG1-216ENST00000569122 OPRPNQ99935 248 aaPredicted RBP5.11□□□□□ -1.59
SMG1-216ENST00000569122 MARVELD1Q9BSK0 173 aa5.11□□□□□ -1.59
SMG1-216ENST00000569122 CDC42SE2Q9NRR3 84 aa5.11□□□□□ -1.59
SMG1-216ENST00000569122 IGLV7-46A0A075B6I9 117 aa5.1□□□□□ -1.59
SMG1-216ENST00000569122 SDHAF1A6NFY7 115 aa5.1□□□□□ -1.59
SMG1-216ENST00000569122 PAGE4O60829 102 aa5.1□□□□□ -1.59
SMG1-216ENST00000569122 IFNA1P01562 189 aa5.1□□□□□ -1.59
SMG1-216ENST00000569122 TLX1NBP0CAT3 122 aa5.1□□□□□ -1.59
SMG1-216ENST00000569122 SPAG11BQ08648 103 aa5.1□□□□□ -1.59
SMG1-216ENST00000569122 TWIST1Q15672 202 aa5.1□□□□□ -1.59
SMG1-216ENST00000569122 OR10D4PQ8NGN7 298 aa5.1□□□□□ -1.59
SMG1-216ENST00000569122 BIN3Q9NQY0 253 aa5.1□□□□□ -1.59
SMG1-216ENST00000569122 SCO2A0A1W2PP80 73 aa5.09□□□□□ -1.59
SMG1-216ENST00000569122 M0QXV9 152 aa5.09□□□□□ -1.59
SMG1-216ENST00000569122 NDUFA1O15239 70 aa5.09□□□□□ -1.59
SMG1-216ENST00000569122 NUPR1O60356 82 aa5.09□□□□□ -1.59
SMG1-216ENST00000569122 SRSF3P84103 164 aaKnown RBP5.09□□□□□ -1.59
SMG1-216ENST00000569122 RPL7L1Q6DKI1 246 aaKnown RBP5.09□□□□□ -1.59
SMG1-216ENST00000569122 LYZL1Q6UWQ5 148 aa5.09□□□□□ -1.59
SMG1-216ENST00000569122 LINC00299Q6ZSB3 139 aa5.09□□□□□ -1.59
SMG1-216ENST00000569122 FAM19A5Q7Z5A7 132 aaPredicted RBP5.09□□□□□ -1.59
SMG1-216ENST00000569122 C9orf62Q8N4C0 152 aa5.09□□□□□ -1.59
SMG1-216ENST00000569122 S100ZQ8WXG8 99 aa5.09□□□□□ -1.59
SMG1-216ENST00000569122 ALG5Q9Y673 324 aa5.09□□□□□ -1.59
SMG1-216ENST00000569122 MUC17Q685J3 4493 aa5.09□□□□□ -1.6
SMG1-216ENST00000569122 GHRHP01286 108 aa5.08□□□□□ -1.6
SMG1-216ENST00000569122 LINC00173Q6ZV60 143 aa5.08□□□□□ -1.6
SMG1-216ENST00000569122 SMIM12Q96EX1 92 aa5.08□□□□□ -1.6
SMG1-216ENST00000569122 CSDC2Q9Y534 153 aaKnown RBP5.08□□□□□ -1.6
SMG1-216ENST00000569122 FAM168BA1KXE4 195 aa5.07□□□□□ -1.6
SMG1-216ENST00000569122 RPL35P42766 123 aaKnown RBP5.07□□□□□ -1.6
SMG1-216ENST00000569122 RPL28P46779 137 aaKnown RBP5.07□□□□□ -1.6
SMG1-216ENST00000569122 KRTAP11-1Q8IUC1 163 aa5.07□□□□□ -1.6
SMG1-216ENST00000569122 CNFNQ9BYD5 112 aa5.07□□□□□ -1.6
SMG1-216ENST00000569122 CYTL1Q9NRR1 136 aa5.07□□□□□ -1.6
SMG1-216ENST00000569122 TRBV6-5A0A0K0K1A5 114 aa5.06□□□□□ -1.6
SMG1-216ENST00000569122 C7orf77A4D0Y5 90 aa5.06□□□□□ -1.6
SMG1-216ENST00000569122 GAGE2EQ4V326 116 aa5.06□□□□□ -1.6
SMG1-216ENST00000569122 LBHQ53QV2 105 aaPredicted RBP5.06□□□□□ -1.6
SMG1-216ENST00000569122 C5orf38Q86SI9 138 aa5.06□□□□□ -1.6
SMG1-216ENST00000569122 LINC00337Q8N6G1 96 aa5.06□□□□□ -1.6
SMG1-216ENST00000569122 SFT2D1Q8WV19 159 aa5.06□□□□□ -1.6
SMG1-216ENST00000569122 RPL39LQ96EH5 51 aaKnown RBP5.06□□□□□ -1.6
SMG1-216ENST00000569122 SMDT1Q9H4I9 107 aa5.06□□□□□ -1.6
SMG1-216ENST00000569122 ST20Q9HBF5 79 aa5.06□□□□□ -1.6
SMG1-216ENST00000569122 GAGE2DQ9UEU5 116 aa5.06□□□□□ -1.6
SMG1-216ENST00000569122 A0A087X002 238 aa5.05□□□□□ -1.6
SMG1-216ENST00000569122 TRAV13-1A0A0B4J241 112 aa5.05□□□□□ -1.6
SMG1-216ENST00000569122 UPK1BO75841 260 aa5.05□□□□□ -1.6
SMG1-216ENST00000569122 TSHBP01222 138 aa5.05□□□□□ -1.6
SMG1-216ENST00000569122 CTRLP40313 264 aa5.05□□□□□ -1.6
SMG1-216ENST00000569122 DEFA1P59665 94 aa5.05□□□□□ -1.6
SMG1-216ENST00000569122 KCNRGQ8N5I3 272 aa5.05□□□□□ -1.6
SMG1-216ENST00000569122 LINC00304Q8N9R0 145 aa5.05□□□□□ -1.6
SMG1-216ENST00000569122 RETNLBQ9BQ08 111 aa5.05□□□□□ -1.6
SMG1-216ENST00000569122 PPDPFQ9H3Y8 114 aa5.05□□□□□ -1.6
SMG1-216ENST00000569122 NDUFA13Q9P0J0 144 aa5.05□□□□□ -1.6
SMG1-216ENST00000569122 LORP23490 312 aaPredicted RBP5.04□□□□□ -1.6
SMG1-216ENST00000569122 GNG4P50150 75 aa5.04□□□□□ -1.6
SMG1-216ENST00000569122 CENPWQ5EE01 88 aa5.04□□□□□ -1.6
SMG1-216ENST00000569122 ORAOV1Q8WV07 137 aa5.04□□□□□ -1.6
SMG1-216ENST00000569122 MBD3L1Q8WWY6 194 aa5.04□□□□□ -1.6
SMG1-216ENST00000569122 TMEM18Q96B42 140 aa5.04□□□□□ -1.6
SMG1-216ENST00000569122 UMAD1C9J7I0 102 aa5.03□□□□□ -1.6
SMG1-216ENST00000569122 FCER1GP30273 86 aa5.03□□□□□ -1.6
SMG1-216ENST00000569122 SEC61BP60468 96 aaKnown RBP5.03□□□□□ -1.6
SMG1-216ENST00000569122 ASB16-AS1Q495Z4 193 aa5.03□□□□□ -1.6
SMG1-216ENST00000569122 FAM229BQ4G0N7 80 aa5.03□□□□□ -1.6
SMG1-216ENST00000569122 CTDSP1Q9GZU7 261 aa5.03□□□□□ -1.6
SMG1-216ENST00000569122 TMEM242Q9NWH2 141 aa5.03□□□□□ -1.6
SMG1-216ENST00000569122 TRBV30A0A0K0K1B3 111 aa5.02□□□□□ -1.61
SMG1-216ENST00000569122 TRBV27A0A0K0K1C4 114 aa5.02□□□□□ -1.61
SMG1-216ENST00000569122 RAB19A4D1S5 217 aa5.02□□□□□ -1.61
SMG1-216ENST00000569122 NDUFC2-KCTD14E9PQ53 114 aa5.02□□□□□ -1.61
SMG1-216ENST00000569122 CFC1BP0CG36 223 aa5.02□□□□□ -1.61
SMG1-216ENST00000569122 CCL20P78556 96 aa5.02□□□□□ -1.61
SMG1-216ENST00000569122 UNQ6190/PRO20217Q6UXQ8 127 aa5.02□□□□□ -1.61
SMG1-216ENST00000569122 FP248Q71RG6 208 aaPredicted RBP5.02□□□□□ -1.61
SMG1-216ENST00000569122 C11orf52Q96A22 123 aa5.02□□□□□ -1.61
SMG1-216ENST00000569122 PACRGQ96M98 296 aaPredicted RBP5.02□□□□□ -1.61
SMG1-216ENST00000569122 MANBALQ9NQG1 85 aa5.02□□□□□ -1.61
SMG1-216ENST00000569122 FXYD6-FXYD2A0A087WZ82 144 aa5.01□□□□□ -1.61
SMG1-216ENST00000569122 IGKV2D-26A0A0A0MRZ7 120 aa5.01□□□□□ -1.61
SMG1-216ENST00000569122 VCYO14598 125 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms