RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 DUX5Q96PT3 197 aa15.69■□□□□ 0.1
SPSB3-208ENST00000566339 VPREB3Q9UKI3 123 aa15.69■□□□□ 0.1
SPSB3-208ENST00000566339 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.69■□□□□ 0.17e-10■■■■■ 29
SPSB3-208ENST00000566339 ZNF469Q96JG9 3925 aaPredicted RBP15.68■□□□□ 0.1
SPSB3-208ENST00000566339 RS1O15537 224 aa15.68■□□□□ 0.1
SPSB3-208ENST00000566339 TEP1Q99973 2627 aaKnown RBP15.68■□□□□ 0.1
SPSB3-208ENST00000566339 NDUFV3P56181 108 aaKnown RBP15.67■□□□□ 0.1
SPSB3-208ENST00000566339 TEX49A0A1B0GTD5 131 aa15.67■□□□□ 0.1
SPSB3-208ENST00000566339 DEFB131AP59861 70 aa15.67■□□□□ 0.1
SPSB3-208ENST00000566339 HERVK_113P63121 156 aa15.67■□□□□ 0.1
SPSB3-208ENST00000566339 TTC32Q5I0X7 151 aa15.67■□□□□ 0.1
SPSB3-208ENST00000566339 BEX4Q9NWD9 120 aaPredicted RBP15.67■□□□□ 0.1
SPSB3-208ENST00000566339 PEMTQ9UBM1 199 aa15.67■□□□□ 0.1
SPSB3-208ENST00000566339 ADARB2-AS1A8MUL3 147 aa15.66■□□□□ 0.1
SPSB3-208ENST00000566339 ACYP1P07311 99 aa15.66■□□□□ 0.1
SPSB3-208ENST00000566339 C10orf99Q6UWK7 81 aa15.66■□□□□ 0.1
SPSB3-208ENST00000566339 A0A096LNT2 108 aa15.65■□□□□ 0.1
SPSB3-208ENST00000566339 IGLV5-39A0A0G2JS06 123 aa15.65■□□□□ 0.1
SPSB3-208ENST00000566339 CSDC2Q9Y534 153 aaKnown RBP15.65■□□□□ 0.1
SPSB3-208ENST00000566339 KNCNA6PVL3 124 aa15.64■□□□□ 0.1
SPSB3-208ENST00000566339 PROK1P58294 105 aa15.64■□□□□ 0.1
SPSB3-208ENST00000566339 C11orf72Q8NBR9 251 aa15.64■□□□□ 0.1
SPSB3-208ENST00000566339 ZNF702PQ9H963 129 aa15.64■□□□□ 0.1
SPSB3-208ENST00000566339 TRAV4A0A0B4J268 109 aa15.64■□□□□ 0.09
SPSB3-208ENST00000566339 NHLRC4P0CG21 123 aaPredicted RBP15.64■□□□□ 0.09
SPSB3-208ENST00000566339 CEMP1Q6PRD7 247 aaPredicted RBP15.64■□□□□ 0.09
SPSB3-208ENST00000566339 C15orf53Q8NAA6 179 aa15.64■□□□□ 0.09
SPSB3-208ENST00000566339 IGHV3-73A0A0B4J1V6 119 aa15.63■□□□□ 0.09
SPSB3-208ENST00000566339 HIVEP1P15822 2718 aa15.63■□□□□ 0.09
SPSB3-208ENST00000566339 RBMY1BA6NDE4 496 aaKnown RBP15.62■□□□□ 0.09
SPSB3-208ENST00000566339 RBMY1EA6NEQ0 496 aaKnown RBP15.62■□□□□ 0.09
SPSB3-208ENST00000566339 RBMY1DP0C7P1 496 aaKnown RBP15.62■□□□□ 0.09
SPSB3-208ENST00000566339 Q6YL49 198 aa15.62■□□□□ 0.09
SPSB3-208ENST00000566339 F8P00451 2351 aa15.62■□□□□ 0.09
SPSB3-208ENST00000566339 FSHBP01225 129 aa15.62■□□□□ 0.09
SPSB3-208ENST00000566339 INSP01308 110 aa15.62■□□□□ 0.09
SPSB3-208ENST00000566339 TMEM101Q96IK0 257 aa15.62■□□□□ 0.09
SPSB3-208ENST00000566339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.61■□□□□ 0.09
SPSB3-208ENST00000566339 IGKV2-29A2NJV5 120 aaPredicted RBP15.61■□□□□ 0.09
SPSB3-208ENST00000566339 ITPR3Q14573 2671 aa15.61■□□□□ 0.09
SPSB3-208ENST00000566339 GAGE12JA6NER3 117 aa15.6■□□□□ 0.09
SPSB3-208ENST00000566339 GAGE7O76087 117 aa15.6■□□□□ 0.09
SPSB3-208ENST00000566339 GAGE12FP0CL80 117 aa15.6■□□□□ 0.09
SPSB3-208ENST00000566339 GAGE12GP0CL81 117 aa15.6■□□□□ 0.09
SPSB3-208ENST00000566339 GAGE12IP0CL82 117 aa15.6■□□□□ 0.09
SPSB3-208ENST00000566339 GAGE4Q13068 117 aa15.6■□□□□ 0.09
SPSB3-208ENST00000566339 DGAT2L7PQ6IED9 249 aa15.6■□□□□ 0.09
SPSB3-208ENST00000566339 Q6ZSN1 163 aa15.6■□□□□ 0.09
SPSB3-208ENST00000566339 CDKN2A-AS1Q9UH64 79 aa15.6■□□□□ 0.09
SPSB3-208ENST00000566339 CRLF1O75462 422 aa15.59■□□□□ 0.09
SPSB3-208ENST00000566339 Q8N2B8 174 aa15.59■□□□□ 0.09
SPSB3-208ENST00000566339 LINC00308Q8TCZ7 52 aa15.59■□□□□ 0.09
SPSB3-208ENST00000566339 TRBV10-1A0A0K0K1A3 114 aa15.59■□□□□ 0.09
SPSB3-208ENST00000566339 TRBV7-7A0A0K0K1E9 115 aa15.59■□□□□ 0.09
SPSB3-208ENST00000566339 COX7A2LO14548 114 aa15.59■□□□□ 0.09
SPSB3-208ENST00000566339 HERV-K104P63124 156 aa15.59■□□□□ 0.09
SPSB3-208ENST00000566339 LINC01587Q99440 93 aa15.59■□□□□ 0.09
SPSB3-208ENST00000566339 IMUPQ9GZP8 106 aa15.59■□□□□ 0.09
SPSB3-208ENST00000566339 PRRC2AP48634 2157 aaKnown RBP15.58■□□□□ 0.08
SPSB3-208ENST00000566339 RNASE13Q5GAN3 156 aaKnown RBP15.57■□□□□ 0.08
SPSB3-208ENST00000566339 MAP6D1Q9H9H5 199 aa15.57■□□□□ 0.08
SPSB3-208ENST00000566339 HTN1P15515 57 aa15.57■□□□□ 0.08
SPSB3-208ENST00000566339 CLEC2BQ92478 149 aa15.57■□□□□ 0.08
SPSB3-208ENST00000566339 CITED2Q99967 270 aaPredicted RBP15.57■□□□□ 0.08
SPSB3-208ENST00000566339 ZFHX3Q15911 3703 aa15.56■□□□□ 0.08
SPSB3-208ENST00000566339 TRACP01848 142 aa15.56■□□□□ 0.08
SPSB3-208ENST00000566339 SHISA2Q6UWI4 295 aa15.56■□□□□ 0.08
SPSB3-208ENST00000566339 IL17DQ8TAD2 202 aa15.55■□□□□ 0.08
SPSB3-208ENST00000566339 C4orf3Q8WVX3 66 aa15.55■□□□□ 0.08
SPSB3-208ENST00000566339 SVEP1Q4LDE5 3571 aa15.55■□□□□ 0.08
SPSB3-208ENST00000566339 IGHV3OR16-12A0A075B7B8 117 aa15.54■□□□□ 0.08
SPSB3-208ENST00000566339 DAZ2Q13117 558 aaKnown RBP15.54■□□□□ 0.08
SPSB3-208ENST00000566339 DAZ4Q86SG3 579 aaKnown RBP15.54■□□□□ 0.08
SPSB3-208ENST00000566339 DAZ3Q9NR90 486 aaKnown RBP15.54■□□□□ 0.08
SPSB3-208ENST00000566339 TRAV25A0A0B4J276 109 aa15.54■□□□□ 0.08
SPSB3-208ENST00000566339 PF4P02776 101 aa15.54■□□□□ 0.08
SPSB3-208ENST00000566339 LINC00242Q5T6M2 205 aa15.54■□□□□ 0.08
SPSB3-208ENST00000566339 A8MZ25 164 aa15.53■□□□□ 0.08
SPSB3-208ENST00000566339 SLURP1P55000 103 aa15.53■□□□□ 0.08
SPSB3-208ENST00000566339 Q9H8V8 135 aa15.53■□□□□ 0.08
SPSB3-208ENST00000566339 RPL36AP83881 106 aaKnown RBP15.52■□□□□ 0.07
SPSB3-208ENST00000566339 DYNLRB2Q8TF09 96 aa15.52■□□□□ 0.07
SPSB3-208ENST00000566339 RPL36ALQ969Q0 106 aaKnown RBP15.52■□□□□ 0.07
SPSB3-208ENST00000566339 NACAE9PAV3 2078 aa15.51■□□□□ 0.07
SPSB3-208ENST00000566339 SMIM1B2RUZ4 78 aa15.51■□□□□ 0.07
SPSB3-208ENST00000566339 FAM222AQ5U5X8 452 aa15.51■□□□□ 0.07
SPSB3-208ENST00000566339 ZNF625Q96I27 306 aaPredicted RBP15.51■□□□□ 0.07
SPSB3-208ENST00000566339 Q9UF83 564 aa15.51■□□□□ 0.07
SPSB3-208ENST00000566339 NPC2P61916 151 aa15.5■□□□□ 0.07
SPSB3-208ENST00000566339 CSPG4Q6UVK1 2322 aa15.5■□□□□ 0.07
SPSB3-208ENST00000566339 DEFB114Q30KQ6 69 aa15.49■□□□□ 0.07
SPSB3-208ENST00000566339 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.49■□□□□ 0.07
SPSB3-208ENST00000566339 ACANP16112 2415 aa15.49■□□□□ 0.07
SPSB3-208ENST00000566339 MTORP42345 2549 aa15.49■□□□□ 0.07
SPSB3-208ENST00000566339 IGHV3-38A0A0C4DH36 116 aa15.49■□□□□ 0.07
SPSB3-208ENST00000566339 COX6A2Q02221 97 aa15.49■□□□□ 0.07
SPSB3-208ENST00000566339 DEFB113Q30KQ7 82 aa15.49■□□□□ 0.07
SPSB3-208ENST00000566339 Q6ZSV7 163 aa15.49■□□□□ 0.07
SPSB3-208ENST00000566339 FLNAP21333 2647 aaKnown RBP15.48■□□□□ 0.07
SPSB3-208ENST00000566339 B5MCH6 92 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms