RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 CCL25O15444 150 aa6.85□□□□□ -1.31
SF3B3-207ENST00000566095 IGLC3P0DOY3 106 aa6.85□□□□□ -1.31
SF3B3-207ENST00000566095 DDTP30046 118 aa6.85□□□□□ -1.31
SF3B3-207ENST00000566095 CCL18P55774 89 aa6.85□□□□□ -1.31
SF3B3-207ENST00000566095 LELP1Q5T871 98 aa6.85□□□□□ -1.31
SF3B3-207ENST00000566095 CEMP1Q6PRD7 247 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-207ENST00000566095 NFE4Q86UQ8 179 aa6.85□□□□□ -1.31
SF3B3-207ENST00000566095 BAALCQ8WXS3 180 aa6.85□□□□□ -1.31
SF3B3-207ENST00000566095 CHCHD5Q9BSY4 110 aa6.85□□□□□ -1.31
SF3B3-207ENST00000566095 CHCHD7Q9BUK0 85 aa6.85□□□□□ -1.31
SF3B3-207ENST00000566095 A0A096LPF7 62 aa6.84□□□□□ -1.31
SF3B3-207ENST00000566095 SPATA45Q537H7 98 aa6.84□□□□□ -1.31
SF3B3-207ENST00000566095 BOD1L2Q8IYS8 172 aa6.84□□□□□ -1.31
SF3B3-207ENST00000566095 WWC2-AS2Q96NR7 200 aa6.84□□□□□ -1.31
SF3B3-207ENST00000566095 CST9LQ9H4G1 147 aa6.84□□□□□ -1.31
SF3B3-207ENST00000566095 UBE2D4Q9Y2X8 147 aa6.84□□□□□ -1.31
SF3B3-207ENST00000566095 CHTOPQ9Y3Y2 248 aaKnown RBP6.84□□□□□ -1.31
SF3B3-207ENST00000566095 A0A1B0GUV1 79 aa6.83□□□□□ -1.32
SF3B3-207ENST00000566095 PRSS29PA6NIE9 313 aa6.83□□□□□ -1.32
SF3B3-207ENST00000566095 CDPF1Q6NVV7 123 aa6.83□□□□□ -1.32
SF3B3-207ENST00000566095 C2orf88Q9BSF0 95 aa6.83□□□□□ -1.32
SF3B3-207ENST00000566095 VCX2Q9H322 139 aa6.83□□□□□ -1.32
SF3B3-207ENST00000566095 MRPS16Q9Y3D3 137 aaKnown RBP6.83□□□□□ -1.32
SF3B3-207ENST00000566095 PAM16Q9Y3D7 125 aa6.83□□□□□ -1.32
SF3B3-207ENST00000566095 MEGF8Q7Z7M0 2845 aa6.82□□□□□ -1.32
SF3B3-207ENST00000566095 IGLV4-3A0A075B6K6 122 aa6.82□□□□□ -1.32
SF3B3-207ENST00000566095 C11orf86A6NJI1 115 aa6.82□□□□□ -1.32
SF3B3-207ENST00000566095 COX8AP10176 69 aa6.82□□□□□ -1.32
SF3B3-207ENST00000566095 OR5A1Q8NGJ0 315 aa6.82□□□□□ -1.32
SF3B3-207ENST00000566095 MRPL35Q9NZE8 188 aaKnown RBP6.82□□□□□ -1.32
SF3B3-207ENST00000566095 TMEM262E9PQX1 116 aa6.81□□□□□ -1.32
SF3B3-207ENST00000566095 HERVK_113P61574 105 aa6.81□□□□□ -1.32
SF3B3-207ENST00000566095 SLC25A34Q6PIV7 304 aa6.81□□□□□ -1.32
SF3B3-207ENST00000566095 LYPD5Q6UWN5 251 aa6.81□□□□□ -1.32
SF3B3-207ENST00000566095 MUC7Q8TAX7 377 aa6.81□□□□□ -1.32
SF3B3-207ENST00000566095 Q9UF83 564 aa6.81□□□□□ -1.32
SF3B3-207ENST00000566095 TENM3Q9P273 2699 aa6.8□□□□□ -1.32
SF3B3-207ENST00000566095 TINCRA0A1B0GVN0 87 aa6.8□□□□□ -1.32
SF3B3-207ENST00000566095 E9PLD3 99 aa6.8□□□□□ -1.32
SF3B3-207ENST00000566095 K7EP13 123 aa6.8□□□□□ -1.32
SF3B3-207ENST00000566095 FGF6P10767 208 aa6.8□□□□□ -1.32
SF3B3-207ENST00000566095 RPL39P62891 51 aaKnown RBP6.8□□□□□ -1.32
SF3B3-207ENST00000566095 NTM-AS1Q6ZSK4 140 aa6.8□□□□□ -1.32
SF3B3-207ENST00000566095 UBE2DNLQ8IWF7 75 aa6.8□□□□□ -1.32
SF3B3-207ENST00000566095 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.79□□□□□ -1.32
SF3B3-207ENST00000566095 IGLV5-45A0A087WSX0 123 aa6.79□□□□□ -1.32
SF3B3-207ENST00000566095 IGKV2-29A2NJV5 120 aaPredicted RBP6.79□□□□□ -1.32
SF3B3-207ENST00000566095 C3orf84H3BNL1 204 aa6.79□□□□□ -1.32
SF3B3-207ENST00000566095 ZC2HC1BQ5TFG8 222 aa6.79□□□□□ -1.32
SF3B3-207ENST00000566095 C10orf126Q8N4M7 172 aa6.79□□□□□ -1.32
SF3B3-207ENST00000566095 HIGD1BQ9P298 99 aa6.79□□□□□ -1.32
SF3B3-207ENST00000566095 STAB2Q8WWQ8 2551 aa6.79□□□□□ -1.32
SF3B3-207ENST00000566095 HUWE1Q7Z6Z7 4374 aaKnown RBP6.79□□□□□ -1.32
SF3B3-207ENST00000566095 DNAH9Q9NYC9 4486 aa6.78□□□□□ -1.32
SF3B3-207ENST00000566095 IGLV4-69A0A075B6H9 119 aa6.78□□□□□ -1.32
SF3B3-207ENST00000566095 HERVK_113P63121 156 aa6.78□□□□□ -1.32
SF3B3-207ENST00000566095 GAGE6Q13070 117 aa6.78□□□□□ -1.32
SF3B3-207ENST00000566095 FAM104AQ969W3 186 aa6.78□□□□□ -1.32
SF3B3-207ENST00000566095 UPK3BQ9BT76 320 aa6.78□□□□□ -1.32
SF3B3-207ENST00000566095 CDC42SE2Q9NRR3 84 aa6.78□□□□□ -1.32
SF3B3-207ENST00000566095 H0Y8G0 127 aa6.77□□□□□ -1.33
SF3B3-207ENST00000566095 CRPP02741 224 aa6.77□□□□□ -1.33
SF3B3-207ENST00000566095 LINC01561Q8N1V8 128 aa6.77□□□□□ -1.33
SF3B3-207ENST00000566095 hDV102S1A0JD36 115 aa6.76□□□□□ -1.33
SF3B3-207ENST00000566095 H3BRM9 83 aa6.76□□□□□ -1.33
SF3B3-207ENST00000566095 NMUP48645 174 aa6.76□□□□□ -1.33
SF3B3-207ENST00000566095 UBE2D1P51668 147 aa6.76□□□□□ -1.33
SF3B3-207ENST00000566095 TAL2Q16559 108 aa6.76□□□□□ -1.33
SF3B3-207ENST00000566095 ESRGQ1W209 222 aa6.76□□□□□ -1.33
SF3B3-207ENST00000566095 LINC01556Q5JQF7 62 aa6.76□□□□□ -1.33
SF3B3-207ENST00000566095 SFTA2Q6UW10 78 aa6.76□□□□□ -1.33
SF3B3-207ENST00000566095 ATOH7Q8N100 152 aa6.76□□□□□ -1.33
SF3B3-207ENST00000566095 DEFB104AQ8WTQ1 72 aa6.76□□□□□ -1.33
SF3B3-207ENST00000566095 PLEKHB2Q96CS7 222 aa6.76□□□□□ -1.33
SF3B3-207ENST00000566095 PRO1933Q9H354 126 aa6.76□□□□□ -1.33
SF3B3-207ENST00000566095 APLNQ9ULZ1 77 aa6.76□□□□□ -1.33
SF3B3-207ENST00000566095 PCP4L1A6NKN8 68 aa6.75□□□□□ -1.33
SF3B3-207ENST00000566095 ANGP03950 147 aaKnown RBP6.75□□□□□ -1.33
SF3B3-207ENST00000566095 HNRNPA3P51991 378 aaKnown RBP6.75□□□□□ -1.33
SF3B3-207ENST00000566095 RBX1P62877 108 aa6.75□□□□□ -1.33
SF3B3-207ENST00000566095 SS18Q15532 418 aa6.75□□□□□ -1.33
SF3B3-207ENST00000566095 ANKRD39Q53RE8 183 aa6.75□□□□□ -1.33
SF3B3-207ENST00000566095 TTC32Q5I0X7 151 aa6.75□□□□□ -1.33
SF3B3-207ENST00000566095 RMI2Q96E14 147 aa6.75□□□□□ -1.33
SF3B3-207ENST00000566095 CHAC1Q9BUX1 264 aa6.75□□□□□ -1.33
SF3B3-207ENST00000566095 TMEM223A0PJW6 202 aa6.74□□□□□ -1.33
SF3B3-207ENST00000566095 LINC00587B1AMM8 73 aa6.74□□□□□ -1.33
SF3B3-207ENST00000566095 M0R143 59 aa6.74□□□□□ -1.33
SF3B3-207ENST00000566095 MAJINQ3KP22 176 aa6.74□□□□□ -1.33
SF3B3-207ENST00000566095 MPV17L2Q567V2 206 aa6.74□□□□□ -1.33
SF3B3-207ENST00000566095 STPG4Q8N801 248 aa6.74□□□□□ -1.33
SF3B3-207ENST00000566095 PRKDCP78527 4128 aaKnown RBP6.74□□□□□ -1.33
SF3B3-207ENST00000566095 TRAV8-4A0A0B4J246 113 aa6.73□□□□□ -1.33
SF3B3-207ENST00000566095 LEPROTO15243 131 aa6.73□□□□□ -1.33
SF3B3-207ENST00000566095 DNAH10OSP0CZ25 163 aa6.73□□□□□ -1.33
SF3B3-207ENST00000566095 ZNF22P17026 224 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-207ENST00000566095 ZFAND6Q6FIF0 208 aa6.73□□□□□ -1.33
SF3B3-207ENST00000566095 Q6ZUT4 128 aa6.73□□□□□ -1.33
SF3B3-207ENST00000566095 C14orf144Q96I85 54 aa6.73□□□□□ -1.33
SF3B3-207ENST00000566095 PPDPFQ9H3Y8 114 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms