RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 K7EN84 100 aa13□□□□□ -0.33
HERC2-204ENST00000563945 FAM210AQ96ND0 272 aa13□□□□□ -0.33
HERC2-204ENST00000563945 FAM231BA6NCW3 169 aa12.99□□□□□ -0.33
HERC2-204ENST00000563945 A8MWL6 223 aa12.99□□□□□ -0.33
HERC2-204ENST00000563945 ODF1Q14990 250 aa12.99□□□□□ -0.33
HERC2-204ENST00000563945 CD164L2Q6UWJ8 174 aa12.99□□□□□ -0.33
HERC2-204ENST00000563945 TRBV6-5A0A0K0K1A5 114 aa12.98□□□□□ -0.33
HERC2-204ENST00000563945 MALP21145 153 aa12.98□□□□□ -0.33
HERC2-204ENST00000563945 GAGE2BQ13066 116 aa12.98□□□□□ -0.33
HERC2-204ENST00000563945 TMEM242Q9NWH2 141 aa12.98□□□□□ -0.33
HERC2-204ENST00000563945 RNF213Q63HN8 5207 aa12.97□□□□□ -0.33
HERC2-204ENST00000563945 LOC107984640A0A0U1RRK4 108 aa12.97□□□□□ -0.33
HERC2-204ENST00000563945 ESDP10768 282 aa12.97□□□□□ -0.33
HERC2-204ENST00000563945 CAMPP49913 170 aa12.97□□□□□ -0.33
HERC2-204ENST00000563945 SRSF9Q13242 221 aaKnown RBP eCLIP12.97□□□□□ -0.33
HERC2-204ENST00000563945 TSHBP01222 138 aa12.96□□□□□ -0.33
HERC2-204ENST00000563945 ZNF664Q8N3J9 261 aa12.96□□□□□ -0.33
HERC2-204ENST00000563945 CDC42SE2Q9NRR3 84 aa12.96□□□□□ -0.33
HERC2-204ENST00000563945 PTTG1IPP53801 180 aa12.95□□□□□ -0.34
HERC2-204ENST00000563945 SLC51BQ86UW2 128 aa12.95□□□□□ -0.34
HERC2-204ENST00000563945 C7orf77A4D0Y5 90 aa12.94□□□□□ -0.34
HERC2-204ENST00000563945 SMAGPQ0VAQ4 97 aa12.94□□□□□ -0.34
HERC2-204ENST00000563945 MRPL52Q86TS9 123 aaKnown RBP12.94□□□□□ -0.34
HERC2-204ENST00000563945 C1orf196B1AJZ1 125 aa12.93□□□□□ -0.34
HERC2-204ENST00000563945 COX7A2LO14548 114 aa12.93□□□□□ -0.34
HERC2-204ENST00000563945 FCER1GP30273 86 aa12.93□□□□□ -0.34
HERC2-204ENST00000563945 FAM231DQ6ZW35 169 aa12.93□□□□□ -0.34
HERC2-204ENST00000563945 CAMK2N2Q96S95 79 aa12.93□□□□□ -0.34
HERC2-204ENST00000563945 IGLV4-69A0A075B6H9 119 aa12.92□□□□□ -0.34
HERC2-204ENST00000563945 CEBPGP53567 150 aa12.92□□□□□ -0.34
HERC2-204ENST00000563945 TMEM250H0YL14 139 aa12.91□□□□□ -0.34
HERC2-204ENST00000563945 MT-ND6P03923 174 aa12.91□□□□□ -0.34
HERC2-204ENST00000563945 A0A1B0GUT8 65 aa12.9□□□□□ -0.34
HERC2-204ENST00000563945 VCYO14598 125 aa12.9□□□□□ -0.34
HERC2-204ENST00000563945 POLR2KP53803 58 aaKnown RBP12.9□□□□□ -0.34
HERC2-204ENST00000563945 CT83Q5H943 113 aa12.9□□□□□ -0.34
HERC2-204ENST00000563945 TMEM191AQ9H0A3 160 aa12.9□□□□□ -0.34
HERC2-204ENST00000563945 TRBV27A0A0K0K1C4 114 aa12.89□□□□□ -0.35
HERC2-204ENST00000563945 GAS8-AS1O95177 125 aa12.89□□□□□ -0.35
HERC2-204ENST00000563945 APOMO95445 188 aa12.88□□□□□ -0.35
HERC2-204ENST00000563945 TRAV13-1A0A0B4J241 112 aa12.87□□□□□ -0.35
HERC2-204ENST00000563945 A0A1W2PNN7 141 aa12.87□□□□□ -0.35
HERC2-204ENST00000563945 PPP1R17O96001 155 aa12.87□□□□□ -0.35
HERC2-204ENST00000563945 RAB4AP20338 218 aa12.87□□□□□ -0.35
HERC2-204ENST00000563945 BLOC1S1P78537 153 aa12.87□□□□□ -0.35
HERC2-204ENST00000563945 RPL18AQ02543 176 aaKnown RBP12.87□□□□□ -0.35
HERC2-204ENST00000563945 C9orf116Q5BN46 136 aaPredicted RBP12.87□□□□□ -0.35
HERC2-204ENST00000563945 NUP35Q8NFH5 326 aa12.87□□□□□ -0.35
HERC2-204ENST00000563945 KIR2DL4Q99706 377 aa12.87□□□□□ -0.35
HERC2-204ENST00000563945 HIGD1CA8MV81 97 aa12.86□□□□□ -0.35
HERC2-204ENST00000563945 TSKUQ8WUA8 353 aa12.86□□□□□ -0.35
HERC2-204ENST00000563945 C2orf48Q96LS8 159 aa12.86□□□□□ -0.35
HERC2-204ENST00000563945 PSORS1C2Q9UIG4 136 aa12.86□□□□□ -0.35
HERC2-204ENST00000563945 C1orf137Q5JT78 98 aa12.85□□□□□ -0.35
HERC2-204ENST00000563945 C5orf38Q86SI9 138 aa12.85□□□□□ -0.35
HERC2-204ENST00000563945 AMN1Q8IY45 258 aa12.85□□□□□ -0.35
HERC2-204ENST00000563945 TMEM18Q96B42 140 aa12.85□□□□□ -0.35
HERC2-204ENST00000563945 CSDC2Q9Y534 153 aaKnown RBP12.85□□□□□ -0.35
HERC2-204ENST00000563945 RIGQ13278 110 aa12.84□□□□□ -0.35
HERC2-204ENST00000563945 TCTE3Q8IZS6 198 aa12.84□□□□□ -0.35
HERC2-204ENST00000563945 RNASE13Q5GAN3 156 aaKnown RBP12.83□□□□□ -0.36
HERC2-204ENST00000563945 SMIM7Q9BQ49 75 aa12.83□□□□□ -0.36
HERC2-204ENST00000563945 SMKR1H3BMG3 65 aa12.82□□□□□ -0.36
HERC2-204ENST00000563945 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.82□□□□□ -0.36
HERC2-204ENST00000563945 SUMO2P61956 95 aaKnown RBP12.82□□□□□ -0.36
HERC2-204ENST00000563945 SPAG11BQ08648 103 aa12.82□□□□□ -0.36
HERC2-204ENST00000563945 UBE2D4Q9Y2X8 147 aa12.82□□□□□ -0.36
HERC2-204ENST00000563945 PPP1R2P9O14990 202 aa12.81□□□□□ -0.36
HERC2-204ENST00000563945 RNF151Q2KHN1 245 aa12.81□□□□□ -0.36
HERC2-204ENST00000563945 PHF5AQ7RTV0 110 aaKnown RBP12.81□□□□□ -0.36
HERC2-204ENST00000563945 OPRPNQ99935 248 aaPredicted RBP12.81□□□□□ -0.36
HERC2-204ENST00000563945 EIF5A2Q9GZV4 153 aaKnown RBP12.81□□□□□ -0.36
HERC2-204ENST00000563945 DIRC1Q969H9 104 aa12.8□□□□□ -0.36
HERC2-204ENST00000563945 OSTCQ9NRP0 149 aa12.8□□□□□ -0.36
HERC2-204ENST00000563945 ALKAL2Q6UX46 152 aa12.79□□□□□ -0.36
HERC2-204ENST00000563945 LINC01551Q86U37 167 aa12.79□□□□□ -0.36
HERC2-204ENST00000563945 IMMP2LQ96T52 175 aa12.79□□□□□ -0.36
HERC2-204ENST00000563945 A0A087WZ39 114 aa12.78□□□□□ -0.36
HERC2-204ENST00000563945 ZNF727A8MUV8 499 aa12.78□□□□□ -0.36
HERC2-204ENST00000563945 Q6ZUT4 128 aa12.78□□□□□ -0.36
HERC2-204ENST00000563945 OR10D4PQ8NGN7 298 aa12.78□□□□□ -0.36
HERC2-204ENST00000563945 TIMM21Q9BVV7 248 aa12.78□□□□□ -0.36
HERC2-204ENST00000563945 F8WDY8 70 aa12.76□□□□□ -0.37
HERC2-204ENST00000563945 NRACQ8N912 160 aa12.76□□□□□ -0.37
HERC2-204ENST00000563945 ORAOV1Q8WV07 137 aa12.76□□□□□ -0.37
HERC2-204ENST00000563945 TCAPO15273 167 aa12.75□□□□□ -0.37
HERC2-204ENST00000563945 IGLV7-43P04211 117 aa12.75□□□□□ -0.37
HERC2-204ENST00000563945 MRPL35Q9NZE8 188 aaKnown RBP12.75□□□□□ -0.37
HERC2-204ENST00000563945 NDUFA1O15239 70 aa12.74□□□□□ -0.37
HERC2-204ENST00000563945 PRR26Q8N8Z3 221 aa12.74□□□□□ -0.37
HERC2-204ENST00000563945 TMEM241Q24JQ0 296 aa12.73□□□□□ -0.37
HERC2-204ENST00000563945 NAT8BQ9UHF3 227 aa12.73□□□□□ -0.37
HERC2-204ENST00000563945 LINC00862A6NCI5 91 aa12.72□□□□□ -0.37
HERC2-204ENST00000563945 CKS2P33552 79 aa12.72□□□□□ -0.37
HERC2-204ENST00000563945 MRPL51Q4U2R6 128 aaKnown RBP12.72□□□□□ -0.37
HERC2-204ENST00000563945 C20orf78Q9BR46 151 aa12.72□□□□□ -0.37
HERC2-204ENST00000563945 V9GYV3 84 aa12.72□□□□□ -0.37
HERC2-204ENST00000563945 FAM104BQ5XKR9 115 aa12.71□□□□□ -0.37
HERC2-204ENST00000563945 FAM19A5Q7Z5A7 132 aaPredicted RBP12.7□□□□□ -0.38
HERC2-204ENST00000563945 IFITM10A6NMD0 228 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms