RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 MT-ND6P03923 174 aa10.37□□□□□ -0.75
RNF40-205ENST00000563909 IQCJQ1A5X6 159 aa10.37□□□□□ -0.75
RNF40-205ENST00000563909 PRELID3AQ96N28 172 aa10.37□□□□□ -0.75
RNF40-205ENST00000563909 LAMTOR2Q9Y2Q5 125 aa10.37□□□□□ -0.75
RNF40-205ENST00000563909 PKIAP61925 76 aa10.36□□□□□ -0.75
RNF40-205ENST00000563909 CHCHD5Q9BSY4 110 aa10.36□□□□□ -0.75
RNF40-205ENST00000563909 TRBV27A0A0K0K1C4 114 aa10.35□□□□□ -0.75
RNF40-205ENST00000563909 NPYP01303 97 aa10.35□□□□□ -0.75
RNF40-205ENST00000563909 AMTP48728 403 aa10.35□□□□□ -0.75
RNF40-205ENST00000563909 RPL32P62910 135 aaKnown RBP10.35□□□□□ -0.75
RNF40-205ENST00000563909 LAGE3Q14657 143 aa10.35□□□□□ -0.75
RNF40-205ENST00000563909 NIT1Q86X76 327 aa10.35□□□□□ -0.75
RNF40-205ENST00000563909 CHCHD7Q9BUK0 85 aa10.35□□□□□ -0.75
RNF40-205ENST00000563909 TMEM262E9PQX1 116 aa10.34□□□□□ -0.75
RNF40-205ENST00000563909 Q6ZRU5 148 aa10.34□□□□□ -0.75
RNF40-205ENST00000563909 CBLN2Q8IUK8 224 aa10.34□□□□□ -0.75
RNF40-205ENST00000563909 KIR2DL4Q99706 377 aa10.34□□□□□ -0.75
RNF40-205ENST00000563909 TMEM243Q9BU79 118 aa10.34□□□□□ -0.75
RNF40-205ENST00000563909 A0A087WX48 190 aa10.33□□□□□ -0.76
RNF40-205ENST00000563909 TCAPO15273 167 aa10.33□□□□□ -0.76
RNF40-205ENST00000563909 BAALCQ8WXS3 180 aa10.33□□□□□ -0.76
RNF40-205ENST00000563909 YPEL4Q96NS1 127 aa10.33□□□□□ -0.76
RNF40-205ENST00000563909 MRPL18Q9H0U6 180 aaKnown RBP10.33□□□□□ -0.76
RNF40-205ENST00000563909 TRAPPC1Q9Y5R8 145 aa10.33□□□□□ -0.76
RNF40-205ENST00000563909 PRSS47A8MTI9 375 aa10.32□□□□□ -0.76
RNF40-205ENST00000563909 UBE2L6O14933 153 aa10.32□□□□□ -0.76
RNF40-205ENST00000563909 TSHBP01222 138 aa10.32□□□□□ -0.76
RNF40-205ENST00000563909 FCER1GP30273 86 aa10.32□□□□□ -0.76
RNF40-205ENST00000563909 FABP9Q0Z7S8 132 aa10.32□□□□□ -0.76
RNF40-205ENST00000563909 KIAA1644Q3SXP7 199 aa10.32□□□□□ -0.76
RNF40-205ENST00000563909 SMIM2Q9BVW6 85 aa10.32□□□□□ -0.76
RNF40-205ENST00000563909 MAP1LC3AQ9H492 121 aa10.32□□□□□ -0.76
RNF40-205ENST00000563909 GAGE6Q13070 117 aa10.31□□□□□ -0.76
RNF40-205ENST00000563909 TRAV8-3A0A0A6YYJ7 113 aa10.3□□□□□ -0.76
RNF40-205ENST00000563909 H7C423 109 aa10.3□□□□□ -0.76
RNF40-205ENST00000563909 ODF1Q14990 250 aa10.3□□□□□ -0.76
RNF40-205ENST00000563909 FAT4Q6V0I7 4981 aa10.29□□□□□ -0.76
RNF40-205ENST00000563909 ESDP10768 282 aa10.29□□□□□ -0.76
RNF40-205ENST00000563909 S100A1P23297 94 aa10.29□□□□□ -0.76
RNF40-205ENST00000563909 Q8N3U1 123 aa10.29□□□□□ -0.76
RNF40-205ENST00000563909 Q8N976 141 aa10.29□□□□□ -0.76
RNF40-205ENST00000563909 LOC389332A0A1B0GUA5 103 aa10.28□□□□□ -0.76
RNF40-205ENST00000563909 A0A1B0GUV1 79 aa10.28□□□□□ -0.76
RNF40-205ENST00000563909 RAB5AP20339 215 aa10.28□□□□□ -0.76
RNF40-205ENST00000563909 MPV17L2Q567V2 206 aa10.28□□□□□ -0.76
RNF40-205ENST00000563909 Q8N8P6 123 aa10.28□□□□□ -0.76
RNF40-205ENST00000563909 ALKBH7Q9BT30 221 aaPredicted RBP10.28□□□□□ -0.76
RNF40-205ENST00000563909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.27□□□□□ -0.77
RNF40-205ENST00000563909 IGKV2-29A2NJV5 120 aaPredicted RBP10.27□□□□□ -0.77
RNF40-205ENST00000563909 RBX1P62877 108 aa10.27□□□□□ -0.77
RNF40-205ENST00000563909 AMMECR1LQ6DCA0 310 aa10.27□□□□□ -0.77
RNF40-205ENST00000563909 TMEM18Q96B42 140 aa10.27□□□□□ -0.77
RNF40-205ENST00000563909 NXT2Q9NPJ8 142 aaKnown RBP10.27□□□□□ -0.77
RNF40-205ENST00000563909 KLK12Q9UKR0 248 aa10.27□□□□□ -0.77
RNF40-205ENST00000563909 COX11Q9Y6N1 276 aa10.27□□□□□ -0.77
RNF40-205ENST00000563909 ANGP03950 147 aaKnown RBP10.26□□□□□ -0.77
RNF40-205ENST00000563909 SMAGPQ0VAQ4 97 aa10.26□□□□□ -0.77
RNF40-205ENST00000563909 MUC2Q02817 5179 aa10.26□□□□□ -0.77
RNF40-205ENST00000563909 K7EMI3 77 aa10.25□□□□□ -0.77
RNF40-205ENST00000563909 ATP6V1G1O75348 118 aa10.25□□□□□ -0.77
RNF40-205ENST00000563909 FGF6P10767 208 aa10.25□□□□□ -0.77
RNF40-205ENST00000563909 ZNF25P17030 456 aaPredicted RBP10.25□□□□□ -0.77
RNF40-205ENST00000563909 COLCA2A8K830 154 aa10.24□□□□□ -0.77
RNF40-205ENST00000563909 SCO1O75880 301 aa10.24□□□□□ -0.77
RNF40-205ENST00000563909 IFI27P40305 119 aaPredicted RBP10.24□□□□□ -0.77
RNF40-205ENST00000563909 Q0VG73 95 aa10.24□□□□□ -0.77
RNF40-205ENST00000563909 RNASEKQ6P5S7 137 aaKnown RBP10.24□□□□□ -0.77
RNF40-205ENST00000563909 C20orf203Q8NBC4 194 aa10.24□□□□□ -0.77
RNF40-205ENST00000563909 PRSS3P2Q8NHM4 247 aa10.24□□□□□ -0.77
RNF40-205ENST00000563909 TMEM101Q96IK0 257 aa10.24□□□□□ -0.77
RNF40-205ENST00000563909 CRPP02741 224 aa10.23□□□□□ -0.77
RNF40-205ENST00000563909 ORMDL2Q53FV1 153 aa10.23□□□□□ -0.77
RNF40-205ENST00000563909 MRPL52Q86TS9 123 aaKnown RBP10.23□□□□□ -0.77
RNF40-205ENST00000563909 UBE2WQ96B02 151 aa10.23□□□□□ -0.77
RNF40-205ENST00000563909 RMI2Q96E14 147 aa10.23□□□□□ -0.77
RNF40-205ENST00000563909 IGLV4-60A0A075B6I1 120 aa10.22□□□□□ -0.77
RNF40-205ENST00000563909 LPAP08519 4548 aa10.21□□□□□ -0.77
RNF40-205ENST00000563909 G0S2P27469 103 aa10.21□□□□□ -0.77
RNF40-205ENST00000563909 DGAT2L7PQ6IED9 249 aa10.21□□□□□ -0.77
RNF40-205ENST00000563909 ENHOQ6UWT2 76 aa10.21□□□□□ -0.77
RNF40-205ENST00000563909 LINC00269Q8N2A0 174 aa10.21□□□□□ -0.77
RNF40-205ENST00000563909 OR5A1Q8NGJ0 315 aa10.21□□□□□ -0.77
RNF40-205ENST00000563909 TIMM21Q9BVV7 248 aa10.21□□□□□ -0.77
RNF40-205ENST00000563909 PRR34Q9NV39 138 aa10.21□□□□□ -0.77
RNF40-205ENST00000563909 CSDC2Q9Y534 153 aaKnown RBP10.21□□□□□ -0.77
RNF40-205ENST00000563909 IGKV2D-24A0A075B6R9 120 aa10.2□□□□□ -0.78
RNF40-205ENST00000563909 REG3AQ06141 175 aa10.2□□□□□ -0.78
RNF40-205ENST00000563909 MIAQ16674 131 aa10.2□□□□□ -0.78
RNF40-205ENST00000563909 FA2HQ7L5A8 372 aa10.2□□□□□ -0.78
RNF40-205ENST00000563909 C18orf32Q8TCD1 76 aa10.2□□□□□ -0.78
RNF40-205ENST00000563909 UBE2D4Q9Y2X8 147 aa10.2□□□□□ -0.78
RNF40-205ENST00000563909 TRGC2P03986 189 aa10.19□□□□□ -0.78
RNF40-205ENST00000563909 LINC01546A6NGU7 62 aa10.18□□□□□ -0.78
RNF40-205ENST00000563909 RAB5BP61020 215 aa10.18□□□□□ -0.78
RNF40-205ENST00000563909 RPL39P62891 51 aaKnown RBP10.18□□□□□ -0.78
RNF40-205ENST00000563909 CLPSL2Q6UWE3 100 aa10.18□□□□□ -0.78
RNF40-205ENST00000563909 ZNF664Q8N3J9 261 aa10.18□□□□□ -0.78
RNF40-205ENST00000563909 LINC01600Q96MT4 127 aa10.18□□□□□ -0.78
RNF40-205ENST00000563909 C1orf43Q9BWL3 253 aa10.18□□□□□ -0.78
RNF40-205ENST00000563909 CDC42SE2Q9NRR3 84 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms