RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 CHCHD5Q9BSY4 110 aa7□□□□□ -1.29
SMG1-208ENST00000563448 IGLV4-3A0A075B6K6 122 aa6.99□□□□□ -1.29
SMG1-208ENST00000563448 H0Y8G0 127 aa6.99□□□□□ -1.29
SMG1-208ENST00000563448 UBE2L6O14933 153 aa6.99□□□□□ -1.29
SMG1-208ENST00000563448 FGF6P10767 208 aa6.99□□□□□ -1.29
SMG1-208ENST00000563448 TIRAPP58753 221 aa6.99□□□□□ -1.29
SMG1-208ENST00000563448 ESRGQ1W209 222 aa6.99□□□□□ -1.29
SMG1-208ENST00000563448 LELP1Q5T871 98 aa6.99□□□□□ -1.29
SMG1-208ENST00000563448 Q6ZN92 141 aa6.99□□□□□ -1.29
SMG1-208ENST00000563448 TIMM21Q9BVV7 248 aa6.99□□□□□ -1.29
SMG1-208ENST00000563448 SPANXA1Q9NS26 97 aa6.99□□□□□ -1.29
SMG1-208ENST00000563448 ZC2HC1BQ5TFG8 222 aa6.98□□□□□ -1.29
SMG1-208ENST00000563448 DYNC2H1Q8NCM8 4307 aaKnown RBP6.98□□□□□ -1.29
SMG1-208ENST00000563448 PRSS1P07477 247 aa6.98□□□□□ -1.29
SMG1-208ENST00000563448 C21orf62-AS1Q17RA5 79 aa6.98□□□□□ -1.29
SMG1-208ENST00000563448 PET117Q6UWS5 81 aa6.98□□□□□ -1.29
SMG1-208ENST00000563448 CSMD3Q7Z407 3707 aa6.97□□□□□ -1.29
SMG1-208ENST00000563448 AMMECR1LQ6DCA0 310 aa6.97□□□□□ -1.29
SMG1-208ENST00000563448 Q6ZUT4 128 aa6.97□□□□□ -1.29
SMG1-208ENST00000563448 VAMP8Q9BV40 100 aa6.97□□□□□ -1.29
SMG1-208ENST00000563448 APLNQ9ULZ1 77 aa6.97□□□□□ -1.29
SMG1-208ENST00000563448 CSDC2Q9Y534 153 aaKnown RBP6.97□□□□□ -1.29
SMG1-208ENST00000563448 NPSP0C0P6 89 aa6.96□□□□□ -1.29
SMG1-208ENST00000563448 MRPS36P82909 103 aaKnown RBP6.96□□□□□ -1.29
SMG1-208ENST00000563448 RNASE13Q5GAN3 156 aaKnown RBP6.96□□□□□ -1.29
SMG1-208ENST00000563448 LINC01545Q5VT33 79 aa6.96□□□□□ -1.29
SMG1-208ENST00000563448 DGAT2L7PQ6IED9 249 aa6.96□□□□□ -1.29
SMG1-208ENST00000563448 AMELXQ99217 191 aa6.96□□□□□ -1.29
SMG1-208ENST00000563448 IGLV4-60A0A075B6I1 120 aa6.96□□□□□ -1.3
SMG1-208ENST00000563448 TRAV12-1A0A0B4J245 112 aa6.96□□□□□ -1.3
SMG1-208ENST00000563448 NUPR2A6NF83 97 aa6.96□□□□□ -1.3
SMG1-208ENST00000563448 PRSS29PA6NIE9 313 aa6.96□□□□□ -1.3
SMG1-208ENST00000563448 TMEM262E9PQX1 116 aa6.96□□□□□ -1.3
SMG1-208ENST00000563448 SMAGPQ0VAQ4 97 aa6.96□□□□□ -1.3
SMG1-208ENST00000563448 ODF1Q14990 250 aa6.96□□□□□ -1.3
SMG1-208ENST00000563448 PMVKQ15126 192 aa6.96□□□□□ -1.3
SMG1-208ENST00000563448 MPV17L2Q567V2 206 aa6.96□□□□□ -1.3
SMG1-208ENST00000563448 LGALS9CQ6DKI2 356 aa6.96□□□□□ -1.3
SMG1-208ENST00000563448 PMCHL2Q9BQD1 86 aa6.96□□□□□ -1.3
SMG1-208ENST00000563448 CDC42SE2Q9NRR3 84 aa6.96□□□□□ -1.3
SMG1-208ENST00000563448 A0A087WX48 190 aa6.95□□□□□ -1.3
SMG1-208ENST00000563448 Q8N3U1 123 aa6.95□□□□□ -1.3
SMG1-208ENST00000563448 OR5A1Q8NGJ0 315 aa6.95□□□□□ -1.3
SMG1-208ENST00000563448 TMEM101Q96IK0 257 aa6.95□□□□□ -1.3
SMG1-208ENST00000563448 VCX2Q9H322 139 aa6.95□□□□□ -1.3
SMG1-208ENST00000563448 CST9LQ9H4G1 147 aa6.95□□□□□ -1.3
SMG1-208ENST00000563448 LINC00588Q9Y4M8 146 aa6.95□□□□□ -1.3
SMG1-208ENST00000563448 TRAV8-6A0A0B4J262 113 aa6.94□□□□□ -1.3
SMG1-208ENST00000563448 A0A1B0GUV1 79 aa6.94□□□□□ -1.3
SMG1-208ENST00000563448 RBX1P62877 108 aa6.94□□□□□ -1.3
SMG1-208ENST00000563448 WFDC10BQ8IUB3 73 aa6.94□□□□□ -1.3
SMG1-208ENST00000563448 ORAOV1Q8WV07 137 aa6.94□□□□□ -1.3
SMG1-208ENST00000563448 STARD9Q9P2P6 4700 aa6.94□□□□□ -1.3
SMG1-208ENST00000563448 PAPPA-AS1Q5QFB9 102 aa6.94□□□□□ -1.3
SMG1-208ENST00000563448 MRPL35Q9NZE8 188 aaKnown RBP6.94□□□□□ -1.3
SMG1-208ENST00000563448 UQCR10Q9UDW1 63 aa6.94□□□□□ -1.3
SMG1-208ENST00000563448 KLK5Q9Y337 293 aaPredicted RBP6.94□□□□□ -1.3
SMG1-208ENST00000563448 CHTOPQ9Y3Y2 248 aaKnown RBP6.94□□□□□ -1.3
SMG1-208ENST00000563448 C20orf202A1L168 122 aa6.93□□□□□ -1.3
SMG1-208ENST00000563448 ATOH7Q8N100 152 aa6.93□□□□□ -1.3
SMG1-208ENST00000563448 IGLV4-69A0A075B6H9 119 aa6.93□□□□□ -1.3
SMG1-208ENST00000563448 F8VRH5 84 aa6.93□□□□□ -1.3
SMG1-208ENST00000563448 ZFAND6Q6FIF0 208 aa6.93□□□□□ -1.3
SMG1-208ENST00000563448 MRPS16Q9Y3D3 137 aaKnown RBP6.93□□□□□ -1.3
SMG1-208ENST00000563448 CCL18P55774 89 aa6.92□□□□□ -1.3
SMG1-208ENST00000563448 IGHV3-30P01768 117 aa6.91□□□□□ -1.3
SMG1-208ENST00000563448 IGHV3-33P01772 117 aa6.91□□□□□ -1.3
SMG1-208ENST00000563448 IGHV3-30-3P0DP02 117 aa6.91□□□□□ -1.3
SMG1-208ENST00000563448 IGHV3-30-5P0DP03 117 aa6.91□□□□□ -1.3
SMG1-208ENST00000563448 UBE2D1P51668 147 aa6.91□□□□□ -1.3
SMG1-208ENST00000563448 MUC7Q8TAX7 377 aa6.91□□□□□ -1.3
SMG1-208ENST00000563448 WWC2-AS2Q96NR7 200 aa6.91□□□□□ -1.3
SMG1-208ENST00000563448 PLECQ15149 4684 aaKnown RBP6.91□□□□□ -1.3
SMG1-208ENST00000563448 A0A0J9YXV3 536 aa6.91□□□□□ -1.3
SMG1-208ENST00000563448 IGKCP01834 107 aa6.91□□□□□ -1.3
SMG1-208ENST00000563448 TCTAP57738 103 aa6.91□□□□□ -1.3
SMG1-208ENST00000563448 C11orf86A6NJI1 115 aa6.9□□□□□ -1.3
SMG1-208ENST00000563448 K7EP13 123 aa6.9□□□□□ -1.3
SMG1-208ENST00000563448 DPM2O94777 84 aa6.9□□□□□ -1.3
SMG1-208ENST00000563448 ANGP03950 147 aaKnown RBP6.9□□□□□ -1.3
SMG1-208ENST00000563448 IGLC3P0DOY3 106 aa6.9□□□□□ -1.3
SMG1-208ENST00000563448 FAM19A3Q7Z5A8 133 aa6.9□□□□□ -1.3
SMG1-208ENST00000563448 LINC00269Q8N2A0 174 aa6.9□□□□□ -1.3
SMG1-208ENST00000563448 UPK3BQ9BT76 320 aa6.9□□□□□ -1.3
SMG1-208ENST00000563448 PAM16Q9Y3D7 125 aa6.9□□□□□ -1.3
SMG1-208ENST00000563448 TGP01266 2768 aa6.9□□□□□ -1.31
SMG1-208ENST00000563448 IGKV3OR2-268A0A0C4DH90 116 aa6.89□□□□□ -1.31
SMG1-208ENST00000563448 MAJINQ3KP22 176 aa6.89□□□□□ -1.31
SMG1-208ENST00000563448 CLPSL2Q6UWE3 100 aa6.89□□□□□ -1.31
SMG1-208ENST00000563448 NFE4Q86UQ8 179 aa6.89□□□□□ -1.31
SMG1-208ENST00000563448 TRAV13-1A0A0B4J241 112 aa6.89□□□□□ -1.31
SMG1-208ENST00000563448 SIVA1O15304 175 aa6.89□□□□□ -1.31
SMG1-208ENST00000563448 DNAH10OSP0CZ25 163 aa6.89□□□□□ -1.31
SMG1-208ENST00000563448 PLNP26678 52 aa6.89□□□□□ -1.31
SMG1-208ENST00000563448 LINC01556Q5JQF7 62 aa6.89□□□□□ -1.31
SMG1-208ENST00000563448 KLK12Q9UKR0 248 aa6.89□□□□□ -1.31
SMG1-208ENST00000563448 LINC00959A0A1B0GUT2 108 aa6.88□□□□□ -1.31
SMG1-208ENST00000563448 TINCRA0A1B0GVN0 87 aa6.88□□□□□ -1.31
SMG1-208ENST00000563448 hDV102S1A0JD36 115 aa6.88□□□□□ -1.31
SMG1-208ENST00000563448 HNRNPA3P51991 378 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms