RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	SRP19	P09132	144 aa	Known RBP	4.74	□□□□□ -1.65
ZEB1-223	ENST00000561304	RPS10	P46783	165 aa	Known RBP	4.74	□□□□□ -1.65
ZEB1-223	ENST00000561304	LINC01551	Q86U37	167 aa		4.74	□□□□□ -1.65
ZEB1-223	ENST00000561304	C15orf56	Q8N910	161 aa		4.74	□□□□□ -1.65
ZEB1-223	ENST00000561304	FAM210A	Q96ND0	272 aa		4.74	□□□□□ -1.65
ZEB1-223	ENST00000561304	SMIM7	Q9BQ49	75 aa		4.74	□□□□□ -1.65
ZEB1-223	ENST00000561304	TRAV8-4	A0A0B4J246	113 aa		4.73	□□□□□ -1.65
ZEB1-223	ENST00000561304	hDV102S1	A0JD36	115 aa		4.73	□□□□□ -1.65
ZEB1-223	ENST00000561304	FAM231B	A6NCW3	169 aa		4.73	□□□□□ -1.65
ZEB1-223	ENST00000561304	SDHAF1	A6NFY7	115 aa		4.73	□□□□□ -1.65
ZEB1-223	ENST00000561304	HIGD1C	A8MV81	97 aa		4.73	□□□□□ -1.65
ZEB1-223	ENST00000561304		A8MWL6	223 aa		4.73	□□□□□ -1.65
ZEB1-223	ENST00000561304		C9JQL5	133 aa		4.73	□□□□□ -1.65
ZEB1-223	ENST00000561304	APCS	P02743	223 aa		4.73	□□□□□ -1.65
ZEB1-223	ENST00000561304	CHTF8	P0CG12	524 aa		4.73	□□□□□ -1.65
ZEB1-223	ENST00000561304	CNBP	P62633	177 aa	Known RBP	4.73	□□□□□ -1.65
ZEB1-223	ENST00000561304	SDIM1	Q6ZPB5	146 aa		4.73	□□□□□ -1.65
ZEB1-223	ENST00000561304	RNF185	Q96GF1	192 aa		4.73	□□□□□ -1.65
ZEB1-223	ENST00000561304	EIF5A2	Q9GZV4	153 aa	Known RBP	4.73	□□□□□ -1.65
ZEB1-223	ENST00000561304	HMCN2	Q8NDA2	5059 aa		4.73	□□□□□ -1.65
ZEB1-223	ENST00000561304	ZNF727	A8MUV8	499 aa		4.72	□□□□□ -1.65
ZEB1-223	ENST00000561304	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.72	□□□□□ -1.65
ZEB1-223	ENST00000561304	TSHB	P01222	138 aa		4.72	□□□□□ -1.65
ZEB1-223	ENST00000561304	TSKU	Q8WUA8	353 aa		4.72	□□□□□ -1.65
ZEB1-223	ENST00000561304	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.72	□□□□□ -1.65
ZEB1-223	ENST00000561304	TMEM242	Q9NWH2	141 aa		4.72	□□□□□ -1.65
ZEB1-223	ENST00000561304		V9GYV3	84 aa		4.72	□□□□□ -1.65
ZEB1-223	ENST00000561304	TRBV6-5	A0A0K0K1A5	114 aa		4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	SMKR1	H3BMG3	65 aa		4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	NDUFS6	O75380	124 aa	Known RBP	4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	NCR2	O95944	276 aa		4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	FGF6	P10767	208 aa		4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	ESD	P10768	282 aa		4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	RAB4A	P20338	218 aa		4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	RPL37A	P61513	92 aa	Known RBP	4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	CIRBP	Q14011	172 aa	Known RBP	4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	HIGD2B	Q4VC39	106 aa		4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	RNASEK	Q6P5S7	137 aa	Known RBP	4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	SMIM15	Q7Z3B0	74 aa		4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	AMN1	Q8IY45	258 aa		4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	NUP35	Q8NFH5	326 aa		4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	ISOC2	Q96AB3	205 aa		4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	TMEM191A	Q9H0A3	160 aa		4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304	OSTC	Q9NRP0	149 aa		4.71	□□□□□ -1.66
ZEB1-223	ENST00000561304		A0A1B0GUT8	65 aa		4.7	□□□□□ -1.66
ZEB1-223	ENST00000561304		I3L3M4	83 aa		4.7	□□□□□ -1.66
ZEB1-223	ENST00000561304	POLR2K	P53803	58 aa	Known RBP	4.7	□□□□□ -1.66
ZEB1-223	ENST00000561304	RPL23	P62829	140 aa	Known RBP	4.7	□□□□□ -1.66
ZEB1-223	ENST00000561304	FOXI1	Q12951	378 aa		4.7	□□□□□ -1.66
ZEB1-223	ENST00000561304	AMMECR1L	Q6DCA0	310 aa		4.7	□□□□□ -1.66
ZEB1-223	ENST00000561304	ST20	Q9HBF5	79 aa		4.7	□□□□□ -1.66
ZEB1-223	ENST00000561304	IGHV3-64	A0A075B6Q5	118 aa		4.69	□□□□□ -1.66
ZEB1-223	ENST00000561304		H7C423	109 aa		4.69	□□□□□ -1.66
ZEB1-223	ENST00000561304	PMCH	P20382	165 aa		4.69	□□□□□ -1.66
ZEB1-223	ENST00000561304	PCP4	P48539	62 aa		4.69	□□□□□ -1.66
ZEB1-223	ENST00000561304	KRTAP15-1	Q3LI76	137 aa		4.69	□□□□□ -1.66
ZEB1-223	ENST00000561304	TEX261	Q6UWH6	196 aa		4.69	□□□□□ -1.66
ZEB1-223	ENST00000561304	PET117	Q6UWS5	81 aa		4.69	□□□□□ -1.66
ZEB1-223	ENST00000561304	NRAC	Q8N912	160 aa		4.69	□□□□□ -1.66
ZEB1-223	ENST00000561304	SPACA4	Q8TDM5	124 aa		4.69	□□□□□ -1.66
ZEB1-223	ENST00000561304	BORCS7	Q96B45	105 aa		4.69	□□□□□ -1.66
ZEB1-223	ENST00000561304		A0A087WYN8	130 aa		4.68	□□□□□ -1.66
ZEB1-223	ENST00000561304	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.68	□□□□□ -1.66
ZEB1-223	ENST00000561304	TRBV27	A0A0K0K1C4	114 aa		4.68	□□□□□ -1.66
ZEB1-223	ENST00000561304	LINC00959	A0A1B0GUT2	108 aa		4.68	□□□□□ -1.66
ZEB1-223	ENST00000561304	ZNF25	P17030	456 aa	Predicted RBP	4.68	□□□□□ -1.66
ZEB1-223	ENST00000561304	XCL1	P47992	114 aa		4.68	□□□□□ -1.66
ZEB1-223	ENST00000561304	COX6A2	Q02221	97 aa		4.68	□□□□□ -1.66
ZEB1-223	ENST00000561304	ADIRF	Q15847	76 aa		4.68	□□□□□ -1.66
ZEB1-223	ENST00000561304	OR5A1	Q8NGJ0	315 aa		4.68	□□□□□ -1.66
ZEB1-223	ENST00000561304	PRSS3P2	Q8NHM4	247 aa		4.68	□□□□□ -1.66
ZEB1-223	ENST00000561304	LINC00526	Q96FQ7	95 aa		4.68	□□□□□ -1.66
ZEB1-223	ENST00000561304	MRAP2	Q96G30	205 aa		4.68	□□□□□ -1.66
ZEB1-223	ENST00000561304	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.67	□□□□□ -1.66
ZEB1-223	ENST00000561304	CCL25	O15444	150 aa		4.67	□□□□□ -1.66
ZEB1-223	ENST00000561304	TMEM241	Q24JQ0	296 aa		4.67	□□□□□ -1.66
ZEB1-223	ENST00000561304	MRPL51	Q4U2R6	128 aa	Known RBP	4.67	□□□□□ -1.66
ZEB1-223	ENST00000561304	RNASE13	Q5GAN3	156 aa	Known RBP	4.67	□□□□□ -1.66
ZEB1-223	ENST00000561304	MRPL52	Q86TS9	123 aa	Known RBP	4.67	□□□□□ -1.66
ZEB1-223	ENST00000561304	CDC42SE2	Q9NRR3	84 aa		4.67	□□□□□ -1.66
ZEB1-223	ENST00000561304	NAT8	Q9UHE5	227 aa		4.67	□□□□□ -1.66
ZEB1-223	ENST00000561304		A0A096LNI7	61 aa		4.66	□□□□□ -1.66
ZEB1-223	ENST00000561304	IGKV2-24	A0A0C4DH68	120 aa		4.66	□□□□□ -1.66
ZEB1-223	ENST00000561304	SMIM27	A0A1W2PRY6	76 aa		4.66	□□□□□ -1.66
ZEB1-223	ENST00000561304	C7orf77	A4D0Y5	90 aa		4.66	□□□□□ -1.66
ZEB1-223	ENST00000561304	RIG	Q13278	110 aa		4.66	□□□□□ -1.66
ZEB1-223	ENST00000561304	FAM74A3	Q4VXF1	159 aa		4.66	□□□□□ -1.66
ZEB1-223	ENST00000561304	PLAC8	Q9NZF1	115 aa		4.66	□□□□□ -1.66
ZEB1-223	ENST00000561304	NAT8B	Q9UHF3	227 aa		4.66	□□□□□ -1.66
ZEB1-223	ENST00000561304	UBE2D4	Q9Y2X8	147 aa		4.66	□□□□□ -1.66
ZEB1-223	ENST00000561304	PHOX2A	O14813	284 aa		4.65	□□□□□ -1.66
ZEB1-223	ENST00000561304	OXT	P01178	125 aa		4.65	□□□□□ -1.66
ZEB1-223	ENST00000561304	MT1HL1	P0DM35	61 aa		4.65	□□□□□ -1.66
ZEB1-223	ENST00000561304	CAMP	P49913	170 aa		4.65	□□□□□ -1.66
ZEB1-223	ENST00000561304	SUMO2	P61956	95 aa	Known RBP	4.65	□□□□□ -1.66
ZEB1-223	ENST00000561304	FAM104B	Q5XKR9	115 aa		4.65	□□□□□ -1.66
ZEB1-223	ENST00000561304		Q6ZUT4	128 aa		4.65	□□□□□ -1.66
ZEB1-223	ENST00000561304	ZNF664	Q8N3J9	261 aa		4.65	□□□□□ -1.66
ZEB1-223	ENST00000561304	FAM104A	Q969W3	186 aa		4.65	□□□□□ -1.66
ZEB1-223	ENST00000561304	TMEM101	Q96IK0	257 aa		4.65	□□□□□ -1.66

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