RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 A0A096LNI7 61 aa9.81□□□□□ -0.84
TPM1-211ENST00000558314 GVQW2A0A096LPI5 108 aaPredicted RBP9.81□□□□□ -0.84
TPM1-211ENST00000558314 ZNF727A8MUV8 499 aa9.81□□□□□ -0.84
TPM1-211ENST00000558314 SS18Q15532 418 aa9.81□□□□□ -0.84
TPM1-211ENST00000558314 AMN1Q8IY45 258 aa9.81□□□□□ -0.84
TPM1-211ENST00000558314 TSKUQ8WUA8 353 aa9.81□□□□□ -0.84
TPM1-211ENST00000558314 TRBV6-5A0A0K0K1A5 114 aa9.8□□□□□ -0.84
TPM1-211ENST00000558314 FCER1GP30273 86 aa9.8□□□□□ -0.84
TPM1-211ENST00000558314 CT83Q5H943 113 aa9.8□□□□□ -0.84
TPM1-211ENST00000558314 LINC01551Q86U37 167 aa9.8□□□□□ -0.84
TPM1-211ENST00000558314 IGHV1-58A0A0C4DH39 117 aa9.79□□□□□ -0.84
TPM1-211ENST00000558314 MT1HL1P0DM35 61 aa9.79□□□□□ -0.84
TPM1-211ENST00000558314 RAB4AP20338 218 aa9.79□□□□□ -0.84
TPM1-211ENST00000558314 TMEM191AQ9H0A3 160 aa9.79□□□□□ -0.84
TPM1-211ENST00000558314 C7orf77A4D0Y5 90 aa9.78□□□□□ -0.84
TPM1-211ENST00000558314 ZNF561-AS1K7EIQ3 104 aa9.78□□□□□ -0.84
TPM1-211ENST00000558314 ESDP10768 282 aa9.78□□□□□ -0.84
TPM1-211ENST00000558314 RAB14P61106 215 aa9.78□□□□□ -0.84
TPM1-211ENST00000558314 RNASE13Q5GAN3 156 aaKnown RBP9.78□□□□□ -0.84
TPM1-211ENST00000558314 CARD19Q96LW7 228 aa9.78□□□□□ -0.84
TPM1-211ENST00000558314 MALP21145 153 aa9.77□□□□□ -0.85
TPM1-211ENST00000558314 RIGQ13278 110 aa9.77□□□□□ -0.85
TPM1-211ENST00000558314 ZNF664Q8N3J9 261 aa9.77□□□□□ -0.85
TPM1-211ENST00000558314 OSTCQ9NRP0 149 aa9.77□□□□□ -0.85
TPM1-211ENST00000558314 CDC42SE2Q9NRR3 84 aa9.77□□□□□ -0.85
TPM1-211ENST00000558314 SRP19P09132 144 aaKnown RBP9.76□□□□□ -0.85
TPM1-211ENST00000558314 POLR2KP53803 58 aaKnown RBP9.76□□□□□ -0.85
TPM1-211ENST00000558314 FAM210AQ96ND0 272 aa9.76□□□□□ -0.85
TPM1-211ENST00000558314 VCYO14598 125 aa9.75□□□□□ -0.85
TPM1-211ENST00000558314 PRR3P79522 188 aaKnown RBP9.75□□□□□ -0.85
TPM1-211ENST00000558314 SYCNQ0VAF6 134 aa9.75□□□□□ -0.85
TPM1-211ENST00000558314 GAGE2BQ13066 116 aa9.75□□□□□ -0.85
TPM1-211ENST00000558314 CD164L2Q6UWJ8 174 aa9.75□□□□□ -0.85
TPM1-211ENST00000558314 TRAV13-1A0A0B4J241 112 aa9.74□□□□□ -0.85
TPM1-211ENST00000558314 TRBV27A0A0K0K1C4 114 aa9.74□□□□□ -0.85
TPM1-211ENST00000558314 ADIRFQ15847 76 aa9.74□□□□□ -0.85
TPM1-211ENST00000558314 MRPL52Q86TS9 123 aaKnown RBP9.74□□□□□ -0.85
TPM1-211ENST00000558314 NUP35Q8NFH5 326 aa9.74□□□□□ -0.85
TPM1-211ENST00000558314 SMDT1Q9H4I9 107 aa9.74□□□□□ -0.85
TPM1-211ENST00000558314 LINC00474Q9P2X8 69 aa9.74□□□□□ -0.85
TPM1-211ENST00000558314 PKIGQ9Y2B9 76 aa9.74□□□□□ -0.85
TPM1-211ENST00000558314 V9GYV3 84 aa9.74□□□□□ -0.85
TPM1-211ENST00000558314 UBR4Q5T4S7 5183 aa9.74□□□□□ -0.85
TPM1-211ENST00000558314 CAMPP49913 170 aa9.73□□□□□ -0.85
TPM1-211ENST00000558314 KIR2DL4Q99706 377 aa9.73□□□□□ -0.85
TPM1-211ENST00000558314 IGLV4-69A0A075B6H9 119 aa9.72□□□□□ -0.85
TPM1-211ENST00000558314 COX7A2LO14548 114 aa9.72□□□□□ -0.85
TPM1-211ENST00000558314 SUMO2P61956 95 aaKnown RBP9.72□□□□□ -0.85
TPM1-211ENST00000558314 PEA15Q15121 130 aa9.72□□□□□ -0.85
TPM1-211ENST00000558314 TMEM241Q24JQ0 296 aa9.72□□□□□ -0.85
TPM1-211ENST00000558314 C5orf38Q86SI9 138 aa9.72□□□□□ -0.85
TPM1-211ENST00000558314 NAT8BQ9UHF3 227 aa9.72□□□□□ -0.85
TPM1-211ENST00000558314 C1orf196B1AJZ1 125 aa9.71□□□□□ -0.86
TPM1-211ENST00000558314 ODF1Q14990 250 aa9.71□□□□□ -0.86
TPM1-211ENST00000558314 NRACQ8N912 160 aa9.71□□□□□ -0.86
TPM1-211ENST00000558314 ISOC2Q96AB3 205 aa9.71□□□□□ -0.86
TPM1-211ENST00000558314 CAMK2N2Q96S95 79 aa9.71□□□□□ -0.86
TPM1-211ENST00000558314 PPP1R17O96001 155 aa9.7□□□□□ -0.86
TPM1-211ENST00000558314 RPL23P62829 140 aaKnown RBP9.7□□□□□ -0.86
TPM1-211ENST00000558314 SMAGPQ0VAQ4 97 aa9.7□□□□□ -0.86
TPM1-211ENST00000558314 MRPL51Q4U2R6 128 aaKnown RBP9.7□□□□□ -0.86
TPM1-211ENST00000558314 FAM74A3Q4VXF1 159 aa9.7□□□□□ -0.86
TPM1-211ENST00000558314 Q6ZUT4 128 aa9.7□□□□□ -0.86
TPM1-211ENST00000558314 UBE2D4Q9Y2X8 147 aa9.7□□□□□ -0.86
TPM1-211ENST00000558314 LOC107984640A0A0U1RRK4 108 aa9.69□□□□□ -0.86
TPM1-211ENST00000558314 RPL18AQ02543 176 aaKnown RBP9.69□□□□□ -0.86
TPM1-211ENST00000558314 TMEM18Q96B42 140 aa9.69□□□□□ -0.86
TPM1-211ENST00000558314 PPP1R2P9O14990 202 aa9.68□□□□□ -0.86
TPM1-211ENST00000558314 CKS2P33552 79 aa9.68□□□□□ -0.86
TPM1-211ENST00000558314 PTTG1IPP53801 180 aa9.68□□□□□ -0.86
TPM1-211ENST00000558314 FAM104BQ5XKR9 115 aa9.68□□□□□ -0.86
TPM1-211ENST00000558314 A0A0J9YXV3 536 aa9.67□□□□□ -0.86
TPM1-211ENST00000558314 SPAG11BQ08648 103 aa9.67□□□□□ -0.86
TPM1-211ENST00000558314 CLLU1Q5K131 121 aa9.67□□□□□ -0.86
TPM1-211ENST00000558314 MRPL54Q6P161 138 aaKnown RBP9.67□□□□□ -0.86
TPM1-211ENST00000558314 Q6ZRP5 223 aa9.67□□□□□ -0.86
TPM1-211ENST00000558314 LINC01600Q96MT4 127 aa9.67□□□□□ -0.86
TPM1-211ENST00000558314 OPRPNQ99935 248 aaPredicted RBP9.67□□□□□ -0.86
TPM1-211ENST00000558314 NAT8Q9UHE5 227 aa9.67□□□□□ -0.86
TPM1-211ENST00000558314 C9JQL5 133 aa9.66□□□□□ -0.86
TPM1-211ENST00000558314 APOMO95445 188 aa9.66□□□□□ -0.86
TPM1-211ENST00000558314 RPL39P62891 51 aaKnown RBP9.66□□□□□ -0.86
TPM1-211ENST00000558314 REG3GQ6UW15 175 aa9.66□□□□□ -0.86
TPM1-211ENST00000558314 SPINK6Q6UWN8 80 aa9.66□□□□□ -0.86
TPM1-211ENST00000558314 SRSF3P84103 164 aaKnown RBP9.65□□□□□ -0.86
TPM1-211ENST00000558314 CSDC2Q9Y534 153 aaKnown RBP9.65□□□□□ -0.86
TPM1-211ENST00000558314 A0A1W2PNN7 141 aa9.64□□□□□ -0.87
TPM1-211ENST00000558314 SMIM27A0A1W2PRY6 76 aa9.64□□□□□ -0.87
TPM1-211ENST00000558314 D6R8Y8 96 aa9.64□□□□□ -0.87
TPM1-211ENST00000558314 TNFRSF6BO95407 300 aa9.64□□□□□ -0.87
TPM1-211ENST00000558314 C20orf78Q9BR46 151 aa9.64□□□□□ -0.87
TPM1-211ENST00000558314 LINC00862A6NCI5 91 aa9.63□□□□□ -0.87
TPM1-211ENST00000558314 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.63□□□□□ -0.87
TPM1-211ENST00000558314 TCAPO15273 167 aa9.63□□□□□ -0.87
TPM1-211ENST00000558314 MT-ND6P03923 174 aa9.63□□□□□ -0.87
TPM1-211ENST00000558314 C9orf116Q5BN46 136 aaPredicted RBP9.63□□□□□ -0.87
TPM1-211ENST00000558314 ORAOV1Q8WV07 137 aa9.63□□□□□ -0.87
TPM1-211ENST00000558314 A0A1B0GW15 77 aa9.62□□□□□ -0.87
TPM1-211ENST00000558314 IFITM10A6NMD0 228 aa9.62□□□□□ -0.87
TPM1-211ENST00000558314 C2orf48Q96LS8 159 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms