RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 OR1L4Q8NGR5 311 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 OPRPNQ99935 248 aaPredicted RBP3.08□□□□□ -1.92
ATXN3-239ENST00000556315 PARLQ9H300 379 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 TMEM14CQ9P0S9 112 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 RPH3ALQ9UNE2 315 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 URGCP-MRPS24S4R325 110 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 IGKV2-40A0A087WW87 121 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-239ENST00000556315 UBE2L5PA0A1B0GUS4 154 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 A0A1B0GV50 99 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 XKRY2A2RUG3 117 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 GNRH2O43555 120 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 IGKV2D-40P01614 121 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-239ENST00000556315 MT-ND6P03923 174 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 GZMBP10144 247 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 FABP4P15090 132 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 RPL29P47914 159 aaKnown RBP3.07□□□□□ -1.92
ATXN3-239ENST00000556315 Q6AWC8 147 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 RASL11AQ6T310 242 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 LINC01551Q86U37 167 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 C9orf163Q8N9P6 203 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 C11orf52Q96A22 123 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 DPH3Q96FX2 82 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 C14orf144Q96I85 54 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 MGST2Q99735 147 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 TMEM167BQ9NRX6 74 aa3.07□□□□□ -1.92
ATXN3-239ENST00000556315 NBEAP1P0C6P0 100 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 RAB4AP20338 218 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 FGF8P55075 233 aaPredicted RBP3.06□□□□□ -1.92
ATXN3-239ENST00000556315 TAS2R45P59539 299 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 KRTAP10-8P60410 259 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 Q0VG73 95 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 SRSF9Q13242 221 aaKnown RBP eCLIP3.06□□□□□ -1.92
ATXN3-239ENST00000556315 FAM162BQ5T6X4 162 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 ZC2HC1BQ5TFG8 222 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 CFAP126Q5VTH2 177 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 MIC13Q5XKP0 118 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 SDIM1Q6ZPB5 146 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 NIT1Q86X76 327 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 UBE2WQ96B02 151 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 SMIM12Q96EX1 92 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 ZC2HC1AQ96GY0 325 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 SFRP2Q96HF1 295 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 LINC00479Q96M42 142 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 GNB1LQ9BYB4 327 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 IL36BQ9NZH7 164 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 KLK12Q9UKR0 248 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 LENEPQ9Y5L5 61 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 TRAPPC1Q9Y5R8 145 aa3.06□□□□□ -1.92
ATXN3-239ENST00000556315 IGLV7-46A0A075B6I9 117 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 IGHV3-73A0A0B4J1V6 119 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 A0A0J9YXV3 536 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 A0A0U1RQV1 116 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 A0A1W2PRE2 83 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 RBAKDNA6NC62 111 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 M0R143 59 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 PYYP10082 97 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 MGST1P10620 155 aaKnown RBP3.05□□□□□ -1.92
ATXN3-239ENST00000556315 CSN1S1P47710 185 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 Q8TAT8 98 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 PTH2Q96A98 100 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 KCNS1Q96KK3 526 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 DNAJC30Q96LL9 226 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 CHCHD7Q9BUK0 85 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 OSTCQ9NRP0 149 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 NAGKQ9UJ70 344 aa3.05□□□□□ -1.92
ATXN3-239ENST00000556315 A0A087WX48 190 aa3.04□□□□□ -1.92
ATXN3-239ENST00000556315 TRAV21A0A0B4J279 112 aa3.04□□□□□ -1.92
ATXN3-239ENST00000556315 C20orf202A1L168 122 aa3.04□□□□□ -1.92
ATXN3-239ENST00000556315 NDUFAF8A1L188 74 aa3.04□□□□□ -1.92
ATXN3-239ENST00000556315 PGPA6NDG6 321 aa3.04□□□□□ -1.92
ATXN3-239ENST00000556315 PANO1I0J062 215 aa3.04□□□□□ -1.92
ATXN3-239ENST00000556315 GCHFRP30047 84 aa3.04□□□□□ -1.92
ATXN3-239ENST00000556315 CIRBPQ14011 172 aaKnown RBP3.04□□□□□ -1.92
ATXN3-239ENST00000556315 ZFP2Q6ZN57 461 aa3.04□□□□□ -1.92
ATXN3-239ENST00000556315 FAM231DQ6ZW35 169 aa3.04□□□□□ -1.92
ATXN3-239ENST00000556315 ZNF664Q8N3J9 261 aa3.04□□□□□ -1.92
ATXN3-239ENST00000556315 RNF185Q96GF1 192 aa3.04□□□□□ -1.92
ATXN3-239ENST00000556315 TMEM262E9PQX1 116 aa3.03□□□□□ -1.92
ATXN3-239ENST00000556315 HLA-DQA1P01909 254 aa3.03□□□□□ -1.92
ATXN3-239ENST00000556315 ARL14EPLP0DKL9 152 aa3.03□□□□□ -1.92
ATXN3-239ENST00000556315 LINC00694P0DN24 101 aa3.03□□□□□ -1.92
ATXN3-239ENST00000556315 GNG4P50150 75 aa3.03□□□□□ -1.92
ATXN3-239ENST00000556315 REG3GQ6UW15 175 aa3.03□□□□□ -1.92
ATXN3-239ENST00000556315 TEX43Q6ZNM6 134 aa3.03□□□□□ -1.92
ATXN3-239ENST00000556315 CMTM2Q8TAZ6 248 aa3.03□□□□□ -1.92
ATXN3-239ENST00000556315 C7orf33Q8WU49 177 aa3.03□□□□□ -1.92
ATXN3-239ENST00000556315 FAM167A-AS1Q96KT0 104 aa3.03□□□□□ -1.92
ATXN3-239ENST00000556315 C2orf48Q96LS8 159 aa3.03□□□□□ -1.92
ATXN3-239ENST00000556315 ALKBH7Q9BT30 221 aaPredicted RBP3.03□□□□□ -1.92
ATXN3-239ENST00000556315 SLC25A2Q9BXI2 301 aa3.03□□□□□ -1.92
ATXN3-239ENST00000556315 SMIM27A0A1W2PRY6 76 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 FAM231BA6NCW3 169 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 A8MWV9 139 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 TCAPO15273 167 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 CRPP02741 224 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 LINC00614P0C842 121 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 PMCHL1Q16048 86 aa3.02□□□□□ -1.93
ATXN3-239ENST00000556315 PDZD11Q5EBL8 140 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms