RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 MAJINQ3KP22 176 aa5.53□□□□□ -1.52
GTF2A1-204ENST00000556268 RASL11AQ6T310 242 aa5.53□□□□□ -1.52
GTF2A1-204ENST00000556268 STPG4Q8N801 248 aa5.53□□□□□ -1.52
GTF2A1-204ENST00000556268 SFT2D1Q8WV19 159 aa5.53□□□□□ -1.52
GTF2A1-204ENST00000556268 GVQW2A0A096LPI5 108 aaPredicted RBP5.52□□□□□ -1.53
GTF2A1-204ENST00000556268 C19orf71A6NCJ1 209 aa5.52□□□□□ -1.53
GTF2A1-204ENST00000556268 UMAD1C9J7I0 102 aa5.52□□□□□ -1.53
GTF2A1-204ENST00000556268 F2Z2F3 143 aa5.52□□□□□ -1.53
GTF2A1-204ENST00000556268 C9orf62Q8N4C0 152 aa5.52□□□□□ -1.53
GTF2A1-204ENST00000556268 RPL35P42766 123 aaKnown RBP5.51□□□□□ -1.53
GTF2A1-204ENST00000556268 RPS20P60866 119 aaKnown RBP5.51□□□□□ -1.53
GTF2A1-204ENST00000556268 REG3GQ6UW15 175 aa5.51□□□□□ -1.53
GTF2A1-204ENST00000556268 FER1L6-AS1Q8NA97 138 aa5.51□□□□□ -1.53
GTF2A1-204ENST00000556268 C11orf52Q96A22 123 aa5.51□□□□□ -1.53
GTF2A1-204ENST00000556268 LINC00474Q9P2X8 69 aa5.51□□□□□ -1.53
GTF2A1-204ENST00000556268 A0A096LNI7 61 aa5.5□□□□□ -1.53
GTF2A1-204ENST00000556268 IGKV2-24A0A0C4DH68 120 aa5.5□□□□□ -1.53
GTF2A1-204ENST00000556268 H7C423 109 aa5.5□□□□□ -1.53
GTF2A1-204ENST00000556268 MGPP08493 103 aa5.5□□□□□ -1.53
GTF2A1-204ENST00000556268 NTF3P20783 257 aa5.5□□□□□ -1.53
GTF2A1-204ENST00000556268 SULT1A2P50226 295 aa5.5□□□□□ -1.53
GTF2A1-204ENST00000556268 COTL1Q14019 142 aa5.5□□□□□ -1.53
GTF2A1-204ENST00000556268 HIGD2BQ4VC39 106 aa5.5□□□□□ -1.53
GTF2A1-204ENST00000556268 OR2D3Q8NGH3 330 aa5.5□□□□□ -1.53
GTF2A1-204ENST00000556268 LYPD6BQ8NI32 183 aa5.5□□□□□ -1.53
GTF2A1-204ENST00000556268 CHCHD10Q8WYQ3 142 aaPredicted RBP5.5□□□□□ -1.53
GTF2A1-204ENST00000556268 UBE2L6O14933 153 aa5.49□□□□□ -1.53
GTF2A1-204ENST00000556268 ARPC5O15511 151 aa5.49□□□□□ -1.53
GTF2A1-204ENST00000556268 PFDN1O60925 122 aa5.49□□□□□ -1.53
GTF2A1-204ENST00000556268 CCL20P78556 96 aa5.49□□□□□ -1.53
GTF2A1-204ENST00000556268 LYZL1Q6UWQ5 148 aa5.49□□□□□ -1.53
GTF2A1-204ENST00000556268 Q6ZRP5 223 aa5.49□□□□□ -1.53
GTF2A1-204ENST00000556268 KCNRGQ8N5I3 272 aa5.49□□□□□ -1.53
GTF2A1-204ENST00000556268 GATD1Q8NB37 220 aa5.49□□□□□ -1.53
GTF2A1-204ENST00000556268 CNFNQ9BYD5 112 aa5.49□□□□□ -1.53
GTF2A1-204ENST00000556268 TRAV1-1A0A0B4J248 108 aa5.48□□□□□ -1.53
GTF2A1-204ENST00000556268 FAM231BA6NCW3 169 aa5.48□□□□□ -1.53
GTF2A1-204ENST00000556268 NCR2O95944 276 aa5.48□□□□□ -1.53
GTF2A1-204ENST00000556268 TRGC1P0CF51 173 aa5.48□□□□□ -1.53
GTF2A1-204ENST00000556268 RPL24P83731 157 aaKnown RBP5.48□□□□□ -1.53
GTF2A1-204ENST00000556268 FAM213BQ8TBF2 198 aa5.48□□□□□ -1.53
GTF2A1-204ENST00000556268 SMIM12Q96EX1 92 aa5.48□□□□□ -1.53
GTF2A1-204ENST00000556268 TPPP3Q9BW30 176 aa5.48□□□□□ -1.53
GTF2A1-204ENST00000556268 A0A1B0GV50 99 aa5.47□□□□□ -1.53
GTF2A1-204ENST00000556268 XKRY2A2RUG3 117 aa5.47□□□□□ -1.53
GTF2A1-204ENST00000556268 RAB19A4D1S5 217 aa5.47□□□□□ -1.53
GTF2A1-204ENST00000556268 IFNA1P01562 189 aa5.47□□□□□ -1.53
GTF2A1-204ENST00000556268 FGF6P10767 208 aa5.47□□□□□ -1.53
GTF2A1-204ENST00000556268 ZNF345Q14585 488 aa5.47□□□□□ -1.53
GTF2A1-204ENST00000556268 CENPWQ5EE01 88 aa5.47□□□□□ -1.53
GTF2A1-204ENST00000556268 LCE1FQ5T754 118 aa5.47□□□□□ -1.53
GTF2A1-204ENST00000556268 OR5A1Q8NGJ0 315 aa5.47□□□□□ -1.53
GTF2A1-204ENST00000556268 IGLV5-45A0A087WSX0 123 aa5.46□□□□□ -1.54
GTF2A1-204ENST00000556268 IGHV1-58A0A0C4DH39 117 aa5.46□□□□□ -1.54
GTF2A1-204ENST00000556268 IGKV3OR2-268A0A0C4DH90 116 aa5.46□□□□□ -1.54
GTF2A1-204ENST00000556268 LINC00959A0A1B0GUT2 108 aa5.46□□□□□ -1.54
GTF2A1-204ENST00000556268 HMSDA8MTL9 139 aa5.46□□□□□ -1.54
GTF2A1-204ENST00000556268 ESDP10768 282 aa5.46□□□□□ -1.54
GTF2A1-204ENST00000556268 CTRLP40313 264 aa5.46□□□□□ -1.54
GTF2A1-204ENST00000556268 MANBALQ9NQG1 85 aa5.46□□□□□ -1.54
GTF2A1-204ENST00000556268 PKIGQ9Y2B9 76 aa5.46□□□□□ -1.54
GTF2A1-204ENST00000556268 TRBV20OR9-2A0A075B6H5 130 aa5.45□□□□□ -1.54
GTF2A1-204ENST00000556268 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.45□□□□□ -1.54
GTF2A1-204ENST00000556268 A0A1W2PNN7 141 aa5.45□□□□□ -1.54
GTF2A1-204ENST00000556268 IGKV2-29A2NJV5 120 aaPredicted RBP5.45□□□□□ -1.54
GTF2A1-204ENST00000556268 ZNF25P17030 456 aaPredicted RBP5.45□□□□□ -1.54
GTF2A1-204ENST00000556268 GNG4P50150 75 aa5.45□□□□□ -1.54
GTF2A1-204ENST00000556268 KRTAP10-5P60370 271 aa5.45□□□□□ -1.54
GTF2A1-204ENST00000556268 AMMECR1LQ6DCA0 310 aa5.45□□□□□ -1.54
GTF2A1-204ENST00000556268 LINC00526Q96FQ7 95 aa5.45□□□□□ -1.54
GTF2A1-204ENST00000556268 FAM210AQ96ND0 272 aa5.45□□□□□ -1.54
GTF2A1-204ENST00000556268 MUC2Q02817 5179 aa5.45□□□□□ -1.54
GTF2A1-204ENST00000556268 TRAV26-2A0A0B4J265 109 aa5.44□□□□□ -1.54
GTF2A1-204ENST00000556268 TRBV6-5A0A0K0K1A5 114 aa5.44□□□□□ -1.54
GTF2A1-204ENST00000556268 SMLR1H3BR10 107 aa5.44□□□□□ -1.54
GTF2A1-204ENST00000556268 FOXA3P55318 350 aaPredicted RBP5.44□□□□□ -1.54
GTF2A1-204ENST00000556268 SYCNQ0VAF6 134 aa5.44□□□□□ -1.54
GTF2A1-204ENST00000556268 RNASEKQ6P5S7 137 aaKnown RBP5.44□□□□□ -1.54
GTF2A1-204ENST00000556268 TEX261Q6UWH6 196 aa5.44□□□□□ -1.54
GTF2A1-204ENST00000556268 CD164L2Q6UWJ8 174 aa5.44□□□□□ -1.54
GTF2A1-204ENST00000556268 RPL39LQ96EH5 51 aaKnown RBP5.44□□□□□ -1.54
GTF2A1-204ENST00000556268 BIN3Q9NQY0 253 aa5.44□□□□□ -1.54
GTF2A1-204ENST00000556268 CDC42SE2Q9NRR3 84 aa5.44□□□□□ -1.54
GTF2A1-204ENST00000556268 GNG13Q9P2W3 67 aa5.44□□□□□ -1.54
GTF2A1-204ENST00000556268 SDHAF1A6NFY7 115 aa5.43□□□□□ -1.54
GTF2A1-204ENST00000556268 I3L3M4 83 aa5.43□□□□□ -1.54
GTF2A1-204ENST00000556268 CCL25O15444 150 aa5.43□□□□□ -1.54
GTF2A1-204ENST00000556268 PDE6DO43924 150 aa5.43□□□□□ -1.54
GTF2A1-204ENST00000556268 XCL1P47992 114 aa5.43□□□□□ -1.54
GTF2A1-204ENST00000556268 CARD19Q96LW7 228 aa5.43□□□□□ -1.54
GTF2A1-204ENST00000556268 LITAFQ99732 161 aa5.43□□□□□ -1.54
GTF2A1-204ENST00000556268 BCL2L11O43521 198 aa5.42□□□□□ -1.54
GTF2A1-204ENST00000556268 APCSP02743 223 aa5.42□□□□□ -1.54
GTF2A1-204ENST00000556268 POLR2KP53803 58 aaKnown RBP5.42□□□□□ -1.54
GTF2A1-204ENST00000556268 EIF5AP63241 154 aaKnown RBP5.42□□□□□ -1.54
GTF2A1-204ENST00000556268 MEF2BQ02080 365 aaPredicted RBP5.42□□□□□ -1.54
GTF2A1-204ENST00000556268 MRPL52Q86TS9 123 aaKnown RBP5.42□□□□□ -1.54
GTF2A1-204ENST00000556268 ZNF664Q8N3J9 261 aa5.42□□□□□ -1.54
GTF2A1-204ENST00000556268 BATF3Q9NR55 127 aa5.42□□□□□ -1.54
GTF2A1-204ENST00000556268 PSORS1C2Q9UIG4 136 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms