RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 LITAFQ99732 161 aa12.41□□□□□ -0.42
PPP4R3A-208ENST00000555462 Q9H8V8 135 aa12.41□□□□□ -0.42
PPP4R3A-208ENST00000555462 LINC00694P0DN24 101 aa12.41□□□□□ -0.42
PPP4R3A-208ENST00000555462 RHOHQ15669 191 aa12.41□□□□□ -0.42
PPP4R3A-208ENST00000555462 ODF3Q96PU9 254 aa12.4□□□□□ -0.42
PPP4R3A-208ENST00000555462 CHCHD5Q9BSY4 110 aa12.4□□□□□ -0.42
PPP4R3A-208ENST00000555462 TOMM7Q9P0U1 55 aa12.39□□□□□ -0.43
PPP4R3A-208ENST00000555462 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.39□□□□□ -0.43
PPP4R3A-208ENST00000555462 IGHV1-58A0A0C4DH39 117 aa12.39□□□□□ -0.43
PPP4R3A-208ENST00000555462 MEIG1Q5JSS6 88 aa12.39□□□□□ -0.43
PPP4R3A-208ENST00000555462 Q8N2B8 174 aa12.39□□□□□ -0.43
PPP4R3A-208ENST00000555462 TRGV1A0A0A0MS02 117 aa12.39□□□□□ -0.43
PPP4R3A-208ENST00000555462 VSIG2Q96IQ7 327 aa12.39□□□□□ -0.43
PPP4R3A-208ENST00000555462 NDUFV3P56181 108 aaKnown RBP12.38□□□□□ -0.43
PPP4R3A-208ENST00000555462 PIK3CD-AS1Q5SR53 167 aa12.38□□□□□ -0.43
PPP4R3A-208ENST00000555462 C11orf68Q9H3H3 251 aaKnown RBP12.38□□□□□ -0.43
PPP4R3A-208ENST00000555462 UCNP55089 124 aa12.38□□□□□ -0.43
PPP4R3A-208ENST00000555462 A0A0B4J2C4 111 aa12.37□□□□□ -0.43
PPP4R3A-208ENST00000555462 TMEM262E9PQX1 116 aa12.37□□□□□ -0.43
PPP4R3A-208ENST00000555462 SBSPONQ8IVN8 264 aa12.37□□□□□ -0.43
PPP4R3A-208ENST00000555462 PRB1P04280 392 aa12.37□□□□□ -0.43
PPP4R3A-208ENST00000555462 CHCHD7Q9BUK0 85 aa12.37□□□□□ -0.43
PPP4R3A-208ENST00000555462 TRGV11A0A075B6L2 103 aa12.37□□□□□ -0.43
PPP4R3A-208ENST00000555462 COX6CP09669 75 aa12.37□□□□□ -0.43
PPP4R3A-208ENST00000555462 TRBV10-2A0A0K0K1G8 114 aa12.36□□□□□ -0.43
PPP4R3A-208ENST00000555462 B4DSR2 109 aa12.36□□□□□ -0.43
PPP4R3A-208ENST00000555462 K7EMT4 169 aa12.36□□□□□ -0.43
PPP4R3A-208ENST00000555462 Q9HAA7 133 aa12.36□□□□□ -0.43
PPP4R3A-208ENST00000555462 UBE2D4Q9Y2X8 147 aa12.36□□□□□ -0.43
PPP4R3A-208ENST00000555462 TMEM101Q96IK0 257 aa12.36□□□□□ -0.43
PPP4R3A-208ENST00000555462 GAGE12JA6NER3 117 aa12.35□□□□□ -0.43
PPP4R3A-208ENST00000555462 GAGE4Q13068 117 aa12.35□□□□□ -0.43
PPP4R3A-208ENST00000555462 GAGE5Q13069 117 aa12.35□□□□□ -0.43
PPP4R3A-208ENST00000555462 ITPR2Q14571 2701 aa12.35□□□□□ -0.43
PPP4R3A-208ENST00000555462 RPL32P62910 135 aaKnown RBP12.35□□□□□ -0.43
PPP4R3A-208ENST00000555462 DYNLRB2Q8TF09 96 aa12.35□□□□□ -0.43
PPP4R3A-208ENST00000555462 CITED1Q99966 193 aa12.35□□□□□ -0.43
PPP4R3A-208ENST00000555462 IFITM1P13164 125 aa12.34□□□□□ -0.43
PPP4R3A-208ENST00000555462 MRPS36P82909 103 aaKnown RBP12.34□□□□□ -0.43
PPP4R3A-208ENST00000555462 GAGE6Q13070 117 aa12.34□□□□□ -0.43
PPP4R3A-208ENST00000555462 H3BUA1 57 aa12.34□□□□□ -0.43
PPP4R3A-208ENST00000555462 MIAQ16674 131 aa12.34□□□□□ -0.43
PPP4R3A-208ENST00000555462 SMIM20Q8N5G0 67 aa12.33□□□□□ -0.43
PPP4R3A-208ENST00000555462 PRIMA1Q86XR5 153 aa12.33□□□□□ -0.44
PPP4R3A-208ENST00000555462 WFDC10AQ9H1F0 79 aa12.33□□□□□ -0.44
PPP4R3A-208ENST00000555462 TRBV7-9A0A0J9YWB2 115 aa12.33□□□□□ -0.44
PPP4R3A-208ENST00000555462 LOC100131303A0A0U1RQF7 123 aa12.32□□□□□ -0.44
PPP4R3A-208ENST00000555462 VWFP04275 2813 aa12.32□□□□□ -0.44
PPP4R3A-208ENST00000555462 CITED2Q99967 270 aaPredicted RBP12.32□□□□□ -0.44
PPP4R3A-208ENST00000555462 TRBV30A0A0K0K1B3 111 aa12.31□□□□□ -0.44
PPP4R3A-208ENST00000555462 SOSTDC1Q6X4U4 206 aa12.31□□□□□ -0.44
PPP4R3A-208ENST00000555462 Q6ZTI0 123 aa12.31□□□□□ -0.44
PPP4R3A-208ENST00000555462 GAGE7O76087 117 aa12.29□□□□□ -0.44
PPP4R3A-208ENST00000555462 GAGE12FP0CL80 117 aa12.29□□□□□ -0.44
PPP4R3A-208ENST00000555462 GAGE12GP0CL81 117 aa12.29□□□□□ -0.44
PPP4R3A-208ENST00000555462 GAGE12IP0CL82 117 aa12.29□□□□□ -0.44
PPP4R3A-208ENST00000555462 KRTAP10-9P60411 292 aa12.28□□□□□ -0.44
PPP4R3A-208ENST00000555462 ZNF415Q09FC8 603 aa12.28□□□□□ -0.44
PPP4R3A-208ENST00000555462 LINC00308Q8TCZ7 52 aa12.28□□□□□ -0.44
PPP4R3A-208ENST00000555462 MAP6D1Q9H9H5 199 aa12.27□□□□□ -0.44
PPP4R3A-208ENST00000555462 RPL35AP18077 110 aaKnown RBP12.27□□□□□ -0.45
PPP4R3A-208ENST00000555462 LINC00242Q5T6M2 205 aa12.27□□□□□ -0.45
PPP4R3A-208ENST00000555462 TINCRA0A1B0GVN0 87 aa12.26□□□□□ -0.45
PPP4R3A-208ENST00000555462 PFN2P35080 140 aa12.26□□□□□ -0.45
PPP4R3A-208ENST00000555462 NOP10Q9NPE3 64 aaKnown RBP12.26□□□□□ -0.45
PPP4R3A-208ENST00000555462 ATP5G1P05496 136 aa12.26□□□□□ -0.45
PPP4R3A-208ENST00000555462 ZNF702PQ9H963 129 aa12.26□□□□□ -0.45
PPP4R3A-208ENST00000555462 LST1O00453 97 aa12.26□□□□□ -0.45
PPP4R3A-208ENST00000555462 FAM218AQ96MZ4 157 aa12.26□□□□□ -0.45
PPP4R3A-208ENST00000555462 CIRBPQ14011 172 aaKnown RBP12.25□□□□□ -0.45
PPP4R3A-208ENST00000555462 FAM236AA0A1B0GUQ0 79 aa12.25□□□□□ -0.45
PPP4R3A-208ENST00000555462 FAM236BA0A1B0GV22 79 aa12.25□□□□□ -0.45
PPP4R3A-208ENST00000555462 CLPSL2Q6UWE3 100 aa12.25□□□□□ -0.45
PPP4R3A-208ENST00000555462 VPREB3Q9UKI3 123 aa12.24□□□□□ -0.45
PPP4R3A-208ENST00000555462 UBR5O95071 2799 aaPredicted RBP12.24□□□□□ -0.45
PPP4R3A-208ENST00000555462 A0A096LPF7 62 aa12.24□□□□□ -0.45
PPP4R3A-208ENST00000555462 GAGE2AQ6NT46 116 aa12.24□□□□□ -0.45
PPP4R3A-208ENST00000555462 PYGO1Q9Y3Y4 419 aa12.24□□□□□ -0.45
PPP4R3A-208ENST00000555462 DAZ2Q13117 558 aaKnown RBP12.23□□□□□ -0.45
PPP4R3A-208ENST00000555462 NTM-AS1Q6ZSK4 140 aa12.23□□□□□ -0.45
PPP4R3A-208ENST00000555462 DAZ4Q86SG3 579 aaKnown RBP12.23□□□□□ -0.45
PPP4R3A-208ENST00000555462 DAZ3Q9NR90 486 aaKnown RBP12.23□□□□□ -0.45
PPP4R3A-208ENST00000555462 BRI3O95415 125 aa12.23□□□□□ -0.45
PPP4R3A-208ENST00000555462 Q96MF0 132 aa12.22□□□□□ -0.45
PPP4R3A-208ENST00000555462 STHQ8IWL8 128 aa12.22□□□□□ -0.45
PPP4R3A-208ENST00000555462 LINC01356Q8N9X3 169 aa12.22□□□□□ -0.45
PPP4R3A-208ENST00000555462 SLPIP03973 132 aa12.22□□□□□ -0.45
PPP4R3A-208ENST00000555462 BAALC-AS2P0C853 105 aa12.22□□□□□ -0.45
PPP4R3A-208ENST00000555462 C11orf72Q8NBR9 251 aa12.22□□□□□ -0.45
PPP4R3A-208ENST00000555462 SMCR5Q8TEV8 140 aa12.22□□□□□ -0.45
PPP4R3A-208ENST00000555462 SPANXA1Q9NS26 97 aa12.22□□□□□ -0.45
PPP4R3A-208ENST00000555462 C5orf38Q86SI9 138 aa12.21□□□□□ -0.45
PPP4R3A-208ENST00000555462 SPANXDQ9BXN6 97 aa12.21□□□□□ -0.45
PPP4R3A-208ENST00000555462 SPANXCQ9NY87 97 aa12.21□□□□□ -0.45
PPP4R3A-208ENST00000555462 TRGV2A0A075B6R0 118 aa12.21□□□□□ -0.46
PPP4R3A-208ENST00000555462 TMEM89A2RUT3 159 aa12.2□□□□□ -0.46
PPP4R3A-208ENST00000555462 C9orf129Q5T035 196 aaKnown RBP12.2□□□□□ -0.46
PPP4R3A-208ENST00000555462 OR13C6PQ8NH95 151 aa12.2□□□□□ -0.46
PPP4R3A-208ENST00000555462 HECTD1Q9ULT8 2610 aa12.2□□□□□ -0.46
PPP4R3A-208ENST00000555462 FASNP49327 2511 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms