RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 LOC107984640A0A0U1RRK4 108 aa14.93□□□□□ -0.02
FOXA1-204ENST00000554607 BCL2P10415 239 aa14.93□□□□□ -0.02
FOXA1-204ENST00000554607 TRBV6-5A0A0K0K1A5 114 aa14.92□□□□□ -0.02
FOXA1-204ENST00000554607 ESDP10768 282 aa14.92□□□□□ -0.02
FOXA1-204ENST00000554607 CAMPP49913 170 aa14.92□□□□□ -0.02
FOXA1-204ENST00000554607 FOXA3P55318 350 aaPredicted RBP14.92□□□□□ -0.02
FOXA1-204ENST00000554607 MRAP2Q96G30 205 aa14.92□□□□□ -0.02
FOXA1-204ENST00000554607 GAGE2BQ13066 116 aa14.91□□□□□ -0.02
FOXA1-204ENST00000554607 CDC42SE2Q9NRR3 84 aa14.91□□□□□ -0.02
FOXA1-204ENST00000554607 TAGLN2P37802 199 aaKnown RBP14.9□□□□□ -0.02
FOXA1-204ENST00000554607 MRPL52Q86TS9 123 aaKnown RBP14.9□□□□□ -0.02
FOXA1-204ENST00000554607 OCC1Q8TAD7 63 aa14.9□□□□□ -0.02
FOXA1-204ENST00000554607 ST20Q9HBF5 79 aa14.89□□□□□ -0.03
FOXA1-204ENST00000554607 K7EN84 100 aa14.88□□□□□ -0.03
FOXA1-204ENST00000554607 TSHBP01222 138 aa14.88□□□□□ -0.03
FOXA1-204ENST00000554607 ZNF664Q8N3J9 261 aa14.88□□□□□ -0.03
FOXA1-204ENST00000554607 IGLV4-69A0A075B6H9 119 aa14.87□□□□□ -0.03
FOXA1-204ENST00000554607 MALP21145 153 aa14.87□□□□□ -0.03
FOXA1-204ENST00000554607 TMEM242Q9NWH2 141 aa14.87□□□□□ -0.03
FOXA1-204ENST00000554607 A0A1W2PNN7 141 aa14.86□□□□□ -0.03
FOXA1-204ENST00000554607 MT-ND6P03923 174 aa14.86□□□□□ -0.03
FOXA1-204ENST00000554607 A8MWL6 223 aa14.85□□□□□ -0.03
FOXA1-204ENST00000554607 C1orf196B1AJZ1 125 aa14.85□□□□□ -0.03
FOXA1-204ENST00000554607 NUP35Q8NFH5 326 aa14.85□□□□□ -0.03
FOXA1-204ENST00000554607 PSORS1C2Q9UIG4 136 aa14.85□□□□□ -0.03
FOXA1-204ENST00000554607 COX7A2LO14548 114 aa14.84□□□□□ -0.03
FOXA1-204ENST00000554607 GATCO43716 136 aaKnown RBP14.84□□□□□ -0.03
FOXA1-204ENST00000554607 APOMO95445 188 aa14.84□□□□□ -0.03
FOXA1-204ENST00000554607 BORCS7Q96B45 105 aa14.84□□□□□ -0.03
FOXA1-204ENST00000554607 CAMK2N2Q96S95 79 aa14.84□□□□□ -0.03
FOXA1-204ENST00000554607 C7orf77A4D0Y5 90 aa14.83□□□□□ -0.04
FOXA1-204ENST00000554607 TRBV27A0A0K0K1C4 114 aa14.82□□□□□ -0.04
FOXA1-204ENST00000554607 POLR2KP53803 58 aaKnown RBP14.82□□□□□ -0.04
FOXA1-204ENST00000554607 SMAGPQ0VAQ4 97 aa14.82□□□□□ -0.04
FOXA1-204ENST00000554607 C9orf116Q5BN46 136 aaPredicted RBP14.82□□□□□ -0.04
FOXA1-204ENST00000554607 C2orf48Q96LS8 159 aa14.82□□□□□ -0.04
FOXA1-204ENST00000554607 LPAP08519 4548 aa14.81□□□□□ -0.04
FOXA1-204ENST00000554607 C1orf137Q5JT78 98 aa14.81□□□□□ -0.04
FOXA1-204ENST00000554607 FAM231DQ6ZW35 169 aa14.81□□□□□ -0.04
FOXA1-204ENST00000554607 TMEM191AQ9H0A3 160 aa14.79□□□□□ -0.04
FOXA1-204ENST00000554607 CSDC2Q9Y534 153 aaKnown RBP14.79□□□□□ -0.04
FOXA1-204ENST00000554607 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.78□□□□□ -0.04
FOXA1-204ENST00000554607 RPL18AQ02543 176 aaKnown RBP14.78□□□□□ -0.04
FOXA1-204ENST00000554607 CT83Q5H943 113 aa14.78□□□□□ -0.04
FOXA1-204ENST00000554607 VCYO14598 125 aa14.77□□□□□ -0.05
FOXA1-204ENST00000554607 DIRC1Q969H9 104 aa14.77□□□□□ -0.05
FOXA1-204ENST00000554607 FCER1GP30273 86 aa14.76□□□□□ -0.05
FOXA1-204ENST00000554607 RNF151Q2KHN1 245 aa14.76□□□□□ -0.05
FOXA1-204ENST00000554607 PHF5AQ7RTV0 110 aaKnown RBP14.76□□□□□ -0.05
FOXA1-204ENST00000554607 A0A1B0GUT8 65 aa14.75□□□□□ -0.05
FOXA1-204ENST00000554607 TMEM250H0YL14 139 aa14.75□□□□□ -0.05
FOXA1-204ENST00000554607 RAB4AP20338 218 aa14.75□□□□□ -0.05
FOXA1-204ENST00000554607 TSKUQ8WUA8 353 aa14.75□□□□□ -0.05
FOXA1-204ENST00000554607 TRAV13-1A0A0B4J241 112 aa14.74□□□□□ -0.05
FOXA1-204ENST00000554607 SLC51BQ86UW2 128 aa14.74□□□□□ -0.05
FOXA1-204ENST00000554607 UBE2D4Q9Y2X8 147 aa14.74□□□□□ -0.05
FOXA1-204ENST00000554607 PPP1R17O96001 155 aa14.73□□□□□ -0.05
FOXA1-204ENST00000554607 IGLV7-43P04211 117 aa14.73□□□□□ -0.05
FOXA1-204ENST00000554607 C5orf38Q86SI9 138 aa14.73□□□□□ -0.05
FOXA1-204ENST00000554607 PRR26Q8N8Z3 221 aa14.73□□□□□ -0.05
FOXA1-204ENST00000554607 SPAG11BQ08648 103 aa14.72□□□□□ -0.05
FOXA1-204ENST00000554607 OPRPNQ99935 248 aaPredicted RBP14.72□□□□□ -0.05
FOXA1-204ENST00000554607 HIGD1CA8MV81 97 aa14.71□□□□□ -0.05
FOXA1-204ENST00000554607 AMN1Q8IY45 258 aa14.71□□□□□ -0.05
FOXA1-204ENST00000554607 KIR2DL4Q99706 377 aa14.71□□□□□ -0.05
FOXA1-204ENST00000554607 F8WDY8 70 aa14.7□□□□□ -0.06
FOXA1-204ENST00000554607 RNASE13Q5GAN3 156 aaKnown RBP14.7□□□□□ -0.06
FOXA1-204ENST00000554607 OR10D4PQ8NGN7 298 aa14.7□□□□□ -0.06
FOXA1-204ENST00000554607 TMEM18Q96B42 140 aa14.69□□□□□ -0.06
FOXA1-204ENST00000554607 IMMP2LQ96T52 175 aa14.69□□□□□ -0.06
FOXA1-204ENST00000554607 MRPL35Q9NZE8 188 aaKnown RBP14.69□□□□□ -0.06
FOXA1-204ENST00000554607 A0A087WZ39 114 aa14.68□□□□□ -0.06
FOXA1-204ENST00000554607 H0Y9J4 135 aa14.68□□□□□ -0.06
FOXA1-204ENST00000554607 SUMO2P61956 95 aaKnown RBP14.68□□□□□ -0.06
FOXA1-204ENST00000554607 TIMM21Q9BVV7 248 aa14.68□□□□□ -0.06
FOXA1-204ENST00000554607 IGLV1-50A0A075B6I6 118 aa14.66□□□□□ -0.06
FOXA1-204ENST00000554607 PPP1R2P9O14990 202 aa14.66□□□□□ -0.06
FOXA1-204ENST00000554607 RIGQ13278 110 aa14.66□□□□□ -0.06
FOXA1-204ENST00000554607 SMKR1H3BMG3 65 aa14.65□□□□□ -0.06
FOXA1-204ENST00000554607 CEBPGP53567 150 aa14.65□□□□□ -0.06
FOXA1-204ENST00000554607 Q6ZUT4 128 aa14.65□□□□□ -0.06
FOXA1-204ENST00000554607 NRACQ8N912 160 aa14.65□□□□□ -0.06
FOXA1-204ENST00000554607 NDUFA1O15239 70 aa14.64□□□□□ -0.07
FOXA1-204ENST00000554607 TMEM241Q24JQ0 296 aa14.64□□□□□ -0.07
FOXA1-204ENST00000554607 ORAOV1Q8WV07 137 aa14.64□□□□□ -0.07
FOXA1-204ENST00000554607 BLOC1S1P78537 153 aa14.63□□□□□ -0.07
FOXA1-204ENST00000554607 OSTCQ9NRP0 149 aa14.63□□□□□ -0.07
FOXA1-204ENST00000554607 TLX1NBP0CAT3 122 aa14.62□□□□□ -0.07
FOXA1-204ENST00000554607 LINC01551Q86U37 167 aa14.62□□□□□ -0.07
FOXA1-204ENST00000554607 TCTE3Q8IZS6 198 aa14.62□□□□□ -0.07
FOXA1-204ENST00000554607 TCAPO15273 167 aa14.61□□□□□ -0.07
FOXA1-204ENST00000554607 SMIM7Q9BQ49 75 aa14.61□□□□□ -0.07
FOXA1-204ENST00000554607 FAM168BA1KXE4 195 aa14.6□□□□□ -0.07
FOXA1-204ENST00000554607 IGHV3OR16-9A0A0B4J2B5 98 aa14.59□□□□□ -0.07
FOXA1-204ENST00000554607 KRTAP11-1Q8IUC1 163 aa14.59□□□□□ -0.07
FOXA1-204ENST00000554607 C20orf78Q9BR46 151 aa14.59□□□□□ -0.07
FOXA1-204ENST00000554607 UBE2D1P51668 147 aa14.58□□□□□ -0.08
FOXA1-204ENST00000554607 FAM19A5Q7Z5A7 132 aaPredicted RBP14.58□□□□□ -0.08
FOXA1-204ENST00000554607 KRTAP1-4P0C5Y4 121 aa14.57□□□□□ -0.08
FOXA1-204ENST00000554607 RPL13AP40429 203 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 214.1 ms