RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 ESRGQ1W209 222 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 LINC00242Q5T6M2 205 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 Q6JHZ5 121 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 DAND5Q8N907 189 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 CCL19Q99731 98 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 LINC00474Q9P2X8 69 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 SPRR3Q9UBC9 169 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 V9GYV3 84 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 MALRD1Q5VYJ5 2156 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 DNAJC13O75165 2243 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 IQCF6A8MYZ5 107 aa3.59□□□□□ -1.83
PFDN5-219ENST00000553171 SAA1P0DJI8 122 aaPredicted RBP3.59□□□□□ -1.83
PFDN5-219ENST00000553171 ARL14EPLP0DKL9 152 aa3.59□□□□□ -1.83
PFDN5-219ENST00000553171 EGR2P11161 476 aaPredicted RBP3.59□□□□□ -1.83
PFDN5-219ENST00000553171 NPPCP23582 126 aa3.59□□□□□ -1.83
PFDN5-219ENST00000553171 EIF4EBP1Q13541 118 aaPredicted RBP3.59□□□□□ -1.83
PFDN5-219ENST00000553171 MRPL51Q4U2R6 128 aaKnown RBP3.59□□□□□ -1.83
PFDN5-219ENST00000553171 LYPD5Q6UWN5 251 aa3.59□□□□□ -1.83
PFDN5-219ENST00000553171 SCXQ7RTU7 201 aa3.59□□□□□ -1.83
PFDN5-219ENST00000553171 RPRMLQ8N4K4 120 aa3.59□□□□□ -1.83
PFDN5-219ENST00000553171 FAM216BQ8N7L0 139 aa3.59□□□□□ -1.83
PFDN5-219ENST00000553171 CHCHD10Q8WYQ3 142 aaPredicted RBP3.59□□□□□ -1.83
PFDN5-219ENST00000553171 LYSTQ99698 3801 aa3.59□□□□□ -1.83
PFDN5-219ENST00000553171 ZNF706Q9Y5V0 76 aaPredicted RBP3.59□□□□□ -1.83
PFDN5-219ENST00000553171 MUC4Q99102 2169 aa3.58□□□□□ -1.84
PFDN5-219ENST00000553171 A0A087X002 238 aa3.58□□□□□ -1.84
PFDN5-219ENST00000553171 TEX49A0A1B0GTD5 131 aa3.58□□□□□ -1.84
PFDN5-219ENST00000553171 A0A1B0GW54 56 aa3.58□□□□□ -1.84
PFDN5-219ENST00000553171 LINC01549A6NIU2 74 aa3.58□□□□□ -1.84
PFDN5-219ENST00000553171 A6NN06 94 aa3.58□□□□□ -1.84
PFDN5-219ENST00000553171 ZNHIT1O43257 154 aa3.58□□□□□ -1.84
PFDN5-219ENST00000553171 IGLV2-14P01704 120 aa3.58□□□□□ -1.84
PFDN5-219ENST00000553171 IGHV3-9P01782 118 aa3.58□□□□□ -1.84
PFDN5-219ENST00000553171 CD28P10747 220 aa3.58□□□□□ -1.84
PFDN5-219ENST00000553171 ZFP36P26651 326 aaKnown RBP3.58□□□□□ -1.84
PFDN5-219ENST00000553171 ASB16-AS1Q495Z4 193 aa3.58□□□□□ -1.84
PFDN5-219ENST00000553171 C2orf82Q6UX34 121 aa3.58□□□□□ -1.84
PFDN5-219ENST00000553171 FAM223AQ8IWN6 122 aa3.58□□□□□ -1.84
PFDN5-219ENST00000553171 ZNF414Q96IQ9 312 aa3.58□□□□□ -1.84
PFDN5-219ENST00000553171 IMMP1LQ96LU5 166 aa3.58□□□□□ -1.84
PFDN5-219ENST00000553171 RAI1Q7Z5J4 1906 aaPredicted RBP3.58□□□□□ -1.84
PFDN5-219ENST00000553171 IGKV1D-17A0A075B6S4 117 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 TRAV7A0A075B6U4 112 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 A0A096LNT2 108 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 IGHV1-45A0A0A0MS14 117 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 LINC01548A6NM66 108 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 EDDM3BP56851 147 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 PLGLAQ15195 96 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 ATP5EP2Q5VTU8 51 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 LINC00173Q6ZV60 143 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 VMO1Q7Z5L0 202 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 Q8N7P7 452 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 ZNF491Q8N8L2 437 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 ITLN1Q8WWA0 313 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 URB1-AS1Q96HZ7 61 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 TIMM21Q9BVV7 248 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 ZNF702PQ9H963 129 aa3.57□□□□□ -1.84
PFDN5-219ENST00000553171 IGHV3OR16-13A0A075B7E8 117 aa3.56□□□□□ -1.84
PFDN5-219ENST00000553171 IGHV3-20A0A0C4DH32 117 aa3.56□□□□□ -1.84
PFDN5-219ENST00000553171 TRBV6-1A0A0K0K1D8 114 aa3.56□□□□□ -1.84
PFDN5-219ENST00000553171 ZNF138P52744 262 aa3.56□□□□□ -1.84
PFDN5-219ENST00000553171 CRIP2P52943 208 aaPredicted RBP3.56□□□□□ -1.84
PFDN5-219ENST00000553171 HOXA4Q00056 320 aaPredicted RBP3.56□□□□□ -1.84
PFDN5-219ENST00000553171 C2orf83Q53S99 150 aa3.56□□□□□ -1.84
PFDN5-219ENST00000553171 S100A7L2Q5SY68 101 aa3.56□□□□□ -1.84
PFDN5-219ENST00000553171 KPRPQ5T749 579 aaPredicted RBP3.56□□□□□ -1.84
PFDN5-219ENST00000553171 NRACQ8N912 160 aa3.56□□□□□ -1.84
PFDN5-219ENST00000553171 ZNRF1Q8ND25 227 aa3.56□□□□□ -1.84
PFDN5-219ENST00000553171 MPLKIPQ8TAP9 179 aa3.56□□□□□ -1.84
PFDN5-219ENST00000553171 CLEC2BQ92478 149 aa3.56□□□□□ -1.84
PFDN5-219ENST00000553171 TMEM14BQ9NUH8 114 aa3.56□□□□□ -1.84
PFDN5-219ENST00000553171 PRR14LQ5THK1 2151 aa3.55□□□□□ -1.84
PFDN5-219ENST00000553171 C17orf98A8MV24 154 aa3.55□□□□□ -1.84
PFDN5-219ENST00000553171 ATP6V0E1O15342 81 aa3.55□□□□□ -1.84
PFDN5-219ENST00000553171 ERHP84090 104 aaKnown RBP3.55□□□□□ -1.84
PFDN5-219ENST00000553171 CASC10Q5T4H9 136 aa3.55□□□□□ -1.84
PFDN5-219ENST00000553171 SPANXN1Q5VSR9 72 aa3.55□□□□□ -1.84
PFDN5-219ENST00000553171 PATE2Q6UY27 113 aa3.55□□□□□ -1.84
PFDN5-219ENST00000553171 Q6ZSV7 163 aa3.55□□□□□ -1.84
PFDN5-219ENST00000553171 C20orf197Q8N268 126 aa3.55□□□□□ -1.84
PFDN5-219ENST00000553171 LINC01560Q8TB33 94 aa3.55□□□□□ -1.84
PFDN5-219ENST00000553171 NABP2Q9BQ15 211 aa3.55□□□□□ -1.84
PFDN5-219ENST00000553171 KIAA2026Q5HYC2 2103 aa3.55□□□□□ -1.84
PFDN5-219ENST00000553171 KIAA1549Q9HCM3 1950 aa3.54□□□□□ -1.84
PFDN5-219ENST00000553171 CSMD3Q7Z407 3707 aa3.54□□□□□ -1.84
PFDN5-219ENST00000553171 FAM223BA6NKX1 122 aa3.54□□□□□ -1.84
PFDN5-219ENST00000553171 PRB2P02812 416 aaPredicted RBP3.54□□□□□ -1.84
PFDN5-219ENST00000553171 CCL3P10147 92 aa3.54□□□□□ -1.84
PFDN5-219ENST00000553171 ZNF22P17026 224 aaPredicted RBP3.54□□□□□ -1.84
PFDN5-219ENST00000553171 FCER1GP30273 86 aa3.54□□□□□ -1.84
PFDN5-219ENST00000553171 PRCDQ00LT1 54 aa3.54□□□□□ -1.84
PFDN5-219ENST00000553171 SOSTDC1Q6X4U4 206 aa3.54□□□□□ -1.84
PFDN5-219ENST00000553171 LINC00269Q8N2A0 174 aa3.54□□□□□ -1.84
PFDN5-219ENST00000553171 LYPD1Q8N2G4 141 aa3.54□□□□□ -1.84
PFDN5-219ENST00000553171 PROK2Q9HC23 129 aa3.54□□□□□ -1.84
PFDN5-219ENST00000553171 PRO1854Q9UHT4 67 aa3.54□□□□□ -1.84
PFDN5-219ENST00000553171 DMBT1Q9UGM3 2413 aaPredicted RBP3.53□□□□□ -1.84
PFDN5-219ENST00000553171 DOCK11Q5JSL3 2073 aa3.53□□□□□ -1.84
PFDN5-219ENST00000553171 FRAS1Q86XX4 4008 aa3.53□□□□□ -1.84
PFDN5-219ENST00000553171 IGHV3-15A0A0B4J1V0 119 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms