RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 UBR4Q5T4S7 5183 aa7.81□□□□□ -1.16
CKAP4-202ENST00000552828 TRBV6-8A0A0A6YYG3 113 aa7.8□□□□□ -1.16
CKAP4-202ENST00000552828 TRAV26-2A0A0B4J265 109 aa7.8□□□□□ -1.16
CKAP4-202ENST00000552828 HLA-DQA1P01909 254 aa7.8□□□□□ -1.16
CKAP4-202ENST00000552828 Q8N3U1 123 aa7.8□□□□□ -1.16
CKAP4-202ENST00000552828 RAB4AP20338 218 aa7.79□□□□□ -1.16
CKAP4-202ENST00000552828 CAMPP49913 170 aa7.79□□□□□ -1.16
CKAP4-202ENST00000552828 KRTAP10-4P60372 401 aaPredicted RBP7.79□□□□□ -1.16
CKAP4-202ENST00000552828 TMEM136Q6ZRR5 245 aa7.79□□□□□ -1.16
CKAP4-202ENST00000552828 NIT1Q86X76 327 aa7.79□□□□□ -1.16
CKAP4-202ENST00000552828 C14orf144Q96I85 54 aa7.79□□□□□ -1.16
CKAP4-202ENST00000552828 COX11Q9Y6N1 276 aa7.79□□□□□ -1.16
CKAP4-202ENST00000552828 TRBV25-1A0A075B6N4 114 aa7.78□□□□□ -1.16
CKAP4-202ENST00000552828 A0A087WX48 190 aa7.78□□□□□ -1.16
CKAP4-202ENST00000552828 TMEM262E9PQX1 116 aa7.78□□□□□ -1.16
CKAP4-202ENST00000552828 MRPL54Q6P161 138 aaKnown RBP7.78□□□□□ -1.16
CKAP4-202ENST00000552828 NTM-AS1Q6ZSK4 140 aa7.78□□□□□ -1.16
CKAP4-202ENST00000552828 AMN1Q8IY45 258 aa7.78□□□□□ -1.16
CKAP4-202ENST00000552828 ZNF664Q8N3J9 261 aa7.78□□□□□ -1.16
CKAP4-202ENST00000552828 RPL39LQ96EH5 51 aaKnown RBP7.78□□□□□ -1.16
CKAP4-202ENST00000552828 MRAP2Q96G30 205 aa7.78□□□□□ -1.16
CKAP4-202ENST00000552828 RNF185Q96GF1 192 aa7.78□□□□□ -1.16
CKAP4-202ENST00000552828 LECT2O14960 151 aa7.77□□□□□ -1.17
CKAP4-202ENST00000552828 LINC00310P59036 64 aa7.77□□□□□ -1.17
CKAP4-202ENST00000552828 HBBP68871 147 aa7.77□□□□□ -1.17
CKAP4-202ENST00000552828 SERTAD4-AS1Q5TG53 156 aa7.77□□□□□ -1.17
CKAP4-202ENST00000552828 FAM104BQ5XKR9 115 aa7.77□□□□□ -1.17
CKAP4-202ENST00000552828 SCXQ7RTU7 201 aa7.77□□□□□ -1.17
CKAP4-202ENST00000552828 ATP5L2Q7Z4Y8 100 aa7.77□□□□□ -1.17
CKAP4-202ENST00000552828 MRPL52Q86TS9 123 aaKnown RBP7.77□□□□□ -1.17
CKAP4-202ENST00000552828 CHCHD5Q9BSY4 110 aa7.77□□□□□ -1.17
CKAP4-202ENST00000552828 CHCHD7Q9BUK0 85 aa7.77□□□□□ -1.17
CKAP4-202ENST00000552828 IGHV1-24A0A0C4DH33 117 aa7.76□□□□□ -1.17
CKAP4-202ENST00000552828 TRBV6-5A0A0K0K1A5 114 aa7.76□□□□□ -1.17
CKAP4-202ENST00000552828 A0A1B0GXF2 115 aa7.76□□□□□ -1.17
CKAP4-202ENST00000552828 NUPR1O60356 82 aa7.76□□□□□ -1.17
CKAP4-202ENST00000552828 PPP1R17O96001 155 aa7.76□□□□□ -1.17
CKAP4-202ENST00000552828 COTL1Q14019 142 aa7.76□□□□□ -1.17
CKAP4-202ENST00000552828 BAGE3Q86Y29 109 aa7.76□□□□□ -1.17
CKAP4-202ENST00000552828 Q8N976 141 aa7.76□□□□□ -1.17
CKAP4-202ENST00000552828 BAALCQ8WXS3 180 aa7.76□□□□□ -1.17
CKAP4-202ENST00000552828 C2orf88Q9BSF0 95 aa7.76□□□□□ -1.17
CKAP4-202ENST00000552828 CHAC1Q9BUX1 264 aa7.76□□□□□ -1.17
CKAP4-202ENST00000552828 PRO1933Q9H354 126 aa7.76□□□□□ -1.17
CKAP4-202ENST00000552828 ST20Q9HBF5 79 aa7.76□□□□□ -1.17
CKAP4-202ENST00000552828 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.75□□□□□ -1.17
CKAP4-202ENST00000552828 SDHAF1A6NFY7 115 aa7.75□□□□□ -1.17
CKAP4-202ENST00000552828 SERF1AO75920 110 aa7.75□□□□□ -1.17
CKAP4-202ENST00000552828 SCGB1D1O95968 90 aa7.75□□□□□ -1.17
CKAP4-202ENST00000552828 OXTP01178 125 aa7.75□□□□□ -1.17
CKAP4-202ENST00000552828 TEX43Q6ZNM6 134 aa7.75□□□□□ -1.17
CKAP4-202ENST00000552828 RMI2Q96E14 147 aa7.75□□□□□ -1.17
CKAP4-202ENST00000552828 PKHD1L1Q86WI1 4243 aa7.74□□□□□ -1.17
CKAP4-202ENST00000552828 SMKR1H3BMG3 65 aa7.74□□□□□ -1.17
CKAP4-202ENST00000552828 I3L3M4 83 aa7.74□□□□□ -1.17
CKAP4-202ENST00000552828 GAS8-AS1O95177 125 aa7.74□□□□□ -1.17
CKAP4-202ENST00000552828 NCR2O95944 276 aa7.74□□□□□ -1.17
CKAP4-202ENST00000552828 APCSP02743 223 aa7.74□□□□□ -1.17
CKAP4-202ENST00000552828 PMCHP20382 165 aa7.74□□□□□ -1.17
CKAP4-202ENST00000552828 CKS2P33552 79 aa7.74□□□□□ -1.17
CKAP4-202ENST00000552828 LINC01620Q4KN68 170 aa7.74□□□□□ -1.17
CKAP4-202ENST00000552828 MRPL51Q4U2R6 128 aaKnown RBP7.74□□□□□ -1.17
CKAP4-202ENST00000552828 TMEM243Q9BU79 118 aa7.74□□□□□ -1.17
CKAP4-202ENST00000552828 KLK12Q9UKR0 248 aa7.74□□□□□ -1.17
CKAP4-202ENST00000552828 AMTP48728 403 aa7.73□□□□□ -1.17
CKAP4-202ENST00000552828 GAGE6Q13070 117 aa7.73□□□□□ -1.17
CKAP4-202ENST00000552828 MPV17L2Q567V2 206 aa7.73□□□□□ -1.17
CKAP4-202ENST00000552828 LINC00469Q8N7U9 141 aa7.73□□□□□ -1.17
CKAP4-202ENST00000552828 CIRBP-AS1Q8TBR5 109 aa7.73□□□□□ -1.17
CKAP4-202ENST00000552828 VCYO14598 125 aa7.72□□□□□ -1.17
CKAP4-202ENST00000552828 UBE2L6O14933 153 aa7.72□□□□□ -1.17
CKAP4-202ENST00000552828 PPBPP02775 128 aa7.72□□□□□ -1.17
CKAP4-202ENST00000552828 POLR2KP53803 58 aaKnown RBP7.72□□□□□ -1.17
CKAP4-202ENST00000552828 RBX1P62877 108 aa7.72□□□□□ -1.17
CKAP4-202ENST00000552828 NRACQ8N912 160 aa7.72□□□□□ -1.17
CKAP4-202ENST00000552828 UBE2WQ96B02 151 aa7.72□□□□□ -1.17
CKAP4-202ENST00000552828 IGKV2D-24A0A075B6R9 120 aa7.71□□□□□ -1.18
CKAP4-202ENST00000552828 TRBV27A0A0K0K1C4 114 aa7.71□□□□□ -1.18
CKAP4-202ENST00000552828 ANGP03950 147 aaKnown RBP7.71□□□□□ -1.18
CKAP4-202ENST00000552828 SUMO2P61956 95 aaKnown RBP7.71□□□□□ -1.18
CKAP4-202ENST00000552828 C20orf78Q9BR46 151 aa7.71□□□□□ -1.18
CKAP4-202ENST00000552828 A0A1B0GUV1 79 aa7.7□□□□□ -1.18
CKAP4-202ENST00000552828 D6R8Y8 96 aa7.7□□□□□ -1.18
CKAP4-202ENST00000552828 CRPP02741 224 aa7.7□□□□□ -1.18
CKAP4-202ENST00000552828 C18orf32Q8TCD1 76 aa7.7□□□□□ -1.18
CKAP4-202ENST00000552828 H7C423 109 aa7.69□□□□□ -1.18
CKAP4-202ENST00000552828 TNFRSF6BO95407 300 aa7.69□□□□□ -1.18
CKAP4-202ENST00000552828 TSHBP01222 138 aa7.69□□□□□ -1.18
CKAP4-202ENST00000552828 ORMDL3Q8N138 153 aa7.69□□□□□ -1.18
CKAP4-202ENST00000552828 KIR2DL4Q99706 377 aa7.69□□□□□ -1.18
CKAP4-202ENST00000552828 MIEN1Q9BRT3 115 aa7.69□□□□□ -1.18
CKAP4-202ENST00000552828 ALKBH7Q9BT30 221 aaPredicted RBP7.69□□□□□ -1.18
CKAP4-202ENST00000552828 M0R143 59 aa7.68□□□□□ -1.18
CKAP4-202ENST00000552828 FCER1GP30273 86 aa7.68□□□□□ -1.18
CKAP4-202ENST00000552828 RPL32P62910 135 aaKnown RBP7.68□□□□□ -1.18
CKAP4-202ENST00000552828 KIAA1644Q3SXP7 199 aa7.68□□□□□ -1.18
CKAP4-202ENST00000552828 C14orf177Q52M58 125 aa7.68□□□□□ -1.18
CKAP4-202ENST00000552828 AMMECR1LQ6DCA0 310 aa7.68□□□□□ -1.18
CKAP4-202ENST00000552828 ENHOQ6UWT2 76 aa7.68□□□□□ -1.18
CKAP4-202ENST00000552828 LINC00269Q8N2A0 174 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms