RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 TCTE3Q8IZS6 198 aa7.15□□□□□ -1.26
PRPF40B-212ENST00000551111 CDC42SE2Q9NRR3 84 aa7.15□□□□□ -1.26
PRPF40B-212ENST00000551111 IGHV1-58A0A0C4DH39 117 aa7.14□□□□□ -1.27
PRPF40B-212ENST00000551111 A0A1W2PNN7 141 aa7.14□□□□□ -1.27
PRPF40B-212ENST00000551111 A8MWL6 223 aa7.14□□□□□ -1.27
PRPF40B-212ENST00000551111 ZNF25P17030 456 aaPredicted RBP7.14□□□□□ -1.27
PRPF40B-212ENST00000551111 CEBPGP53567 150 aa7.14□□□□□ -1.27
PRPF40B-212ENST00000551111 RNASE13Q5GAN3 156 aaKnown RBP7.14□□□□□ -1.27
PRPF40B-212ENST00000551111 TEX261Q6UWH6 196 aa7.14□□□□□ -1.27
PRPF40B-212ENST00000551111 ALKAL2Q6UX46 152 aa7.14□□□□□ -1.27
PRPF40B-212ENST00000551111 FAM231DQ6ZW35 169 aa7.14□□□□□ -1.27
PRPF40B-212ENST00000551111 SMIM15Q7Z3B0 74 aa7.14□□□□□ -1.27
PRPF40B-212ENST00000551111 CARD19Q96LW7 228 aa7.14□□□□□ -1.27
PRPF40B-212ENST00000551111 ST20Q9HBF5 79 aa7.14□□□□□ -1.27
PRPF40B-212ENST00000551111 RAB4AP20338 218 aa7.13□□□□□ -1.27
PRPF40B-212ENST00000551111 TAGLN2P37802 199 aaKnown RBP7.13□□□□□ -1.27
PRPF40B-212ENST00000551111 SYCNQ0VAF6 134 aa7.13□□□□□ -1.27
PRPF40B-212ENST00000551111 AMN1Q8IY45 258 aa7.13□□□□□ -1.27
PRPF40B-212ENST00000551111 ZNF664Q8N3J9 261 aa7.13□□□□□ -1.27
PRPF40B-212ENST00000551111 BTF3L4Q96K17 158 aa7.13□□□□□ -1.27
PRPF40B-212ENST00000551111 IGLV4-69A0A075B6H9 119 aa7.12□□□□□ -1.27
PRPF40B-212ENST00000551111 HIGD1CA8MV81 97 aa7.12□□□□□ -1.27
PRPF40B-212ENST00000551111 TMEM250H0YL14 139 aa7.12□□□□□ -1.27
PRPF40B-212ENST00000551111 GAGE2BQ13066 116 aa7.12□□□□□ -1.27
PRPF40B-212ENST00000551111 CD164L2Q6UWJ8 174 aa7.12□□□□□ -1.27
PRPF40B-212ENST00000551111 SPINK6Q6UWN8 80 aa7.12□□□□□ -1.27
PRPF40B-212ENST00000551111 MRPL52Q86TS9 123 aaKnown RBP7.12□□□□□ -1.27
PRPF40B-212ENST00000551111 MRAP2Q96G30 205 aa7.12□□□□□ -1.27
PRPF40B-212ENST00000551111 TMEM101Q96IK0 257 aa7.12□□□□□ -1.27
PRPF40B-212ENST00000551111 TMEM191AQ9H0A3 160 aa7.12□□□□□ -1.27
PRPF40B-212ENST00000551111 TRBV27A0A0K0K1C4 114 aa7.11□□□□□ -1.27
PRPF40B-212ENST00000551111 A0A1B0GUT8 65 aa7.11□□□□□ -1.27
PRPF40B-212ENST00000551111 ZNF561-AS1K7EIQ3 104 aa7.11□□□□□ -1.27
PRPF40B-212ENST00000551111 PTTG1IPP53801 180 aa7.11□□□□□ -1.27
PRPF40B-212ENST00000551111 SS18Q15532 418 aa7.11□□□□□ -1.27
PRPF40B-212ENST00000551111 LINC01551Q86U37 167 aa7.11□□□□□ -1.27
PRPF40B-212ENST00000551111 C7orf77A4D0Y5 90 aa7.1□□□□□ -1.27
PRPF40B-212ENST00000551111 CAMPP49913 170 aa7.1□□□□□ -1.27
PRPF40B-212ENST00000551111 CT83Q5H943 113 aa7.1□□□□□ -1.27
PRPF40B-212ENST00000551111 Q6ZRP5 223 aa7.1□□□□□ -1.27
PRPF40B-212ENST00000551111 NRACQ8N912 160 aa7.1□□□□□ -1.27
PRPF40B-212ENST00000551111 NUP35Q8NFH5 326 aa7.1□□□□□ -1.27
PRPF40B-212ENST00000551111 TSKUQ8WUA8 353 aa7.1□□□□□ -1.27
PRPF40B-212ENST00000551111 C5orf38Q86SI9 138 aa7.09□□□□□ -1.27
PRPF40B-212ENST00000551111 FAM104AQ969W3 186 aa7.09□□□□□ -1.27
PRPF40B-212ENST00000551111 OPRPNQ99935 248 aaPredicted RBP7.09□□□□□ -1.27
PRPF40B-212ENST00000551111 SMIM7Q9BQ49 75 aa7.09□□□□□ -1.27
PRPF40B-212ENST00000551111 LINC00474Q9P2X8 69 aa7.09□□□□□ -1.27
PRPF40B-212ENST00000551111 UBE2D4Q9Y2X8 147 aa7.09□□□□□ -1.27
PRPF40B-212ENST00000551111 V9GYV3 84 aa7.09□□□□□ -1.27
PRPF40B-212ENST00000551111 TRAV13-1A0A0B4J241 112 aa7.08□□□□□ -1.28
PRPF40B-212ENST00000551111 LOC107984640A0A0U1RRK4 108 aa7.08□□□□□ -1.28
PRPF40B-212ENST00000551111 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.08□□□□□ -1.28
PRPF40B-212ENST00000551111 LCE2BO14633 110 aa7.08□□□□□ -1.28
PRPF40B-212ENST00000551111 SRP19P09132 144 aaKnown RBP7.08□□□□□ -1.28
PRPF40B-212ENST00000551111 BLOC1S1P78537 153 aa7.08□□□□□ -1.28
PRPF40B-212ENST00000551111 C9orf116Q5BN46 136 aaPredicted RBP7.08□□□□□ -1.28
PRPF40B-212ENST00000551111 REG3GQ6UW15 175 aa7.08□□□□□ -1.28
PRPF40B-212ENST00000551111 Q6ZUT4 128 aa7.08□□□□□ -1.28
PRPF40B-212ENST00000551111 OSTCQ9NRP0 149 aa7.08□□□□□ -1.28
PRPF40B-212ENST00000551111 PSORS1C2Q9UIG4 136 aa7.08□□□□□ -1.28
PRPF40B-212ENST00000551111 ZNF727A8MUV8 499 aa7.07□□□□□ -1.28
PRPF40B-212ENST00000551111 COX7A2LO14548 114 aa7.07□□□□□ -1.28
PRPF40B-212ENST00000551111 VCYO14598 125 aa7.07□□□□□ -1.28
PRPF40B-212ENST00000551111 MRPL51Q4U2R6 128 aaKnown RBP7.07□□□□□ -1.28
PRPF40B-212ENST00000551111 PHF5AQ7RTV0 110 aaKnown RBP7.07□□□□□ -1.28
PRPF40B-212ENST00000551111 KRTAP11-1Q8IUC1 163 aa7.07□□□□□ -1.28
PRPF40B-212ENST00000551111 BORCS7Q96B45 105 aa7.07□□□□□ -1.28
PRPF40B-212ENST00000551111 CAMK2N2Q96S95 79 aa7.07□□□□□ -1.28
PRPF40B-212ENST00000551111 C1orf196B1AJZ1 125 aa7.06□□□□□ -1.28
PRPF40B-212ENST00000551111 MALP21145 153 aa7.06□□□□□ -1.28
PRPF40B-212ENST00000551111 SUMO2P61956 95 aaKnown RBP7.06□□□□□ -1.28
PRPF40B-212ENST00000551111 RPL39P62891 51 aaKnown RBP7.06□□□□□ -1.28
PRPF40B-212ENST00000551111 EIF5A2Q9GZV4 153 aaKnown RBP7.06□□□□□ -1.28
PRPF40B-212ENST00000551111 hCG_2014768A0A024R1R8 64 aa7.05□□□□□ -1.28
PRPF40B-212ENST00000551111 FAM168BA1KXE4 195 aa7.05□□□□□ -1.28
PRPF40B-212ENST00000551111 C9JQL5 133 aa7.05□□□□□ -1.28
PRPF40B-212ENST00000551111 APOMO95445 188 aa7.05□□□□□ -1.28
PRPF40B-212ENST00000551111 FCER1GP30273 86 aa7.05□□□□□ -1.28
PRPF40B-212ENST00000551111 C10orf25Q5T742 122 aa7.05□□□□□ -1.28
PRPF40B-212ENST00000551111 FAM210AQ96ND0 272 aa7.05□□□□□ -1.28
PRPF40B-212ENST00000551111 CSDC2Q9Y534 153 aaKnown RBP7.05□□□□□ -1.28
PRPF40B-212ENST00000551111 RPL18AQ02543 176 aaKnown RBP7.04□□□□□ -1.28
PRPF40B-212ENST00000551111 RIGQ13278 110 aa7.04□□□□□ -1.28
PRPF40B-212ENST00000551111 FAM104BQ5XKR9 115 aa7.04□□□□□ -1.28
PRPF40B-212ENST00000551111 ISOC2Q96AB3 205 aa7.04□□□□□ -1.28
PRPF40B-212ENST00000551111 RPL23P62829 140 aaKnown RBP7.03□□□□□ -1.28
PRPF40B-212ENST00000551111 SPAG11BQ08648 103 aa7.03□□□□□ -1.28
PRPF40B-212ENST00000551111 C1orf137Q5JT78 98 aa7.03□□□□□ -1.28
PRPF40B-212ENST00000551111 AKAP14Q86UN6 197 aa7.03□□□□□ -1.28
PRPF40B-212ENST00000551111 KRTAP7-1Q8IUC3 87 aa7.03□□□□□ -1.28
PRPF40B-212ENST00000551111 C2orf48Q96LS8 159 aa7.03□□□□□ -1.28
PRPF40B-212ENST00000551111 IGHV3OR16-9A0A0B4J2B5 98 aa7.02□□□□□ -1.29
PRPF40B-212ENST00000551111 MT-ND6P03923 174 aa7.02□□□□□ -1.29
PRPF40B-212ENST00000551111 PRR26Q8N8Z3 221 aa7.02□□□□□ -1.29
PRPF40B-212ENST00000551111 KIR2DL4Q99706 377 aa7.02□□□□□ -1.29
PRPF40B-212ENST00000551111 TIMM21Q9BVV7 248 aa7.02□□□□□ -1.29
PRPF40B-212ENST00000551111 PKIGQ9Y2B9 76 aa7.02□□□□□ -1.29
PRPF40B-212ENST00000551111 SRSF3P84103 164 aaKnown RBP7.01□□□□□ -1.29
PRPF40B-212ENST00000551111 FAM74A3Q4VXF1 159 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms