RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 MRPS16Q9Y3D3 137 aaKnown RBP3.93□□□□□ -1.78
SCAF11-213ENST00000550629 NACAE9PAV3 2078 aa3.93□□□□□ -1.78
SCAF11-213ENST00000550629 TRBV6-8A0A0A6YYG3 113 aa3.92□□□□□ -1.78
SCAF11-213ENST00000550629 TRAV8-6A0A0B4J262 113 aa3.92□□□□□ -1.78
SCAF11-213ENST00000550629 SMKR1H3BMG3 65 aa3.92□□□□□ -1.78
SCAF11-213ENST00000550629 SCO1O75880 301 aa3.92□□□□□ -1.78
SCAF11-213ENST00000550629 NPYP01303 97 aa3.92□□□□□ -1.78
SCAF11-213ENST00000550629 COTL1Q14019 142 aa3.92□□□□□ -1.78
SCAF11-213ENST00000550629 IQCJQ1A5X6 159 aa3.92□□□□□ -1.78
SCAF11-213ENST00000550629 ESRGQ1W209 222 aa3.92□□□□□ -1.78
SCAF11-213ENST00000550629 LELP1Q5T871 98 aa3.92□□□□□ -1.78
SCAF11-213ENST00000550629 KIR2DL4Q99706 377 aa3.92□□□□□ -1.78
SCAF11-213ENST00000550629 SMIM2Q9BVW6 85 aa3.92□□□□□ -1.78
SCAF11-213ENST00000550629 MAP1LC3AQ9H492 121 aa3.92□□□□□ -1.78
SCAF11-213ENST00000550629 NXT2Q9NPJ8 142 aaKnown RBP3.92□□□□□ -1.78
SCAF11-213ENST00000550629 CSMD3Q7Z407 3707 aa3.92□□□□□ -1.78
SCAF11-213ENST00000550629 TRBV25-1A0A075B6N4 114 aa3.91□□□□□ -1.78
SCAF11-213ENST00000550629 IGHV1-24A0A0C4DH33 117 aa3.91□□□□□ -1.78
SCAF11-213ENST00000550629 LINC01546A6NGU7 62 aa3.91□□□□□ -1.78
SCAF11-213ENST00000550629 USP17L23D6RBM5 183 aa3.91□□□□□ -1.78
SCAF11-213ENST00000550629 H7C423 109 aa3.91□□□□□ -1.78
SCAF11-213ENST00000550629 TSHBP01222 138 aa3.91□□□□□ -1.78
SCAF11-213ENST00000550629 G0S2P27469 103 aa3.91□□□□□ -1.78
SCAF11-213ENST00000550629 FCER1GP30273 86 aa3.91□□□□□ -1.78
SCAF11-213ENST00000550629 LINC01547P58512 204 aaPredicted RBP3.91□□□□□ -1.78
SCAF11-213ENST00000550629 NFE4Q86UQ8 179 aa3.91□□□□□ -1.78
SCAF11-213ENST00000550629 Q8N8P6 123 aa3.91□□□□□ -1.78
SCAF11-213ENST00000550629 CHCHD7Q9BUK0 85 aa3.91□□□□□ -1.78
SCAF11-213ENST00000550629 LINC00588Q9Y4M8 146 aa3.91□□□□□ -1.78
SCAF11-213ENST00000550629 DNAH7Q8WXX0 4024 aa3.91□□□□□ -1.78
SCAF11-213ENST00000550629 IGLV2-18A0A075B6J9 118 aa3.9□□□□□ -1.79
SCAF11-213ENST00000550629 LINC01549A6NIU2 74 aa3.9□□□□□ -1.79
SCAF11-213ENST00000550629 TRGC2P03986 189 aa3.9□□□□□ -1.79
SCAF11-213ENST00000550629 DNAH10OSP0CZ25 163 aa3.9□□□□□ -1.79
SCAF11-213ENST00000550629 RAB5BP61020 215 aa3.9□□□□□ -1.79
SCAF11-213ENST00000550629 SMAGPQ0VAQ4 97 aa3.9□□□□□ -1.79
SCAF11-213ENST00000550629 KIAA1644Q3SXP7 199 aa3.9□□□□□ -1.79
SCAF11-213ENST00000550629 ORMDL2Q53FV1 153 aa3.9□□□□□ -1.79
SCAF11-213ENST00000550629 NTM-AS1Q6ZSK4 140 aa3.9□□□□□ -1.79
SCAF11-213ENST00000550629 UBE2DNLQ8IWF7 75 aa3.9□□□□□ -1.79
SCAF11-213ENST00000550629 TMEM243Q9BU79 118 aa3.9□□□□□ -1.79
SCAF11-213ENST00000550629 TRAV9-2A0A087WT02 112 aa3.89□□□□□ -1.79
SCAF11-213ENST00000550629 IGHV3-38A0A0C4DH36 116 aa3.89□□□□□ -1.79
SCAF11-213ENST00000550629 LCE6AA0A183 80 aa3.89□□□□□ -1.79
SCAF11-213ENST00000550629 SIVA1O15304 175 aa3.89□□□□□ -1.79
SCAF11-213ENST00000550629 ESDP10768 282 aa3.89□□□□□ -1.79
SCAF11-213ENST00000550629 ZNF25P17030 456 aaPredicted RBP3.89□□□□□ -1.79
SCAF11-213ENST00000550629 Q0VG73 95 aa3.89□□□□□ -1.79
SCAF11-213ENST00000550629 LAGE3Q14657 143 aa3.89□□□□□ -1.79
SCAF11-213ENST00000550629 TTC32Q5I0X7 151 aa3.89□□□□□ -1.79
SCAF11-213ENST00000550629 LINC01556Q5JQF7 62 aa3.89□□□□□ -1.79
SCAF11-213ENST00000550629 MRPL52Q86TS9 123 aaKnown RBP3.89□□□□□ -1.79
SCAF11-213ENST00000550629 NIT1Q86X76 327 aa3.89□□□□□ -1.79
SCAF11-213ENST00000550629 C18orf32Q8TCD1 76 aa3.89□□□□□ -1.79
SCAF11-213ENST00000550629 CHCHD1Q96BP2 118 aaKnown RBP3.89□□□□□ -1.79
SCAF11-213ENST00000550629 CHCHD5Q9BSY4 110 aa3.89□□□□□ -1.79
SCAF11-213ENST00000550629 TIMM21Q9BVV7 248 aa3.89□□□□□ -1.79
SCAF11-213ENST00000550629 Q9H8V8 135 aa3.89□□□□□ -1.79
SCAF11-213ENST00000550629 A0A087WX48 190 aa3.88□□□□□ -1.79
SCAF11-213ENST00000550629 LOC389332A0A1B0GUA5 103 aa3.88□□□□□ -1.79
SCAF11-213ENST00000550629 C1orf196B1AJZ1 125 aa3.88□□□□□ -1.79
SCAF11-213ENST00000550629 UBE2L6O14933 153 aa3.88□□□□□ -1.79
SCAF11-213ENST00000550629 LINC00614P0C842 121 aa3.88□□□□□ -1.79
SCAF11-213ENST00000550629 IFI27P40305 119 aaPredicted RBP3.88□□□□□ -1.79
SCAF11-213ENST00000550629 FA2HQ7L5A8 372 aa3.88□□□□□ -1.79
SCAF11-213ENST00000550629 WFDC10BQ8IUB3 73 aa3.88□□□□□ -1.79
SCAF11-213ENST00000550629 C10orf126Q8N4M7 172 aa3.88□□□□□ -1.79
SCAF11-213ENST00000550629 C20orf203Q8NBC4 194 aa3.88□□□□□ -1.79
SCAF11-213ENST00000550629 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
SCAF11-213ENST00000550629 SPANXA1Q9NS26 97 aa3.88□□□□□ -1.79
SCAF11-213ENST00000550629 CSDC2Q9Y534 153 aaKnown RBP3.88□□□□□ -1.79
SCAF11-213ENST00000550629 STARD9Q9P2P6 4700 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 HIST1H2BKO60814 126 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 LY6G6CO95867 125 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 HIST1H2BJP06899 126 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 FGF6P10767 208 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 HIST1H2BOP23527 126 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 HIST1H2BBP33778 126 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 HIST1H2BDP58876 126 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 HIST1H2BCP62807 126 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 RBX1P62877 108 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 HIST2H2BEQ16778 126 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.87□□□□□ -1.79
SCAF11-213ENST00000550629 AMMECR1LQ6DCA0 310 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 BAGE3Q86Y29 109 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 HIST1H2BHQ93079 126 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 TMEM101Q96IK0 257 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 HIST1H2BNQ99877 126 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 HIST1H2BMQ99879 126 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 CYSLTR1Q9Y271 337 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 PYGO1Q9Y3Y4 419 aa3.87□□□□□ -1.79
SCAF11-213ENST00000550629 NBDYA0A0U1RRE5 68 aa3.86□□□□□ -1.79
SCAF11-213ENST00000550629 TMEM262E9PQX1 116 aa3.86□□□□□ -1.79
SCAF11-213ENST00000550629 PRSS1P07477 247 aa3.86□□□□□ -1.79
SCAF11-213ENST00000550629 MRPS36P82909 103 aaKnown RBP3.86□□□□□ -1.79
SCAF11-213ENST00000550629 GAGE6Q13070 117 aa3.86□□□□□ -1.79
SCAF11-213ENST00000550629 COA6Q5JTJ3 125 aaKnown RBP3.86□□□□□ -1.79
SCAF11-213ENST00000550629 RNASEKQ6P5S7 137 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms