RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 LINC01545Q5VT33 79 aa11.96□□□□□ -0.49
HDAC7-227ENST00000548080 C12orf57Q99622 126 aa11.96□□□□□ -0.49
HDAC7-227ENST00000548080 SPANXA1Q9NS26 97 aa11.96□□□□□ -0.49
HDAC7-227ENST00000548080 DNAH6Q9C0G6 4158 aa11.96□□□□□ -0.5
HDAC7-227ENST00000548080 BAALCQ8WXS3 180 aa11.95□□□□□ -0.5
HDAC7-227ENST00000548080 TIMM21Q9BVV7 248 aa11.95□□□□□ -0.5
HDAC7-227ENST00000548080 LINC00588Q9Y4M8 146 aa11.95□□□□□ -0.5
HDAC7-227ENST00000548080 TRAV12-1A0A0B4J245 112 aa11.95□□□□□ -0.5
HDAC7-227ENST00000548080 H7C423 109 aa11.95□□□□□ -0.5
HDAC7-227ENST00000548080 NPSP0C0P6 89 aa11.95□□□□□ -0.5
HDAC7-227ENST00000548080 CDPF1Q6NVV7 123 aa11.95□□□□□ -0.5
HDAC7-227ENST00000548080 UBE2D4Q9Y2X8 147 aa11.95□□□□□ -0.5
HDAC7-227ENST00000548080 SMAGPQ0VAQ4 97 aa11.94□□□□□ -0.5
HDAC7-227ENST00000548080 ESRGQ1W209 222 aa11.94□□□□□ -0.5
HDAC7-227ENST00000548080 OPRPNQ99935 248 aaPredicted RBP11.94□□□□□ -0.5
HDAC7-227ENST00000548080 IGLV4-3A0A075B6K6 122 aa11.93□□□□□ -0.5
HDAC7-227ENST00000548080 A0A087WX48 190 aa11.93□□□□□ -0.5
HDAC7-227ENST00000548080 M0R2N4 97 aa11.93□□□□□ -0.5
HDAC7-227ENST00000548080 UBE2L6O14933 153 aa11.93□□□□□ -0.5
HDAC7-227ENST00000548080 ODF1Q14990 250 aa11.93□□□□□ -0.5
HDAC7-227ENST00000548080 PAPPA-AS1Q5QFB9 102 aa11.93□□□□□ -0.5
HDAC7-227ENST00000548080 FGF6P10767 208 aa11.92□□□□□ -0.5
HDAC7-227ENST00000548080 CCL18P55774 89 aa11.92□□□□□ -0.5
HDAC7-227ENST00000548080 PMVKQ15126 192 aa11.92□□□□□ -0.5
HDAC7-227ENST00000548080 DGAT2L7PQ6IED9 249 aa11.92□□□□□ -0.5
HDAC7-227ENST00000548080 TEX43Q6ZNM6 134 aa11.92□□□□□ -0.5
HDAC7-227ENST00000548080 MRPL52Q86TS9 123 aaKnown RBP11.92□□□□□ -0.5
HDAC7-227ENST00000548080 PMCHL2Q9BQD1 86 aa11.92□□□□□ -0.5
HDAC7-227ENST00000548080 CHCHD5Q9BSY4 110 aa11.92□□□□□ -0.5
HDAC7-227ENST00000548080 PRSS29PA6NIE9 313 aa11.91□□□□□ -0.5
HDAC7-227ENST00000548080 CSDC2Q9Y534 153 aaKnown RBP11.91□□□□□ -0.5
HDAC7-227ENST00000548080 S100A12P80511 92 aa11.9□□□□□ -0.5
HDAC7-227ENST00000548080 MRPS36P82909 103 aaKnown RBP11.9□□□□□ -0.5
HDAC7-227ENST00000548080 GAGE6Q13070 117 aa11.9□□□□□ -0.5
HDAC7-227ENST00000548080 AMMECR1LQ6DCA0 310 aa11.9□□□□□ -0.5
HDAC7-227ENST00000548080 ATOH7Q8N100 152 aa11.9□□□□□ -0.5
HDAC7-227ENST00000548080 FAM104AQ969W3 186 aa11.9□□□□□ -0.5
HDAC7-227ENST00000548080 VCX2Q9H322 139 aa11.9□□□□□ -0.5
HDAC7-227ENST00000548080 CST9LQ9H4G1 147 aa11.9□□□□□ -0.5
HDAC7-227ENST00000548080 TIRAPP58753 221 aa11.89□□□□□ -0.51
HDAC7-227ENST00000548080 ZC2HC1BQ5TFG8 222 aa11.89□□□□□ -0.51
HDAC7-227ENST00000548080 CHTOPQ9Y3Y2 248 aaKnown RBP11.89□□□□□ -0.51
HDAC7-227ENST00000548080 LELP1Q5T871 98 aa11.89□□□□□ -0.51
HDAC7-227ENST00000548080 LYPD5Q6UWN5 251 aa11.89□□□□□ -0.51
HDAC7-227ENST00000548080 OR5A1Q8NGJ0 315 aa11.89□□□□□ -0.51
HDAC7-227ENST00000548080 TMEM101Q96IK0 257 aa11.89□□□□□ -0.51
HDAC7-227ENST00000548080 AMELXQ99217 191 aa11.89□□□□□ -0.51
HDAC7-227ENST00000548080 MRPL35Q9NZE8 188 aaKnown RBP11.89□□□□□ -0.51
HDAC7-227ENST00000548080 F8VRH5 84 aa11.88□□□□□ -0.51
HDAC7-227ENST00000548080 DPM2O94777 84 aa11.88□□□□□ -0.51
HDAC7-227ENST00000548080 ZNF25P17030 456 aaPredicted RBP11.88□□□□□ -0.51
HDAC7-227ENST00000548080 Q6ZUT4 128 aa11.88□□□□□ -0.51
HDAC7-227ENST00000548080 TRAV9-2A0A087WT02 112 aa11.86□□□□□ -0.51
HDAC7-227ENST00000548080 IGKCP01834 107 aa11.86□□□□□ -0.51
HDAC7-227ENST00000548080 RNASE13Q5GAN3 156 aaKnown RBP11.86□□□□□ -0.51
HDAC7-227ENST00000548080 ZNF664Q8N3J9 261 aa11.86□□□□□ -0.51
HDAC7-227ENST00000548080 VAMP8Q9BV40 100 aa11.86□□□□□ -0.51
HDAC7-227ENST00000548080 CDC42SE2Q9NRR3 84 aa11.86□□□□□ -0.51
HDAC7-227ENST00000548080 MRPS16Q9Y3D3 137 aaKnown RBP11.86□□□□□ -0.51
HDAC7-227ENST00000548080 TMEM262E9PQX1 116 aa11.85□□□□□ -0.51
HDAC7-227ENST00000548080 PLNP26678 52 aa11.85□□□□□ -0.51
HDAC7-227ENST00000548080 C2orf88Q9BSF0 95 aa11.84□□□□□ -0.51
HDAC7-227ENST00000548080 A0A1B0GUV1 79 aa11.83□□□□□ -0.52
HDAC7-227ENST00000548080 PKIAP61925 76 aa11.83□□□□□ -0.52
HDAC7-227ENST00000548080 MAJINQ3KP22 176 aa11.83□□□□□ -0.52
HDAC7-227ENST00000548080 Q9H8V8 135 aa11.83□□□□□ -0.52
HDAC7-227ENST00000548080 IGLV4-69A0A075B6H9 119 aa11.83□□□□□ -0.52
HDAC7-227ENST00000548080 TRAV8-6A0A0B4J262 113 aa11.83□□□□□ -0.52
HDAC7-227ENST00000548080 HSBP1L1C9JCN9 74 aa11.83□□□□□ -0.52
HDAC7-227ENST00000548080 RBX1P62877 108 aa11.83□□□□□ -0.52
HDAC7-227ENST00000548080 PAM16Q9Y3D7 125 aa11.83□□□□□ -0.52
HDAC7-227ENST00000548080 IGLV4-60A0A075B6I1 120 aa11.82□□□□□ -0.52
HDAC7-227ENST00000548080 hDV102S1A0JD36 115 aa11.82□□□□□ -0.52
HDAC7-227ENST00000548080 UPK3BQ9BT76 320 aa11.82□□□□□ -0.52
HDAC7-227ENST00000548080 SPATA45Q537H7 98 aa11.81□□□□□ -0.52
HDAC7-227ENST00000548080 MPV17L2Q567V2 206 aa11.81□□□□□ -0.52
HDAC7-227ENST00000548080 Q6ZR54 194 aa11.81□□□□□ -0.52
HDAC7-227ENST00000548080 WFDC10BQ8IUB3 73 aa11.81□□□□□ -0.52
HDAC7-227ENST00000548080 KRTAP1-5Q9BYS1 174 aa11.81□□□□□ -0.52
HDAC7-227ENST00000548080 DNAH10Q8IVF4 4471 aa11.81□□□□□ -0.52
HDAC7-227ENST00000548080 FRAS1Q86XX4 4008 aa11.8□□□□□ -0.52
HDAC7-227ENST00000548080 A0A0J9YXV3 536 aa11.8□□□□□ -0.52
HDAC7-227ENST00000548080 NBDYA0A0U1RRE5 68 aa11.8□□□□□ -0.52
HDAC7-227ENST00000548080 C11orf86A6NJI1 115 aa11.8□□□□□ -0.52
HDAC7-227ENST00000548080 IGLC3P0DOY3 106 aa11.8□□□□□ -0.52
HDAC7-227ENST00000548080 NFE4Q86UQ8 179 aa11.8□□□□□ -0.52
HDAC7-227ENST00000548080 UBE2D1P51668 147 aa11.79□□□□□ -0.52
HDAC7-227ENST00000548080 STPG4Q8N801 248 aa11.79□□□□□ -0.52
HDAC7-227ENST00000548080 SIVA1O15304 175 aa11.78□□□□□ -0.52
HDAC7-227ENST00000548080 CHAC1Q9BUX1 264 aa11.78□□□□□ -0.52
HDAC7-227ENST00000548080 DNAH2Q9P225 4427 aa11.78□□□□□ -0.52
HDAC7-227ENST00000548080 TINCRA0A1B0GVN0 87 aa11.77□□□□□ -0.52
HDAC7-227ENST00000548080 TRAV13-1A0A0B4J241 112 aa11.76□□□□□ -0.53
HDAC7-227ENST00000548080 FAM19A3Q7Z5A8 133 aa11.76□□□□□ -0.53
HDAC7-227ENST00000548080 PRO1933Q9H354 126 aa11.76□□□□□ -0.53
HDAC7-227ENST00000548080 SEC11AP67812 179 aa11.76□□□□□ -0.53
HDAC7-227ENST00000548080 ANKRD39Q53RE8 183 aa11.76□□□□□ -0.53
HDAC7-227ENST00000548080 RTL8CO15255 209 aa11.75□□□□□ -0.53
HDAC7-227ENST00000548080 ZNF22P17026 224 aaPredicted RBP11.75□□□□□ -0.53
HDAC7-227ENST00000548080 TMEM170BQ5T4T1 132 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms