RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 H3BUT2 72 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 J3QQQ9 107 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 M0R2P5 195 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 SRP19P09132 144 aaKnown RBP2.37□□□□□ -2.03
SNHG1-217ENST00000541578 CRYGAP11844 174 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 DAPP51397 102 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 FGF12P61328 243 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 RPL38P63173 70 aaKnown RBP2.37□□□□□ -2.03
SNHG1-217ENST00000541578 SSBP1Q04837 148 aaKnown RBP2.37□□□□□ -2.03
SNHG1-217ENST00000541578 SPRNQ5BIV9 151 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 FAM201AQ5SY85 155 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 TMEM14EPQ6UXP3 125 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 EXOC3-AS1Q8N2X6 119 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 PPDPFLQ8WWR9 84 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 AQP3Q92482 292 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 IGF2BP2-AS1Q96M15 143 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 OR8B2Q96RD0 313 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 CCL13Q99616 98 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 NMES1Q9C002 83 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 C16orf95Q9H693 158 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 NAA60Q9H7X0 242 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 BCL2L10Q9HD36 194 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 TVP23BQ9NYZ1 205 aa2.37□□□□□ -2.03
SNHG1-217ENST00000541578 KMT2CQ8NEZ4 4911 aaKnown RBP2.37□□□□□ -2.03
SNHG1-217ENST00000541578 IGKV1D-37A0A075B6S9 117 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 IGHV1-18A0A0C4DH31 117 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 SYS1-DBNDD2H3BUS1 97 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 ZNF737O75373 536 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 APOMO95445 188 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 S100A3P33764 101 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 KRTDAPP60985 99 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 SNRPGP62308 76 aaKnown RBP2.36□□□□□ -2.03
SNHG1-217ENST00000541578 C12orf74Q32Q52 190 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 VMA21Q3ZAQ7 101 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 Q56UQ5 140 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 AAED1Q7RTV5 226 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 LY6G5BQ8NDX9 201 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 OR2T10Q8NGZ9 312 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 OR10AC1Q8NH08 325 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 MRPL30Q8TCC3 161 aaKnown RBP2.36□□□□□ -2.03
SNHG1-217ENST00000541578 PPP1R1CQ8WVI7 109 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 COPS9Q8WXC6 57 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 DPH3Q96FX2 82 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 PRELID3AQ96N28 172 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 C20orf78Q9BR46 151 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 IMUPQ9GZP8 106 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 CST11Q9H112 138 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 MANBALQ9NQG1 85 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 TAAR3PQ9P1P4 343 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 R4GN34 69 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 RYR3Q15413 4870 aa2.36□□□□□ -2.03
SNHG1-217ENST00000541578 TRBV20-1A0A075B6N2 111 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 IGKV1D-17A0A075B6S4 117 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 IGHV3-15A0A0B4J1V0 119 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 FAM236AA0A1B0GUQ0 79 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 FAM236BA0A1B0GV22 79 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 LOC107986453A0A1B0GWG9 222 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 LYNX1G3V0Z9 82 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 PGLYRP1O75594 196 aaPredicted RBP2.35□□□□□ -2.03
SNHG1-217ENST00000541578 IGKV1-17P01599 117 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 IGLV6-57P01721 117 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 TRACP01848 142 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 SMIM13P0DJ93 91 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 IGHV3-30-3P0DP02 117 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 LYNX1P0DP58 116 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 FGF6P10767 208 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 NPPCP23582 126 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 FOXA3P55318 350 aaPredicted RBP2.35□□□□□ -2.03
SNHG1-217ENST00000541578 TSPEAR-AS2P59090 65 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 KRTAP25-1Q3LHN0 102 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 ETDBQ3ZM63 59 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 TMEM155Q4W5P6 130 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 PSMG4Q5JS54 123 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 SDIM1Q6ZPB5 146 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 LHFPL1Q86WI0 220 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 BPIFA4PQ86YQ2 179 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 ANKRD29Q8N6D5 301 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 DAND5Q8N907 189 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 ZNF563Q8TA94 476 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 AMELYQ99218 206 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 TMEM147Q9BVK8 224 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 RTL8AQ9BWD3 113 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 ANAPC10Q9UM13 185 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 TANC2Q9HCD6 1990 aa2.35□□□□□ -2.03
SNHG1-217ENST00000541578 TRBV19A0A075B6N1 114 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 TRAV27A0A087WT01 109 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 IGHV3-73A0A0B4J1V6 119 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 TRAV1-1A0A0B4J248 108 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 A0A1B0GW54 56 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 COX7A2LO14548 114 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 CPSF4O95639 269 aaKnown RBP2.34□□□□□ -2.03
SNHG1-217ENST00000541578 IGHV3-7P01780 117 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 C3orf79P0CE67 100 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 PYYP10082 97 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 HLA-DMBP28068 263 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 RPL27AP46776 148 aaKnown RBP2.34□□□□□ -2.03
SNHG1-217ENST00000541578 SMIM11AP58511 58 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 CCL8P80075 99 aa2.34□□□□□ -2.03
SNHG1-217ENST00000541578 WFDC2Q14508 124 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms