RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 J3QQQ9 107 aa14.42□□□□□ -0.1
PACSIN3-211ENST00000539589 MRPS36P82909 103 aaKnown RBP14.42□□□□□ -0.1
PACSIN3-211ENST00000539589 NHP2Q9NX24 153 aaKnown RBP14.42□□□□□ -0.1
PACSIN3-211ENST00000539589 LGALS3P17931 250 aaKnown RBP14.41□□□□□ -0.1
PACSIN3-211ENST00000539589 PLEKHB2Q96CS7 222 aa14.41□□□□□ -0.1
PACSIN3-211ENST00000539589 LEPROTO15243 131 aa14.41□□□□□ -0.1
PACSIN3-211ENST00000539589 TSPEAR-AS2P59090 65 aa14.41□□□□□ -0.1
PACSIN3-211ENST00000539589 RNASE13Q5GAN3 156 aaKnown RBP14.39□□□□□ -0.11
PACSIN3-211ENST00000539589 TIMM21Q9BVV7 248 aa14.39□□□□□ -0.11
PACSIN3-211ENST00000539589 UBE2D3P61077 147 aa14.39□□□□□ -0.11
PACSIN3-211ENST00000539589 UBE2D2P62837 147 aa14.39□□□□□ -0.11
PACSIN3-211ENST00000539589 K7ERJ3 54 aa14.38□□□□□ -0.11
PACSIN3-211ENST00000539589 EGFEM1PQ0D2K5 195 aa14.38□□□□□ -0.11
PACSIN3-211ENST00000539589 SRSF9Q13242 221 aaKnown RBP eCLIP14.38□□□□□ -0.11
PACSIN3-211ENST00000539589 DGAT2L7PQ6IED9 249 aa14.38□□□□□ -0.11
PACSIN3-211ENST00000539589 Q6ZUT4 128 aa14.38□□□□□ -0.11
PACSIN3-211ENST00000539589 TINCRA0A1B0GVN0 87 aa14.37□□□□□ -0.11
PACSIN3-211ENST00000539589 GAGE12JA6NER3 117 aa14.37□□□□□ -0.11
PACSIN3-211ENST00000539589 GAGE10A6NGK3 116 aa14.37□□□□□ -0.11
PACSIN3-211ENST00000539589 GAGE4Q13068 117 aa14.37□□□□□ -0.11
PACSIN3-211ENST00000539589 GAGE5Q13069 117 aa14.37□□□□□ -0.11
PACSIN3-211ENST00000539589 GAGE13Q4V321 117 aa14.37□□□□□ -0.11
PACSIN3-211ENST00000539589 MDFIQ99750 246 aa14.37□□□□□ -0.11
PACSIN3-211ENST00000539589 NAA38Q9BRA0 125 aaKnown RBP14.37□□□□□ -0.11
PACSIN3-211ENST00000539589 A0A0J9YY99 117 aa14.37□□□□□ -0.11
PACSIN3-211ENST00000539589 TRBV6-4A0A1B0GX49 114 aa14.37□□□□□ -0.11
PACSIN3-211ENST00000539589 GTF2H5Q6ZYL4 71 aa14.37□□□□□ -0.11
PACSIN3-211ENST00000539589 IGHV4-30-4P0DP06 118 aa14.36□□□□□ -0.11
PACSIN3-211ENST00000539589 C12orf74Q32Q52 190 aa14.36□□□□□ -0.11
PACSIN3-211ENST00000539589 TRGV4A0A0C4DH28 118 aa14.36□□□□□ -0.11
PACSIN3-211ENST00000539589 A0A1W2PPM0 123 aa14.36□□□□□ -0.11
PACSIN3-211ENST00000539589 SAMD5Q5TGI4 173 aa14.36□□□□□ -0.11
PACSIN3-211ENST00000539589 G3V4G9 280 aa14.35□□□□□ -0.11
PACSIN3-211ENST00000539589 KIR2DL5BQ8NHK3 375 aa14.35□□□□□ -0.11
PACSIN3-211ENST00000539589 X6R8D5 127 aa14.35□□□□□ -0.11
PACSIN3-211ENST00000539589 IGHV3-64A0A075B6Q5 118 aa14.34□□□□□ -0.11
PACSIN3-211ENST00000539589 SPANXB1Q9NS25 103 aaPredicted RBP14.34□□□□□ -0.11
PACSIN3-211ENST00000539589 NOTCH1P46531 2555 aa14.34□□□□□ -0.11
PACSIN3-211ENST00000539589 TMEM238LA0A1B0GVL6 79 aa14.34□□□□□ -0.11
PACSIN3-211ENST00000539589 A6NJY4 79 aa14.34□□□□□ -0.11
PACSIN3-211ENST00000539589 FABP2P12104 132 aa14.34□□□□□ -0.11
PACSIN3-211ENST00000539589 SMAGPQ0VAQ4 97 aa14.34□□□□□ -0.11
PACSIN3-211ENST00000539589 NTM-AS1Q6ZSK4 140 aa14.34□□□□□ -0.11
PACSIN3-211ENST00000539589 OR5A1Q8NGJ0 315 aa14.34□□□□□ -0.11
PACSIN3-211ENST00000539589 A0A1B0GWB2 263 aa14.33□□□□□ -0.12
PACSIN3-211ENST00000539589 GTSF1LQ9H1H1 148 aa14.33□□□□□ -0.12
PACSIN3-211ENST00000539589 UBE2D1P51668 147 aa14.32□□□□□ -0.12
PACSIN3-211ENST00000539589 GEMIN7Q9H840 131 aaKnown RBP14.32□□□□□ -0.12
PACSIN3-211ENST00000539589 CSDC2Q9Y534 153 aaKnown RBP14.32□□□□□ -0.12
PACSIN3-211ENST00000539589 SMIM9A6NGZ8 99 aa14.32□□□□□ -0.12
PACSIN3-211ENST00000539589 K7EP34 96 aa14.32□□□□□ -0.12
PACSIN3-211ENST00000539589 APOC4P55056 127 aa14.32□□□□□ -0.12
PACSIN3-211ENST00000539589 DEFB135Q30KP9 77 aa14.32□□□□□ -0.12
PACSIN3-211ENST00000539589 IGHV3-30-3P0DP02 117 aa14.31□□□□□ -0.12
PACSIN3-211ENST00000539589 FHL2Q14192 279 aa14.31□□□□□ -0.12
PACSIN3-211ENST00000539589 IGHV1-58A0A0C4DH39 117 aa14.31□□□□□ -0.12
PACSIN3-211ENST00000539589 LINC00694P0DN24 101 aa14.31□□□□□ -0.12
PACSIN3-211ENST00000539589 SBSPONQ8IVN8 264 aa14.31□□□□□ -0.12
PACSIN3-211ENST00000539589 NBEAL1Q6ZS30 2694 aa14.3□□□□□ -0.12
PACSIN3-211ENST00000539589 TIRAPP58753 221 aa14.3□□□□□ -0.12
PACSIN3-211ENST00000539589 SPCS1Q9Y6A9 102 aa14.3□□□□□ -0.12
PACSIN3-211ENST00000539589 LOC100131303A0A0U1RQF7 123 aa14.29□□□□□ -0.12
PACSIN3-211ENST00000539589 IGLL5B9A064 214 aa14.29□□□□□ -0.12
PACSIN3-211ENST00000539589 TMEM243Q9BU79 118 aa14.29□□□□□ -0.12
PACSIN3-211ENST00000539589 DEFB130BP0DP73 79 aa14.29□□□□□ -0.12
PACSIN3-211ENST00000539589 DEFB130AP0DP74 79 aa14.29□□□□□ -0.12
PACSIN3-211ENST00000539589 LINC00612Q8N6U2 182 aa14.29□□□□□ -0.12
PACSIN3-211ENST00000539589 UBE2L6O14933 153 aa14.28□□□□□ -0.12
PACSIN3-211ENST00000539589 TRAV8-3A0A0A6YYJ7 113 aa14.27□□□□□ -0.12
PACSIN3-211ENST00000539589 IGHV3-30P01768 117 aa14.27□□□□□ -0.12
PACSIN3-211ENST00000539589 IGHV3-30-5P0DP03 117 aa14.27□□□□□ -0.12
PACSIN3-211ENST00000539589 VSIG2Q96IQ7 327 aa14.27□□□□□ -0.12
PACSIN3-211ENST00000539589 IGLV5-45A0A087WSX0 123 aa14.26□□□□□ -0.13
PACSIN3-211ENST00000539589 H7C423 109 aa14.26□□□□□ -0.13
PACSIN3-211ENST00000539589 SPINK8P0C7L1 97 aa14.25□□□□□ -0.13
PACSIN3-211ENST00000539589 HERVK_113P63121 156 aa14.25□□□□□ -0.13
PACSIN3-211ENST00000539589 TMEM101Q96IK0 257 aa14.25□□□□□ -0.13
PACSIN3-211ENST00000539589 C10orf126Q8N4M7 172 aa14.25□□□□□ -0.13
PACSIN3-211ENST00000539589 CDC42SE2Q9NRR3 84 aa14.25□□□□□ -0.13
PACSIN3-211ENST00000539589 CDKN2A-AS1Q9UH64 79 aa14.25□□□□□ -0.13
PACSIN3-211ENST00000539589 MGAM2Q2M2H8 2515 aa14.24□□□□□ -0.13
PACSIN3-211ENST00000539589 A8MZ25 164 aa14.24□□□□□ -0.13
PACSIN3-211ENST00000539589 TMEM238C9JI98 176 aa14.24□□□□□ -0.13
PACSIN3-211ENST00000539589 FAM19A3Q7Z5A8 133 aa14.24□□□□□ -0.13
PACSIN3-211ENST00000539589 A0A0J9YXY3 114 aa14.24□□□□□ -0.13
PACSIN3-211ENST00000539589 RNF183Q96D59 192 aa14.24□□□□□ -0.13
PACSIN3-211ENST00000539589 NDUFA12Q9UI09 145 aa14.24□□□□□ -0.13
PACSIN3-211ENST00000539589 LINC00242Q5T6M2 205 aa14.23□□□□□ -0.13
PACSIN3-211ENST00000539589 TRAV13-1A0A0B4J241 112 aa14.22□□□□□ -0.13
PACSIN3-211ENST00000539589 DEFB4AO15263 64 aa14.22□□□□□ -0.13
PACSIN3-211ENST00000539589 COX6A2Q02221 97 aa14.22□□□□□ -0.13
PACSIN3-211ENST00000539589 TRBV6-8A0A0A6YYG3 113 aa14.21□□□□□ -0.13
PACSIN3-211ENST00000539589 IGHV4-28A0A0C4DH34 117 aa14.21□□□□□ -0.13
PACSIN3-211ENST00000539589 LYRM9A8MSI8 78 aa14.21□□□□□ -0.13
PACSIN3-211ENST00000539589 APOMO95445 188 aa14.2□□□□□ -0.14
PACSIN3-211ENST00000539589 Q8NAQ8 132 aa14.2□□□□□ -0.14
PACSIN3-211ENST00000539589 PGPEP1Q9NXJ5 209 aa14.2□□□□□ -0.14
PACSIN3-211ENST00000539589 ZFAND6Q6FIF0 208 aa14.2□□□□□ -0.14
PACSIN3-211ENST00000539589 FAM222AQ5U5X8 452 aa14.19□□□□□ -0.14
PACSIN3-211ENST00000539589 PRB2P02812 416 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms