RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 LYRM7Q5U5X0 104 aa9.72□□□□□ -0.85
SMG6-203ENST00000536871 OPRPNQ99935 248 aaPredicted RBP9.72□□□□□ -0.85
SMG6-203ENST00000536871 NHP2Q9NX24 153 aaKnown RBP9.72□□□□□ -0.85
SMG6-203ENST00000536871 UBE2D3P61077 147 aa9.72□□□□□ -0.85
SMG6-203ENST00000536871 UBE2D2P62837 147 aa9.72□□□□□ -0.85
SMG6-203ENST00000536871 KIR2DL5BQ8NHK3 375 aa9.72□□□□□ -0.85
SMG6-203ENST00000536871 CDIP1Q9H305 208 aa9.72□□□□□ -0.85
SMG6-203ENST00000536871 A0A0J9YXV3 536 aa9.71□□□□□ -0.85
SMG6-203ENST00000536871 A0A0J9YY99 117 aa9.71□□□□□ -0.85
SMG6-203ENST00000536871 TIRAPP58753 221 aa9.71□□□□□ -0.85
SMG6-203ENST00000536871 C12orf74Q32Q52 190 aa9.71□□□□□ -0.85
SMG6-203ENST00000536871 ZNF469Q96JG9 3925 aaPredicted RBP9.71□□□□□ -0.86
SMG6-203ENST00000536871 TMEM262E9PQX1 116 aa9.7□□□□□ -0.86
SMG6-203ENST00000536871 Q6ZUT4 128 aa9.7□□□□□ -0.86
SMG6-203ENST00000536871 SLC25A29Q8N8R3 303 aa9.7□□□□□ -0.86
SMG6-203ENST00000536871 WFDC10AQ9H1F0 79 aa9.7□□□□□ -0.86
SMG6-203ENST00000536871 CITED1Q99966 193 aa9.7□□□□□ -0.86
SMG6-203ENST00000536871 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.69□□□□□ -0.86
SMG6-203ENST00000536871 IGKV2-29A2NJV5 120 aaPredicted RBP9.69□□□□□ -0.86
SMG6-203ENST00000536871 SH2D6Q7Z4S9 175 aa9.69□□□□□ -0.86
SMG6-203ENST00000536871 FAM19A3Q7Z5A8 133 aa9.69□□□□□ -0.86
SMG6-203ENST00000536871 FAM104AQ969W3 186 aa9.69□□□□□ -0.86
SMG6-203ENST00000536871 TRGV4A0A0C4DH28 118 aa9.68□□□□□ -0.86
SMG6-203ENST00000536871 IGHV3-38A0A0C4DH36 116 aa9.68□□□□□ -0.86
SMG6-203ENST00000536871 IGHV1-58A0A0C4DH39 117 aa9.68□□□□□ -0.86
SMG6-203ENST00000536871 M0QXV9 152 aa9.68□□□□□ -0.86
SMG6-203ENST00000536871 GAGE7O76087 117 aa9.68□□□□□ -0.86
SMG6-203ENST00000536871 GAGE12FP0CL80 117 aa9.68□□□□□ -0.86
SMG6-203ENST00000536871 GAGE12GP0CL81 117 aa9.68□□□□□ -0.86
SMG6-203ENST00000536871 GAGE12IP0CL82 117 aa9.68□□□□□ -0.86
SMG6-203ENST00000536871 UBE2D1P51668 147 aa9.68□□□□□ -0.86
SMG6-203ENST00000536871 PPDPFLQ8WWR9 84 aa9.68□□□□□ -0.86
SMG6-203ENST00000536871 Q9UF83 564 aa9.68□□□□□ -0.86
SMG6-203ENST00000536871 ANK3Q12955 4377 aaKnown RBP9.68□□□□□ -0.86
SMG6-203ENST00000536871 ACANP16112 2415 aa9.68□□□□□ -0.86
SMG6-203ENST00000536871 APOC4P55056 127 aa9.68□□□□□ -0.86
SMG6-203ENST00000536871 HERVK_113P63121 156 aa9.68□□□□□ -0.86
SMG6-203ENST00000536871 LINC00612Q8N6U2 182 aa9.68□□□□□ -0.86
SMG6-203ENST00000536871 NBPF19A0A087WUL8 3843 aa9.67□□□□□ -0.86
SMG6-203ENST00000536871 IGLV5-45A0A087WSX0 123 aa9.67□□□□□ -0.86
SMG6-203ENST00000536871 K7ERJ3 54 aa9.67□□□□□ -0.86
SMG6-203ENST00000536871 TMEM101Q96IK0 257 aa9.67□□□□□ -0.86
SMG6-203ENST00000536871 TMEM243Q9BU79 118 aa9.67□□□□□ -0.86
SMG6-203ENST00000536871 NACAE9PAV3 2078 aa9.67□□□□□ -0.86
SMG6-203ENST00000536871 UBE2L6O14933 153 aa9.66□□□□□ -0.86
SMG6-203ENST00000536871 TSPEAR-AS2P59090 65 aa9.66□□□□□ -0.86
SMG6-203ENST00000536871 SBSPONQ8IVN8 264 aa9.66□□□□□ -0.86
SMG6-203ENST00000536871 ANAPC13Q9BS18 74 aa9.66□□□□□ -0.86
SMG6-203ENST00000536871 ITPR2Q14571 2701 aa9.66□□□□□ -0.86
SMG6-203ENST00000536871 GAGE12JA6NER3 117 aa9.66□□□□□ -0.86
SMG6-203ENST00000536871 IGHV3-30-3P0DP02 117 aa9.66□□□□□ -0.86
SMG6-203ENST00000536871 GAGE4Q13068 117 aa9.66□□□□□ -0.86
SMG6-203ENST00000536871 ZFAND6Q6FIF0 208 aa9.66□□□□□ -0.86
SMG6-203ENST00000536871 CEMP1Q6PRD7 247 aaPredicted RBP9.66□□□□□ -0.86
SMG6-203ENST00000536871 VSIG2Q96IQ7 327 aa9.66□□□□□ -0.86
SMG6-203ENST00000536871 FASNP49327 2511 aaKnown RBP9.65□□□□□ -0.86
SMG6-203ENST00000536871 LYRM9A8MSI8 78 aa9.65□□□□□ -0.86
SMG6-203ENST00000536871 WIPF1O43516 503 aa9.65□□□□□ -0.86
SMG6-203ENST00000536871 Q6Q795 121 aa9.65□□□□□ -0.86
SMG6-203ENST00000536871 TEN1Q86WV5 123 aa9.65□□□□□ -0.86
SMG6-203ENST00000536871 WFDC9Q8NEX5 89 aa9.65□□□□□ -0.86
SMG6-203ENST00000536871 RNF183Q96D59 192 aa9.65□□□□□ -0.86
SMG6-203ENST00000536871 IGHV3-30P01768 117 aa9.64□□□□□ -0.87
SMG6-203ENST00000536871 IGHV3-30-5P0DP03 117 aa9.64□□□□□ -0.87
SMG6-203ENST00000536871 FHL2Q14192 279 aa9.64□□□□□ -0.87
SMG6-203ENST00000536871 TRBV20-1A0A075B6N2 111 aa9.64□□□□□ -0.87
SMG6-203ENST00000536871 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.63□□□□□ -0.87
SMG6-203ENST00000536871 MT-ATP8P03928 68 aa9.63□□□□□ -0.87
SMG6-203ENST00000536871 XGP55808 180 aa9.63□□□□□ -0.87
SMG6-203ENST00000536871 NTM-AS1Q6ZSK4 140 aa9.63□□□□□ -0.87
SMG6-203ENST00000536871 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.63□□□□□ -0.87
SMG6-203ENST00000536871 TIMM17BO60830 172 aa9.62□□□□□ -0.87
SMG6-203ENST00000536871 CDC42SE2Q9NRR3 84 aa9.62□□□□□ -0.87
SMG6-203ENST00000536871 MTORP42345 2549 aa9.62□□□□□ -0.87
SMG6-203ENST00000536871 LINC00694P0DN24 101 aa9.62□□□□□ -0.87
SMG6-203ENST00000536871 NDUFA12Q9UI09 145 aa9.62□□□□□ -0.87
SMG6-203ENST00000536871 X6R8D5 127 aa9.62□□□□□ -0.87
SMG6-203ENST00000536871 WNK1Q9H4A3 2382 aa9.61□□□□□ -0.87
SMG6-203ENST00000536871 A0A0J9YXY3 114 aa9.61□□□□□ -0.87
SMG6-203ENST00000536871 TRBV6-8A0A0A6YYG3 113 aa9.6□□□□□ -0.87
SMG6-203ENST00000536871 SMCPP49901 116 aaPredicted RBP9.6□□□□□ -0.87
SMG6-203ENST00000536871 RNASE13Q5GAN3 156 aaKnown RBP9.6□□□□□ -0.87
SMG6-203ENST00000536871 COPS9Q8WXC6 57 aa9.6□□□□□ -0.87
SMG6-203ENST00000536871 SPANXDQ9BXN6 97 aa9.6□□□□□ -0.87
SMG6-203ENST00000536871 SPANXCQ9NY87 97 aa9.6□□□□□ -0.87
SMG6-203ENST00000536871 SS18L2Q9UHA2 77 aa9.6□□□□□ -0.87
SMG6-203ENST00000536871 AKAP9Q99996 3911 aa9.6□□□□□ -0.87
SMG6-203ENST00000536871 LINC00242Q5T6M2 205 aa9.59□□□□□ -0.87
SMG6-203ENST00000536871 C10orf126Q8N4M7 172 aa9.59□□□□□ -0.87
SMG6-203ENST00000536871 PRO0255Q9UI72 69 aa9.59□□□□□ -0.87
SMG6-203ENST00000536871 IGHV3-64A0A075B6Q5 118 aa9.59□□□□□ -0.87
SMG6-203ENST00000536871 A0A0B4J2C4 111 aa9.59□□□□□ -0.87
SMG6-203ENST00000536871 IGLV5-39A0A0G2JS06 123 aa9.59□□□□□ -0.87
SMG6-203ENST00000536871 NDUFA1O15239 70 aa9.59□□□□□ -0.87
SMG6-203ENST00000536871 IFITM1P13164 125 aa9.59□□□□□ -0.87
SMG6-203ENST00000536871 CIRBPQ14011 172 aaKnown RBP9.59□□□□□ -0.87
SMG6-203ENST00000536871 LINC01600Q96MT4 127 aa9.59□□□□□ -0.87
SMG6-203ENST00000536871 CDKN2A-AS1Q9UH64 79 aa9.59□□□□□ -0.87
SMG6-203ENST00000536871 GCN1Q92616 2671 aaKnown RBP9.58□□□□□ -0.88
SMG6-203ENST00000536871 MIFP14174 115 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms