RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 PDZD11Q5EBL8 140 aa8.19□□□□□ -1.1
PRKDC-207ENST00000536483 ENHOQ6UWT2 76 aa8.19□□□□□ -1.1
PRKDC-207ENST00000536483 TRBV25-1A0A075B6N4 114 aa8.18□□□□□ -1.1
PRKDC-207ENST00000536483 A0A1B0GUV1 79 aa8.18□□□□□ -1.1
PRKDC-207ENST00000536483 TMEM262E9PQX1 116 aa8.18□□□□□ -1.1
PRKDC-207ENST00000536483 MGPP08493 103 aa8.18□□□□□ -1.1
PRKDC-207ENST00000536483 PMCHP20382 165 aa8.18□□□□□ -1.1
PRKDC-207ENST00000536483 WFDC2Q14508 124 aa8.18□□□□□ -1.1
PRKDC-207ENST00000536483 MPV17L2Q567V2 206 aa8.18□□□□□ -1.1
PRKDC-207ENST00000536483 UBE2WQ96B02 151 aa8.18□□□□□ -1.1
PRKDC-207ENST00000536483 CHCHD5Q9BSY4 110 aa8.18□□□□□ -1.1
PRKDC-207ENST00000536483 ALKBH7Q9BT30 221 aaPredicted RBP8.18□□□□□ -1.1
PRKDC-207ENST00000536483 IGHV1-24A0A0C4DH33 117 aa8.17□□□□□ -1.1
PRKDC-207ENST00000536483 RBX1P62877 108 aa8.17□□□□□ -1.1
PRKDC-207ENST00000536483 MIAQ16674 131 aa8.17□□□□□ -1.1
PRKDC-207ENST00000536483 Q8N976 141 aa8.17□□□□□ -1.1
PRKDC-207ENST00000536483 CHCHD1Q96BP2 118 aaKnown RBP8.17□□□□□ -1.1
PRKDC-207ENST00000536483 LRP1Q07954 4544 aaKnown RBP8.17□□□□□ -1.1
PRKDC-207ENST00000536483 LECT2O14960 151 aa8.16□□□□□ -1.1
PRKDC-207ENST00000536483 SERF1AO75920 110 aa8.16□□□□□ -1.1
PRKDC-207ENST00000536483 PLA2G1BP04054 148 aaKnown RBP8.16□□□□□ -1.1
PRKDC-207ENST00000536483 CAMPP49913 170 aa8.16□□□□□ -1.1
PRKDC-207ENST00000536483 SMIM15Q7Z3B0 74 aa8.16□□□□□ -1.1
PRKDC-207ENST00000536483 C18orf32Q8TCD1 76 aa8.16□□□□□ -1.1
PRKDC-207ENST00000536483 IGKV2D-24A0A075B6R9 120 aa8.15□□□□□ -1.1
PRKDC-207ENST00000536483 TRBV6-5A0A0K0K1A5 114 aa8.15□□□□□ -1.1
PRKDC-207ENST00000536483 ANGP03950 147 aaKnown RBP8.15□□□□□ -1.1
PRKDC-207ENST00000536483 KRTAP26-1Q6PEX3 210 aa8.15□□□□□ -1.1
PRKDC-207ENST00000536483 Q6ZSA8 131 aa8.15□□□□□ -1.1
PRKDC-207ENST00000536483 LINC00528Q8N1L1 170 aa8.15□□□□□ -1.1
PRKDC-207ENST00000536483 BAALCQ8WXS3 180 aa8.15□□□□□ -1.1
PRKDC-207ENST00000536483 C1orf43Q9BWL3 253 aa8.15□□□□□ -1.1
PRKDC-207ENST00000536483 TMEM191AQ9H0A3 160 aa8.15□□□□□ -1.1
PRKDC-207ENST00000536483 HMCN2Q8NDA2 5059 aa8.15□□□□□ -1.1
PRKDC-207ENST00000536483 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.14□□□□□ -1.11
PRKDC-207ENST00000536483 KRTAP29-1A8MX34 341 aaPredicted RBP8.14□□□□□ -1.11
PRKDC-207ENST00000536483 NCR2O95944 276 aa8.14□□□□□ -1.11
PRKDC-207ENST00000536483 LINC00310P59036 64 aa8.14□□□□□ -1.11
PRKDC-207ENST00000536483 KIAA1644Q3SXP7 199 aa8.14□□□□□ -1.11
PRKDC-207ENST00000536483 TMEM243Q9BU79 118 aa8.14□□□□□ -1.11
PRKDC-207ENST00000536483 TSTD3H0UI37 97 aa8.13□□□□□ -1.11
PRKDC-207ENST00000536483 NUPR1O60356 82 aa8.13□□□□□ -1.11
PRKDC-207ENST00000536483 CRPP02741 224 aa8.13□□□□□ -1.11
PRKDC-207ENST00000536483 PPBPP02775 128 aa8.13□□□□□ -1.11
PRKDC-207ENST00000536483 GAGE6Q13070 117 aa8.13□□□□□ -1.11
PRKDC-207ENST00000536483 COTL1Q14019 142 aa8.13□□□□□ -1.11
PRKDC-207ENST00000536483 LINC01620Q4KN68 170 aa8.13□□□□□ -1.11
PRKDC-207ENST00000536483 C20orf203Q8NBC4 194 aa8.13□□□□□ -1.11
PRKDC-207ENST00000536483 DEFB104AQ8WTQ1 72 aa8.13□□□□□ -1.11
PRKDC-207ENST00000536483 LAMTOR2Q9Y2Q5 125 aa8.13□□□□□ -1.11
PRKDC-207ENST00000536483 TRAV8-4A0A0B4J246 113 aa8.12□□□□□ -1.11
PRKDC-207ENST00000536483 TRAV26-2A0A0B4J265 109 aa8.12□□□□□ -1.11
PRKDC-207ENST00000536483 PCP4L1A6NKN8 68 aa8.12□□□□□ -1.11
PRKDC-207ENST00000536483 H7C423 109 aa8.12□□□□□ -1.11
PRKDC-207ENST00000536483 HSBP1O75506 76 aa8.12□□□□□ -1.11
PRKDC-207ENST00000536483 AMTP48728 403 aa8.12□□□□□ -1.11
PRKDC-207ENST00000536483 C14orf177Q52M58 125 aa8.12□□□□□ -1.11
PRKDC-207ENST00000536483 FAM104BQ5XKR9 115 aa8.12□□□□□ -1.11
PRKDC-207ENST00000536483 LINC00269Q8N2A0 174 aa8.12□□□□□ -1.11
PRKDC-207ENST00000536483 FAT3Q8TDW7 4589 aa8.12□□□□□ -1.11
PRKDC-207ENST00000536483 LINC00614P0C842 121 aa8.11□□□□□ -1.11
PRKDC-207ENST00000536483 REG3AQ06141 175 aa8.11□□□□□ -1.11
PRKDC-207ENST00000536483 RPL39LQ96EH5 51 aaKnown RBP8.11□□□□□ -1.11
PRKDC-207ENST00000536483 RNF185Q96GF1 192 aa8.11□□□□□ -1.11
PRKDC-207ENST00000536483 UBR4Q5T4S7 5183 aa8.1□□□□□ -1.11
PRKDC-207ENST00000536483 IGLV4-60A0A075B6I1 120 aa8.1□□□□□ -1.11
PRKDC-207ENST00000536483 SDHAF1A6NFY7 115 aa8.1□□□□□ -1.11
PRKDC-207ENST00000536483 SCGB1D1O95968 90 aa8.1□□□□□ -1.11
PRKDC-207ENST00000536483 POLR2KP53803 58 aaKnown RBP8.1□□□□□ -1.11
PRKDC-207ENST00000536483 SCXQ7RTU7 201 aa8.1□□□□□ -1.11
PRKDC-207ENST00000536483 MRAP2Q96G30 205 aa8.1□□□□□ -1.11
PRKDC-207ENST00000536483 PMCHL1Q16048 86 aa8.09□□□□□ -1.11
PRKDC-207ENST00000536483 DGAT2L7PQ6IED9 249 aa8.09□□□□□ -1.11
PRKDC-207ENST00000536483 ORMDL3Q8N138 153 aa8.09□□□□□ -1.11
PRKDC-207ENST00000536483 TRBV27A0A0K0K1C4 114 aa8.08□□□□□ -1.12
PRKDC-207ENST00000536483 I3L3M4 83 aa8.08□□□□□ -1.12
PRKDC-207ENST00000536483 PPP1R17O96001 155 aa8.08□□□□□ -1.12
PRKDC-207ENST00000536483 TEX43Q6ZNM6 134 aa8.08□□□□□ -1.12
PRKDC-207ENST00000536483 C20orf202A1L168 122 aa8.07□□□□□ -1.12
PRKDC-207ENST00000536483 USP17L23D6RBM5 183 aa8.07□□□□□ -1.12
PRKDC-207ENST00000536483 UBE2L6O14933 153 aa8.07□□□□□ -1.12
PRKDC-207ENST00000536483 GAS8-AS1O95177 125 aa8.07□□□□□ -1.12
PRKDC-207ENST00000536483 KRTAP10-4P60372 401 aaPredicted RBP8.07□□□□□ -1.12
PRKDC-207ENST00000536483 RNASEKQ6P5S7 137 aaKnown RBP8.07□□□□□ -1.12
PRKDC-207ENST00000536483 CHAC1Q9BUX1 264 aa8.07□□□□□ -1.12
PRKDC-207ENST00000536483 ST20Q9HBF5 79 aa8.07□□□□□ -1.12
PRKDC-207ENST00000536483 HSPB8Q9UJY1 196 aa8.07□□□□□ -1.12
PRKDC-207ENST00000536483 PRSS47A8MTI9 375 aa8.06□□□□□ -1.12
PRKDC-207ENST00000536483 PRSS1P07477 247 aa8.06□□□□□ -1.12
PRKDC-207ENST00000536483 ZNF25P17030 456 aaPredicted RBP8.06□□□□□ -1.12
PRKDC-207ENST00000536483 SERTAD4-AS1Q5TG53 156 aa8.06□□□□□ -1.12
PRKDC-207ENST00000536483 FA2HQ7L5A8 372 aa8.06□□□□□ -1.12
PRKDC-207ENST00000536483 AMN1Q8IY45 258 aa8.06□□□□□ -1.12
PRKDC-207ENST00000536483 ZNF664Q8N3J9 261 aa8.06□□□□□ -1.12
PRKDC-207ENST00000536483 PRSS3P2Q8NHM4 247 aa8.06□□□□□ -1.12
PRKDC-207ENST00000536483 CIRBP-AS1Q8TBR5 109 aa8.06□□□□□ -1.12
PRKDC-207ENST00000536483 PRELID3AQ96N28 172 aa8.06□□□□□ -1.12
PRKDC-207ENST00000536483 AP5S1Q9NUS5 200 aa8.06□□□□□ -1.12
PRKDC-207ENST00000536483 TSHBP01222 138 aa8.05□□□□□ -1.12
PRKDC-207ENST00000536483 FGF6P10767 208 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 315 ms