RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 TRAV23DV6A0A075B6W5 121 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 IGHV3OR16-13A0A075B7E8 117 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 IGHV3-49A0A0A0MS15 119 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 IGHV3-74A0A0B4J1X5 117 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 IGHV1-3A0A0C4DH29 117 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 IGHV1-58A0A0C4DH39 117 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 RBMY1BA6NDE4 496 aaKnown RBP2.23□□□□□ -2.05
CSDE1-216ENST00000534389 RBMY1EA6NEQ0 496 aaKnown RBP2.23□□□□□ -2.05
CSDE1-216ENST00000534389 KNCNA6PVL3 124 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 IBA57-AS1B1ANH7 110 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 M0QY20 66 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 NCR3O14931 201 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 RBMY1DP0C7P1 496 aaKnown RBP2.23□□□□□ -2.05
CSDE1-216ENST00000534389 RBMY1A1P0DJD3 496 aaKnown RBP2.23□□□□□ -2.05
CSDE1-216ENST00000534389 RBMY1CP0DJD4 496 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 INAFM2P0DMQ5 153 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 MRPS36P82909 103 aaKnown RBP2.23□□□□□ -2.05
CSDE1-216ENST00000534389 RBMY1FQ15415 496 aaKnown RBP2.23□□□□□ -2.05
CSDE1-216ENST00000534389 RNASE13Q5GAN3 156 aaKnown RBP2.23□□□□□ -2.05
CSDE1-216ENST00000534389 Q6ZRP5 223 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 Q6ZVQ6 151 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 C1orf158Q8N1D5 194 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.23□□□□□ -2.05
CSDE1-216ENST00000534389 C20orf203Q8NBC4 194 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 C11orf72Q8NBR9 251 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 KRTAP2-2Q9BYT5 123 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 CADP27708 2225 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 MALRD1Q5VYJ5 2156 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 MUC4Q99102 2169 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 ARHGAP32A7KAX9 2087 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 NACAE9PAV3 2078 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 IGKV2-29A2NJV5 120 aaPredicted RBP2.22□□□□□ -2.05
CSDE1-216ENST00000534389 TMEM89A2RUT3 159 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 F8WEM9 126 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 K7EQD1 137 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 NDUFA1O15239 70 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 IGLV1-47P01700 117 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 IGHV1-8P0DP01 117 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 C15orf32Q32M92 178 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 C6orf226Q5I0X4 101 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 ENHOQ6UWT2 76 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 UNQ9165/PRO28630Q6UXU0 137 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 APRG1Q8IVJ8 170 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 C6orf223Q8N319 242 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 Q8NBF4 154 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 MRPL53Q96EL3 112 aaKnown RBP2.22□□□□□ -2.05
CSDE1-216ENST00000534389 Q9UF83 564 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 SNURFQ9Y675 71 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 DNAJC13O75165 2243 aa2.22□□□□□ -2.05
CSDE1-216ENST00000534389 IGKV2-28A0A075B6P5 120 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 A0A087X002 238 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 PPP1R17O96001 155 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 DNAL4O96015 105 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 IGKV2D-28P01615 120 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 COX7A1P24310 79 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 SAA4P35542 130 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 RBM3P98179 157 aaKnown RBP2.21□□□□□ -2.06
CSDE1-216ENST00000534389 COX6A2Q02221 97 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 KLKP1Q107X0 134 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 MIR7-3HGQ8N6C7 128 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 CNEP1R1Q8N9A8 125 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 NPBQ8NG41 125 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 SMIM11BQ8TCY0 68 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 RETNQ9HD89 108 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 PHLDA3Q9Y5J5 127 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 LENEPQ9Y5L5 61 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 HTTP42858 3142 aa2.21□□□□□ -2.06
CSDE1-216ENST00000534389 COL27A1Q8IZC6 1860 aaPredicted RBP2.2□□□□□ -2.06
CSDE1-216ENST00000534389 AHCTF1Q8WYP5 2266 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 FAM186AA6NE01 2351 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 TRAV21A0A0B4J279 112 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 IGHV3-38A0A0C4DH36 116 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 A8MU10 97 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 F6UB75 175 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 M0R1B8 84 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 M0R2N4 97 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 NDUFB3O43676 98 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 BCE1O60756 84 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 S100A4P26447 101 aaKnown RBP2.2□□□□□ -2.06
CSDE1-216ENST00000534389 SNRPD3P62318 126 aaKnown RBP2.2□□□□□ -2.06
CSDE1-216ENST00000534389 KLK9Q2XQG4 91 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 Q6ZRU5 148 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 PRR15Q8IV56 129 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 LINC00337Q8N6G1 96 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 RNF5Q99942 180 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 CHCHD7Q9BUK0 85 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 CDKN2A-AS1Q9UH64 79 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 KLK9Q9UKQ9 250 aa2.2□□□□□ -2.06
CSDE1-216ENST00000534389 SDK1Q7Z5N4 2213 aa2.19□□□□□ -2.06
CSDE1-216ENST00000534389 MED13Q9UHV7 2174 aa2.19□□□□□ -2.06
CSDE1-216ENST00000534389 IGHV4-30-2A0A087WSY4 118 aa2.19□□□□□ -2.06
CSDE1-216ENST00000534389 TRAV13-2A0A0B4J235 113 aa2.19□□□□□ -2.06
CSDE1-216ENST00000534389 IGHV3-16A0A0C4DH30 117 aa2.19□□□□□ -2.06
CSDE1-216ENST00000534389 TRBV7-4A0A0J9YYF1 115 aa2.19□□□□□ -2.06
CSDE1-216ENST00000534389 TRBV10-3A0A0K0K1G6 114 aa2.19□□□□□ -2.06
CSDE1-216ENST00000534389 A0A1W2PNU3 283 aaPredicted RBP2.19□□□□□ -2.06
CSDE1-216ENST00000534389 PLAC8L1A1L4L8 177 aa2.19□□□□□ -2.06
CSDE1-216ENST00000534389 CD28P10747 220 aa2.19□□□□□ -2.06
CSDE1-216ENST00000534389 CD164Q04900 197 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms