RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 APCSP02743 223 aa12.34□□□□□ -0.43
SSH3-209ENST00000532600 ANGP03950 147 aaKnown RBP12.34□□□□□ -0.43
SSH3-209ENST00000532600 RBX1P62877 108 aa12.34□□□□□ -0.43
SSH3-209ENST00000532600 KRTAP26-1Q6PEX3 210 aa12.34□□□□□ -0.43
SSH3-209ENST00000532600 PRR34Q9NV39 138 aa12.34□□□□□ -0.43
SSH3-209ENST00000532600 PHOX2AO14813 284 aa12.33□□□□□ -0.44
SSH3-209ENST00000532600 HLA-DQA1P01909 254 aa12.33□□□□□ -0.44
SSH3-209ENST00000532600 ESDP10768 282 aa12.33□□□□□ -0.44
SSH3-209ENST00000532600 RPL32P62910 135 aaKnown RBP12.33□□□□□ -0.44
SSH3-209ENST00000532600 C1orf43Q9BWL3 253 aa12.33□□□□□ -0.44
SSH3-209ENST00000532600 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.32□□□□□ -0.44
SSH3-209ENST00000532600 IGKV2-29A2NJV5 120 aaPredicted RBP12.32□□□□□ -0.44
SSH3-209ENST00000532600 SCXQ7RTU7 201 aa12.32□□□□□ -0.44
SSH3-209ENST00000532600 SMIM2Q9BVW6 85 aa12.32□□□□□ -0.44
SSH3-209ENST00000532600 CRPP02741 224 aa12.31□□□□□ -0.44
SSH3-209ENST00000532600 CLPSL2Q6UWE3 100 aa12.31□□□□□ -0.44
SSH3-209ENST00000532600 LINC00269Q8N2A0 174 aa12.31□□□□□ -0.44
SSH3-209ENST00000532600 MRPL18Q9H0U6 180 aaKnown RBP12.31□□□□□ -0.44
SSH3-209ENST00000532600 SMCO4Q9NRQ5 59 aa12.31□□□□□ -0.44
SSH3-209ENST00000532600 PRSS47A8MTI9 375 aa12.3□□□□□ -0.44
SSH3-209ENST00000532600 LINC00528Q8N1L1 170 aa12.3□□□□□ -0.44
SSH3-209ENST00000532600 LAMTOR2Q9Y2Q5 125 aa12.3□□□□□ -0.44
SSH3-209ENST00000532600 IGLV4-60A0A075B6I1 120 aa12.29□□□□□ -0.44
SSH3-209ENST00000532600 USP17L23D6RBM5 183 aa12.29□□□□□ -0.44
SSH3-209ENST00000532600 PKIAP61925 76 aa12.29□□□□□ -0.44
SSH3-209ENST00000532600 MIAQ16674 131 aa12.29□□□□□ -0.44
SSH3-209ENST00000532600 COX19Q49B96 90 aa12.29□□□□□ -0.44
SSH3-209ENST00000532600 C20orf203Q8NBC4 194 aa12.29□□□□□ -0.44
SSH3-209ENST00000532600 LOC389332A0A1B0GUA5 103 aa12.28□□□□□ -0.44
SSH3-209ENST00000532600 TCAPO15273 167 aa12.28□□□□□ -0.44
SSH3-209ENST00000532600 SCO1O75880 301 aa12.28□□□□□ -0.44
SSH3-209ENST00000532600 MT-ND6P03923 174 aa12.28□□□□□ -0.44
SSH3-209ENST00000532600 KRTAP10-4P60372 401 aaPredicted RBP12.28□□□□□ -0.44
SSH3-209ENST00000532600 ALKBH7Q9BT30 221 aaPredicted RBP12.28□□□□□ -0.44
SSH3-209ENST00000532600 PRSS1P07477 247 aa12.27□□□□□ -0.45
SSH3-209ENST00000532600 FCER1GP30273 86 aa12.27□□□□□ -0.45
SSH3-209ENST00000532600 FABP9Q0Z7S8 132 aa12.27□□□□□ -0.45
SSH3-209ENST00000532600 KIR2DL4Q99706 377 aa12.27□□□□□ -0.45
SSH3-209ENST00000532600 CHAC1Q9BUX1 264 aa12.27□□□□□ -0.45
SSH3-209ENST00000532600 MAP1LC3AQ9H492 121 aa12.27□□□□□ -0.45
SSH3-209ENST00000532600 A0A1B0GUV1 79 aa12.26□□□□□ -0.45
SSH3-209ENST00000532600 UBE2L6O14933 153 aa12.26□□□□□ -0.45
SSH3-209ENST00000532600 FGF6P10767 208 aa12.26□□□□□ -0.45
SSH3-209ENST00000532600 CIRBP-AS1Q8TBR5 109 aa12.26□□□□□ -0.45
SSH3-209ENST00000532600 TRAPPC1Q9Y5R8 145 aa12.26□□□□□ -0.45
SSH3-209ENST00000532600 C14orf177Q52M58 125 aa12.25□□□□□ -0.45
SSH3-209ENST00000532600 H7C423 109 aa12.24□□□□□ -0.45
SSH3-209ENST00000532600 REG3AQ06141 175 aa12.24□□□□□ -0.45
SSH3-209ENST00000532600 Q8N8P6 123 aa12.24□□□□□ -0.45
SSH3-209ENST00000532600 IGLV10-54A0A075B6I4 117 aa12.23□□□□□ -0.45
SSH3-209ENST00000532600 IFI27P40305 119 aaPredicted RBP12.23□□□□□ -0.45
SSH3-209ENST00000532600 COLCA2A8K830 154 aa12.22□□□□□ -0.45
SSH3-209ENST00000532600 PLA2G1BP04054 148 aaKnown RBP12.22□□□□□ -0.45
SSH3-209ENST00000532600 RPL39P62891 51 aaKnown RBP12.22□□□□□ -0.45
SSH3-209ENST00000532600 MRPL52Q86TS9 123 aaKnown RBP12.22□□□□□ -0.45
SSH3-209ENST00000532600 AMMECR1LQ6DCA0 310 aa12.21□□□□□ -0.45
SSH3-209ENST00000532600 RNASEKQ6P5S7 137 aaKnown RBP12.21□□□□□ -0.45
SSH3-209ENST00000532600 UBE2D4Q9Y2X8 147 aa12.21□□□□□ -0.45
SSH3-209ENST00000532600 FAM104AQ969W3 186 aa12.2□□□□□ -0.46
SSH3-209ENST00000532600 LRP1Q07954 4544 aaKnown RBP12.2□□□□□ -0.46
SSH3-209ENST00000532600 PANO1I0J062 215 aa12.19□□□□□ -0.46
SSH3-209ENST00000532600 ATP6V1G1O75348 118 aa12.19□□□□□ -0.46
SSH3-209ENST00000532600 ZNF25P17030 456 aaPredicted RBP12.19□□□□□ -0.46
SSH3-209ENST00000532600 C9orf163Q8N9P6 203 aa12.19□□□□□ -0.46
SSH3-209ENST00000532600 NXT2Q9NPJ8 142 aaKnown RBP12.19□□□□□ -0.46
SSH3-209ENST00000532600 RAB5AP20339 215 aa12.18□□□□□ -0.46
SSH3-209ENST00000532600 DGAT2L7PQ6IED9 249 aa12.18□□□□□ -0.46
SSH3-209ENST00000532600 CDC42SE2Q9NRR3 84 aa12.18□□□□□ -0.46
SSH3-209ENST00000532600 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.18□□□□□ -0.46
SSH3-209ENST00000532600 LINC01546A6NGU7 62 aa12.17□□□□□ -0.46
SSH3-209ENST00000532600 SLPIP03973 132 aa12.17□□□□□ -0.46
SSH3-209ENST00000532600 OR5A1Q8NGJ0 315 aa12.17□□□□□ -0.46
SSH3-209ENST00000532600 C18orf32Q8TCD1 76 aa12.17□□□□□ -0.46
SSH3-209ENST00000532600 URB1-AS1Q96HZ7 61 aa12.17□□□□□ -0.46
SSH3-209ENST00000532600 TRAV8-4A0A0B4J246 113 aa12.16□□□□□ -0.46
SSH3-209ENST00000532600 SDIM1Q6ZPB5 146 aa12.16□□□□□ -0.46
SSH3-209ENST00000532600 Q6ZUT4 128 aa12.16□□□□□ -0.46
SSH3-209ENST00000532600 OPRPNQ99935 248 aaPredicted RBP12.16□□□□□ -0.46
SSH3-209ENST00000532600 TIMM21Q9BVV7 248 aa12.16□□□□□ -0.46
SSH3-209ENST00000532600 PKHD1L1Q86WI1 4243 aa12.16□□□□□ -0.46
SSH3-209ENST00000532600 FAT3Q8TDW7 4589 aa12.15□□□□□ -0.46
SSH3-209ENST00000532600 IGKV3OR2-268A0A0C4DH90 116 aa12.15□□□□□ -0.46
SSH3-209ENST00000532600 TRGC2P03986 189 aa12.15□□□□□ -0.46
SSH3-209ENST00000532600 RNASE13Q5GAN3 156 aaKnown RBP12.15□□□□□ -0.46
SSH3-209ENST00000532600 ZNF664Q8N3J9 261 aa12.15□□□□□ -0.46
SSH3-209ENST00000532600 PRSS3P2Q8NHM4 247 aa12.15□□□□□ -0.46
SSH3-209ENST00000532600 TMEM101Q96IK0 257 aa12.15□□□□□ -0.46
SSH3-209ENST00000532600 CSDC2Q9Y534 153 aaKnown RBP12.15□□□□□ -0.46
SSH3-209ENST00000532600 KRTAP29-1A8MX34 341 aaPredicted RBP12.14□□□□□ -0.47
SSH3-209ENST00000532600 CNBPP62633 177 aaKnown RBP12.14□□□□□ -0.47
SSH3-209ENST00000532600 hDV102S1A0JD36 115 aa12.13□□□□□ -0.47
SSH3-209ENST00000532600 K7EMI3 77 aa12.13□□□□□ -0.47
SSH3-209ENST00000532600 ORMDL2Q53FV1 153 aa12.13□□□□□ -0.47
SSH3-209ENST00000532600 TMEM18Q96B42 140 aa12.13□□□□□ -0.47
SSH3-209ENST00000532600 SPANXA1Q9NS26 97 aa12.13□□□□□ -0.47
SSH3-209ENST00000532600 C2orf66Q6UXQ4 117 aa12.12□□□□□ -0.47
SSH3-209ENST00000532600 C15orf56Q8N910 161 aa12.12□□□□□ -0.47
SSH3-209ENST00000532600 J3QL48 77 aa12.11□□□□□ -0.47
SSH3-209ENST00000532600 S100A1P23297 94 aa12.11□□□□□ -0.47
SSH3-209ENST00000532600 FA2HQ7L5A8 372 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 210.7 ms