RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 VAMP8Q9BV40 100 aa15.11■□□□□ 0.01
PACSIN3-209ENST00000532457 MRPL52Q86TS9 123 aaKnown RBP15.1■□□□□ 0.01
PACSIN3-209ENST00000532457 TIMM21Q9BVV7 248 aa15.1■□□□□ 0.01
PACSIN3-209ENST00000532457 CST9LQ9H4G1 147 aa15.1■□□□□ 0.01
PACSIN3-209ENST00000532457 SPANXA1Q9NS26 97 aa15.1■□□□□ 0.01
PACSIN3-209ENST00000532457 STARD9Q9P2P6 4700 aa15.1■□□□□ 0.01
PACSIN3-209ENST00000532457 A0A087WX48 190 aa15.1■□□□□ 0.01
PACSIN3-209ENST00000532457 SH2D6Q7Z4S9 175 aa15.1■□□□□ 0.01
PACSIN3-209ENST00000532457 CHCHD5Q9BSY4 110 aa15.1■□□□□ 0.01
PACSIN3-209ENST00000532457 TRAV12-1A0A0B4J245 112 aa15.09■□□□□ 0.01
PACSIN3-209ENST00000532457 Q6ZUT4 128 aa15.09■□□□□ 0.01
PACSIN3-209ENST00000532457 MRPL35Q9NZE8 188 aaKnown RBP15.09■□□□□ 0.01
PACSIN3-209ENST00000532457 DDTP30046 118 aa15.08■□□□□ 0.01
PACSIN3-209ENST00000532457 MAJINQ3KP22 176 aa15.08■□□□□ 0.01
PACSIN3-209ENST00000532457 CASC10Q5T4H9 136 aa15.08■□□□□ 0.01
PACSIN3-209ENST00000532457 IGLL5B9A064 214 aa15.08■□□□□ 0
PACSIN3-209ENST00000532457 UBE2L6O14933 153 aa15.08■□□□□ 0
PACSIN3-209ENST00000532457 PMVKQ15126 192 aa15.08■□□□□ 0
PACSIN3-209ENST00000532457 ESRGQ1W209 222 aa15.08■□□□□ 0
PACSIN3-209ENST00000532457 AMELXQ99217 191 aa15.08■□□□□ 0
PACSIN3-209ENST00000532457 IGLV4-60A0A075B6I1 120 aa15.07■□□□□ 0
PACSIN3-209ENST00000532457 H7C423 109 aa15.07■□□□□ 0
PACSIN3-209ENST00000532457 PAM16Q9Y3D7 125 aa15.07■□□□□ 0
PACSIN3-209ENST00000532457 CSDC2Q9Y534 153 aaKnown RBP15.07■□□□□ 0
PACSIN3-209ENST00000532457 Q8N3U1 123 aa15.06■□□□□ 0
PACSIN3-209ENST00000532457 VCX2Q9H322 139 aa15.06■□□□□ 0
PACSIN3-209ENST00000532457 DYNC2H1Q8NCM8 4307 aaKnown RBP15.06■□□□□ 0
PACSIN3-209ENST00000532457 C20orf202A1L168 122 aa15.06■□□□□ 0
PACSIN3-209ENST00000532457 TCTAP57738 103 aa15.06■□□□□ 0
PACSIN3-209ENST00000532457 MRPS36P82909 103 aaKnown RBP15.06■□□□□ 0
PACSIN3-209ENST00000532457 LELP1Q5T871 98 aa15.06■□□□□ 0
PACSIN3-209ENST00000532457 CDC42SE2Q9NRR3 84 aa15.06■□□□□ 0
PACSIN3-209ENST00000532457 CHTOPQ9Y3Y2 248 aaKnown RBP15.06■□□□□ 0
PACSIN3-209ENST00000532457 DGAT2L7PQ6IED9 249 aa15.05■□□□□ -0
PACSIN3-209ENST00000532457 NPSP0C0P6 89 aa15.04■□□□□ -0
PACSIN3-209ENST00000532457 AMMECR1LQ6DCA0 310 aa15.04■□□□□ -0
PACSIN3-209ENST00000532457 TENM2Q9NT68 2774 aa15.04■□□□□ -0
PACSIN3-209ENST00000532457 IGLV4-69A0A075B6H9 119 aa15.03■□□□□ -0
PACSIN3-209ENST00000532457 TMEM262E9PQX1 116 aa15.03■□□□□ -0
PACSIN3-209ENST00000532457 TIRAPP58753 221 aa15.03■□□□□ -0
PACSIN3-209ENST00000532457 MPV17L2Q567V2 206 aa15.03■□□□□ -0
PACSIN3-209ENST00000532457 OR5A1Q8NGJ0 315 aa15.03■□□□□ -0
PACSIN3-209ENST00000532457 PLECQ15149 4684 aaKnown RBP15.02■□□□□ -0
PACSIN3-209ENST00000532457 hDV102S1A0JD36 115 aa15.02■□□□□ -0
PACSIN3-209ENST00000532457 F8VRH5 84 aa15.02■□□□□ -0
PACSIN3-209ENST00000532457 C15orf53Q8NAA6 179 aa15.02■□□□□ -0
PACSIN3-209ENST00000532457 RBX1P62877 108 aa15.01□□□□□ -0.01
PACSIN3-209ENST00000532457 SPATA45Q537H7 98 aa15.01□□□□□ -0.01
PACSIN3-209ENST00000532457 TRAV9-2A0A087WT02 112 aa15.01□□□□□ -0.01
PACSIN3-209ENST00000532457 PAPPA-AS1Q5QFB9 102 aa15.01□□□□□ -0.01
PACSIN3-209ENST00000532457 DPM2O94777 84 aa15□□□□□ -0.01
PACSIN3-209ENST00000532457 IGKCP01834 107 aa15□□□□□ -0.01
PACSIN3-209ENST00000532457 TMEM101Q96IK0 257 aa15□□□□□ -0.01
PACSIN3-209ENST00000532457 A0A0J9YXV3 536 aa14.99□□□□□ -0.01
PACSIN3-209ENST00000532457 A0A1B0GUV1 79 aa14.99□□□□□ -0.01
PACSIN3-209ENST00000532457 ZNF25P17030 456 aaPredicted RBP14.99□□□□□ -0.01
PACSIN3-209ENST00000532457 STPG4Q8N801 248 aa14.99□□□□□ -0.01
PACSIN3-209ENST00000532457 C11orf86A6NJI1 115 aa14.98□□□□□ -0.01
PACSIN3-209ENST00000532457 SMAGPQ0VAQ4 97 aa14.97□□□□□ -0.01
PACSIN3-209ENST00000532457 WFDC10BQ8IUB3 73 aa14.97□□□□□ -0.01
PACSIN3-209ENST00000532457 UBE2D1P51668 147 aa14.96□□□□□ -0.01
PACSIN3-209ENST00000532457 MIEN1Q9BRT3 115 aa14.96□□□□□ -0.01
PACSIN3-209ENST00000532457 APLNQ9ULZ1 77 aa14.96□□□□□ -0.01
PACSIN3-209ENST00000532457 C14orf144Q96I85 54 aa14.96□□□□□ -0.01
PACSIN3-209ENST00000532457 PLNP26678 52 aa14.95□□□□□ -0.02
PACSIN3-209ENST00000532457 IGLC3P0DOY3 106 aa14.94□□□□□ -0.02
PACSIN3-209ENST00000532457 NFE4Q86UQ8 179 aa14.94□□□□□ -0.02
PACSIN3-209ENST00000532457 LINC00588Q9Y4M8 146 aa14.94□□□□□ -0.02
PACSIN3-209ENST00000532457 TRAV13-1A0A0B4J241 112 aa14.94□□□□□ -0.02
PACSIN3-209ENST00000532457 TRAV8-6A0A0B4J262 113 aa14.94□□□□□ -0.02
PACSIN3-209ENST00000532457 COX6A2Q02221 97 aa14.94□□□□□ -0.02
PACSIN3-209ENST00000532457 ANKRD39Q53RE8 183 aa14.94□□□□□ -0.02
PACSIN3-209ENST00000532457 C2orf88Q9BSF0 95 aa14.93□□□□□ -0.02
PACSIN3-209ENST00000532457 IGKV3OR2-268A0A0C4DH90 116 aa14.92□□□□□ -0.02
PACSIN3-209ENST00000532457 LINC00242Q5T6M2 205 aa14.92□□□□□ -0.02
PACSIN3-209ENST00000532457 CHAC1Q9BUX1 264 aa14.92□□□□□ -0.02
PACSIN3-209ENST00000532457 IGHV3-30P01768 117 aa14.91□□□□□ -0.02
PACSIN3-209ENST00000532457 IGHV3-33P01772 117 aa14.91□□□□□ -0.02
PACSIN3-209ENST00000532457 IGHV3-30-3P0DP02 117 aa14.91□□□□□ -0.02
PACSIN3-209ENST00000532457 IGHV3-30-5P0DP03 117 aa14.91□□□□□ -0.02
PACSIN3-209ENST00000532457 LINC00269Q8N2A0 174 aa14.91□□□□□ -0.02
PACSIN3-209ENST00000532457 UQCR10Q9UDW1 63 aa14.91□□□□□ -0.02
PACSIN3-209ENST00000532457 LYSTQ99698 3801 aa14.9□□□□□ -0.02
PACSIN3-209ENST00000532457 TINCRA0A1B0GVN0 87 aa14.9□□□□□ -0.02
PACSIN3-209ENST00000532457 HSBP1L1C9JCN9 74 aa14.9□□□□□ -0.02
PACSIN3-209ENST00000532457 CLPSL2Q6UWE3 100 aa14.9□□□□□ -0.02
PACSIN3-209ENST00000532457 ANGP03950 147 aaKnown RBP14.89□□□□□ -0.03
PACSIN3-209ENST00000532457 ZNF22P17026 224 aaPredicted RBP14.89□□□□□ -0.03
PACSIN3-209ENST00000532457 FAM19A3Q7Z5A8 133 aa14.89□□□□□ -0.03
PACSIN3-209ENST00000532457 IGKV2D-26A0A0A0MRZ7 120 aa14.89□□□□□ -0.03
PACSIN3-209ENST00000532457 LINC00959A0A1B0GUT2 108 aa14.88□□□□□ -0.03
PACSIN3-209ENST00000532457 TMEM170BQ5T4T1 132 aa14.88□□□□□ -0.03
PACSIN3-209ENST00000532457 KLK12Q9UKR0 248 aa14.87□□□□□ -0.03
PACSIN3-209ENST00000532457 MRPS16Q9Y3D3 137 aaKnown RBP14.87□□□□□ -0.03
PACSIN3-209ENST00000532457 CCL18P55774 89 aa14.87□□□□□ -0.03
PACSIN3-209ENST00000532457 TP73-AS1Q9UF72 201 aa14.85□□□□□ -0.03
PACSIN3-209ENST00000532457 CDKN2A-AS1Q9UH64 79 aa14.85□□□□□ -0.03
PACSIN3-209ENST00000532457 REG3AQ06141 175 aa14.85□□□□□ -0.03
PACSIN3-209ENST00000532457 ENHOQ6UWT2 76 aa14.85□□□□□ -0.03
PACSIN3-209ENST00000532457 IGLV5-45A0A087WSX0 123 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms