RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 SCGB3A1Q96QR1 104 aa5.41□□□□□ -1.54
SSBP3-211ENST00000528787 C1orf43Q9BWL3 253 aa5.41□□□□□ -1.54
SSBP3-211ENST00000528787 VCX2Q9H322 139 aa5.41□□□□□ -1.54
SSBP3-211ENST00000528787 UBE2D4Q9Y2X8 147 aa5.41□□□□□ -1.54
SSBP3-211ENST00000528787 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.4□□□□□ -1.54
SSBP3-211ENST00000528787 IGKV2-29A2NJV5 120 aaPredicted RBP5.4□□□□□ -1.54
SSBP3-211ENST00000528787 PSCAO43653 123 aa5.4□□□□□ -1.54
SSBP3-211ENST00000528787 IGHV3-30P01768 117 aa5.4□□□□□ -1.54
SSBP3-211ENST00000528787 IGHV3-33P01772 117 aa5.4□□□□□ -1.54
SSBP3-211ENST00000528787 IGHV3-30-3P0DP02 117 aa5.4□□□□□ -1.54
SSBP3-211ENST00000528787 IGHV3-30-5P0DP03 117 aa5.4□□□□□ -1.54
SSBP3-211ENST00000528787 REG3AQ06141 175 aa5.4□□□□□ -1.54
SSBP3-211ENST00000528787 MPV17L2Q567V2 206 aa5.4□□□□□ -1.54
SSBP3-211ENST00000528787 KLK12Q9UKR0 248 aa5.4□□□□□ -1.54
SSBP3-211ENST00000528787 HIST1H2BKO60814 126 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 HIST1H2BJP06899 126 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 HIST1H2BOP23527 126 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 HIST1H2BBP33778 126 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 HIST1H2BDP58876 126 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 HIST1H2BCP62807 126 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 HIST2H2BEQ16778 126 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 C14orf177Q52M58 125 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 COA6Q5JTJ3 125 aaKnown RBP5.39□□□□□ -1.55
SSBP3-211ENST00000528787 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.39□□□□□ -1.55
SSBP3-211ENST00000528787 CFAP161Q6P656 301 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 LINC00336Q6ZUF6 198 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 C6orf223Q8N319 242 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 HIST1H2BHQ93079 126 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 HIST1H2BNQ99877 126 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 HIST1H2BMQ99879 126 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 CDC42SE2Q9NRR3 84 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 PRR34Q9NV39 138 aa5.39□□□□□ -1.55
SSBP3-211ENST00000528787 LEPROTL1O95214 131 aa5.38□□□□□ -1.55
SSBP3-211ENST00000528787 S100A2P29034 98 aa5.38□□□□□ -1.55
SSBP3-211ENST00000528787 LINC00269Q8N2A0 174 aa5.38□□□□□ -1.55
SSBP3-211ENST00000528787 UBE2WQ96B02 151 aa5.38□□□□□ -1.55
SSBP3-211ENST00000528787 IGIPA6NJ69 53 aa5.37□□□□□ -1.55
SSBP3-211ENST00000528787 IFITM10A6NMD0 228 aa5.37□□□□□ -1.55
SSBP3-211ENST00000528787 SERF1AO75920 110 aa5.37□□□□□ -1.55
SSBP3-211ENST00000528787 APOMO95445 188 aa5.37□□□□□ -1.55
SSBP3-211ENST00000528787 HERVK_113P63121 156 aa5.37□□□□□ -1.55
SSBP3-211ENST00000528787 PMVKQ15126 192 aa5.37□□□□□ -1.55
SSBP3-211ENST00000528787 Q6ZR54 194 aa5.37□□□□□ -1.55
SSBP3-211ENST00000528787 Q8N976 141 aa5.37□□□□□ -1.55
SSBP3-211ENST00000528787 MAP1LC3CQ9BXW4 147 aa5.37□□□□□ -1.55
SSBP3-211ENST00000528787 PKIGQ9Y2B9 76 aa5.37□□□□□ -1.55
SSBP3-211ENST00000528787 IGKV2D-24A0A075B6R9 120 aa5.36□□□□□ -1.55
SSBP3-211ENST00000528787 C20orf202A1L168 122 aa5.36□□□□□ -1.55
SSBP3-211ENST00000528787 H3BRM9 83 aa5.36□□□□□ -1.55
SSBP3-211ENST00000528787 PRSS1P07477 247 aa5.36□□□□□ -1.55
SSBP3-211ENST00000528787 NDUFA6P56556 154 aa5.36□□□□□ -1.55
SSBP3-211ENST00000528787 RPL39P62891 51 aaKnown RBP5.36□□□□□ -1.55
SSBP3-211ENST00000528787 IFI27L1Q96BM0 104 aa5.36□□□□□ -1.55
SSBP3-211ENST00000528787 GEMIN7Q9H840 131 aaKnown RBP5.36□□□□□ -1.55
SSBP3-211ENST00000528787 IGLV4-60A0A075B6I1 120 aa5.35□□□□□ -1.55
SSBP3-211ENST00000528787 IGLV4-3A0A075B6K6 122 aa5.35□□□□□ -1.55
SSBP3-211ENST00000528787 TRAV12-1A0A0B4J245 112 aa5.35□□□□□ -1.55
SSBP3-211ENST00000528787 LINC00959A0A1B0GUT2 108 aa5.35□□□□□ -1.55
SSBP3-211ENST00000528787 MALP21145 153 aa5.35□□□□□ -1.55
SSBP3-211ENST00000528787 S100A12P80511 92 aa5.35□□□□□ -1.55
SSBP3-211ENST00000528787 PDZD11Q5EBL8 140 aa5.35□□□□□ -1.55
SSBP3-211ENST00000528787 CD164L2Q6UWJ8 174 aa5.35□□□□□ -1.55
SSBP3-211ENST00000528787 AMELXQ99217 191 aa5.35□□□□□ -1.55
SSBP3-211ENST00000528787 Q9HAA7 133 aa5.35□□□□□ -1.55
SSBP3-211ENST00000528787 STARD9Q9P2P6 4700 aa5.35□□□□□ -1.55
SSBP3-211ENST00000528787 TRAV13-1A0A0B4J241 112 aa5.34□□□□□ -1.55
SSBP3-211ENST00000528787 IGKV3OR2-268A0A0C4DH90 116 aa5.34□□□□□ -1.55
SSBP3-211ENST00000528787 F8WDY8 70 aa5.34□□□□□ -1.55
SSBP3-211ENST00000528787 M0R2N4 97 aa5.34□□□□□ -1.55
SSBP3-211ENST00000528787 PLNP26678 52 aa5.34□□□□□ -1.55
SSBP3-211ENST00000528787 SFTA2Q6UW10 78 aa5.34□□□□□ -1.55
SSBP3-211ENST00000528787 ENHOQ6UWT2 76 aa5.34□□□□□ -1.55
SSBP3-211ENST00000528787 FAM19A3Q7Z5A8 133 aa5.34□□□□□ -1.55
SSBP3-211ENST00000528787 LINC01561Q8N1V8 128 aa5.34□□□□□ -1.55
SSBP3-211ENST00000528787 DEFB104AQ8WTQ1 72 aa5.34□□□□□ -1.55
SSBP3-211ENST00000528787 CHCHD10Q8WYQ3 142 aaPredicted RBP5.34□□□□□ -1.55
SSBP3-211ENST00000528787 TINCRA0A1B0GVN0 87 aa5.33□□□□□ -1.56
SSBP3-211ENST00000528787 COX7A2LO14548 114 aa5.33□□□□□ -1.56
SSBP3-211ENST00000528787 Q6ZUT4 128 aa5.33□□□□□ -1.56
SSBP3-211ENST00000528787 BAALCQ8WXS3 180 aa5.33□□□□□ -1.56
SSBP3-211ENST00000528787 URB1-AS1Q96HZ7 61 aa5.33□□□□□ -1.56
SSBP3-211ENST00000528787 CST9LQ9H4G1 147 aa5.33□□□□□ -1.56
SSBP3-211ENST00000528787 DYNC2H1Q8NCM8 4307 aaKnown RBP5.33□□□□□ -1.56
SSBP3-211ENST00000528787 IGHV1-58A0A0C4DH39 117 aa5.32□□□□□ -1.56
SSBP3-211ENST00000528787 XCL1P47992 114 aa5.32□□□□□ -1.56
SSBP3-211ENST00000528787 UBE2D1P51668 147 aa5.32□□□□□ -1.56
SSBP3-211ENST00000528787 PMCHL1Q16048 86 aa5.32□□□□□ -1.56
SSBP3-211ENST00000528787 CLPSL2Q6UWE3 100 aa5.32□□□□□ -1.56
SSBP3-211ENST00000528787 SPATA12Q7Z6I5 190 aa5.32□□□□□ -1.56
SSBP3-211ENST00000528787 FAM19A2Q8N3H0 131 aa5.32□□□□□ -1.56
SSBP3-211ENST00000528787 CHTOPQ9Y3Y2 248 aaKnown RBP5.32□□□□□ -1.56
SSBP3-211ENST00000528787 A0A096LNJ9 63 aa5.31□□□□□ -1.56
SSBP3-211ENST00000528787 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.31□□□□□ -1.56
SSBP3-211ENST00000528787 GAGE12HA6NDE8 117 aa5.31□□□□□ -1.56
SSBP3-211ENST00000528787 PRSS29PA6NIE9 313 aa5.31□□□□□ -1.56
SSBP3-211ENST00000528787 F8VRH5 84 aa5.31□□□□□ -1.56
SSBP3-211ENST00000528787 PRSS2P07478 247 aa5.31□□□□□ -1.56
SSBP3-211ENST00000528787 FABP4P15090 132 aa5.31□□□□□ -1.56
SSBP3-211ENST00000528787 HERVK_113P61574 105 aa5.31□□□□□ -1.56
SSBP3-211ENST00000528787 CDPF1Q6NVV7 123 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms