RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TRBV6-8A0A0A6YYG3 113 aa11.01□□□□□ -0.65
USP47-207ENST00000527733 IGHV1-58A0A0C4DH39 117 aa11.01□□□□□ -0.65
USP47-207ENST00000527733 C9JAW5 83 aa11□□□□□ -0.65
USP47-207ENST00000527733 CRYBA4P53673 196 aa11□□□□□ -0.65
USP47-207ENST00000527733 CFAP46Q8IYW2 2715 aa11□□□□□ -0.65
USP47-207ENST00000527733 Q6ZVH6 145 aa11□□□□□ -0.65
USP47-207ENST00000527733 SPAG11BQ08648 103 aa11□□□□□ -0.65
USP47-207ENST00000527733 C12orf74Q32Q52 190 aa11□□□□□ -0.65
USP47-207ENST00000527733 NDUFA1O15239 70 aa10.99□□□□□ -0.65
USP47-207ENST00000527733 CXCL5P42830 114 aa10.99□□□□□ -0.65
USP47-207ENST00000527733 POLR2KP53803 58 aaKnown RBP10.99□□□□□ -0.65
USP47-207ENST00000527733 LINC00269Q8N2A0 174 aa10.99□□□□□ -0.65
USP47-207ENST00000527733 IGLV4-3A0A075B6K6 122 aa10.99□□□□□ -0.65
USP47-207ENST00000527733 PRB2P02812 416 aaPredicted RBP10.99□□□□□ -0.65
USP47-207ENST00000527733 TRAV10A0A0B4J240 114 aa10.98□□□□□ -0.65
USP47-207ENST00000527733 TINCRA0A1B0GVN0 87 aa10.98□□□□□ -0.65
USP47-207ENST00000527733 K7ERJ3 54 aa10.98□□□□□ -0.65
USP47-207ENST00000527733 C1orf158Q8N1D5 194 aa10.98□□□□□ -0.65
USP47-207ENST00000527733 HIGD1BQ9P298 99 aa10.98□□□□□ -0.65
USP47-207ENST00000527733 REG3AQ06141 175 aa10.98□□□□□ -0.65
USP47-207ENST00000527733 USP24Q9UPU5 2620 aa10.98□□□□□ -0.65
USP47-207ENST00000527733 TSPAN13O95857 204 aa10.97□□□□□ -0.65
USP47-207ENST00000527733 PKIGQ9Y2B9 76 aa10.97□□□□□ -0.65
USP47-207ENST00000527733 C10orf126Q8N4M7 172 aa10.97□□□□□ -0.65
USP47-207ENST00000527733 LURAP1LQ8IV03 231 aa10.97□□□□□ -0.65
USP47-207ENST00000527733 F8WEM9 126 aa10.96□□□□□ -0.65
USP47-207ENST00000527733 CFC1BP0CG36 223 aa10.96□□□□□ -0.65
USP47-207ENST00000527733 CFC1P0CG37 223 aa10.96□□□□□ -0.65
USP47-207ENST00000527733 SND1-IT1Q9HBX3 110 aa10.96□□□□□ -0.65
USP47-207ENST00000527733 GAS8-AS1O95177 125 aa10.96□□□□□ -0.66
USP47-207ENST00000527733 PYGO1Q9Y3Y4 419 aa10.96□□□□□ -0.66
USP47-207ENST00000527733 A0A096LNT2 108 aa10.96□□□□□ -0.66
USP47-207ENST00000527733 GAGE12HA6NDE8 117 aa10.96□□□□□ -0.66
USP47-207ENST00000527733 TSHBP01222 138 aa10.96□□□□□ -0.66
USP47-207ENST00000527733 MUSTN1Q8IVN3 82 aa10.96□□□□□ -0.66
USP47-207ENST00000527733 FLNAP21333 2647 aaKnown RBP10.95□□□□□ -0.66
USP47-207ENST00000527733 AKAP13Q12802 2813 aa10.95□□□□□ -0.66
USP47-207ENST00000527733 DSPP15924 2871 aaKnown RBP10.95□□□□□ -0.66
USP47-207ENST00000527733 A4D1N5 150 aa10.94□□□□□ -0.66
USP47-207ENST00000527733 TTC32Q5I0X7 151 aa10.94□□□□□ -0.66
USP47-207ENST00000527733 Q8N976 141 aa10.94□□□□□ -0.66
USP47-207ENST00000527733 CDKN2A-AS1Q9UH64 79 aa10.94□□□□□ -0.66
USP47-207ENST00000527733 RPL18AQ02543 176 aaKnown RBP10.94□□□□□ -0.66
USP47-207ENST00000527733 TRAV8-4A0A0B4J246 113 aa10.94□□□□□ -0.66
USP47-207ENST00000527733 GAGE2EQ4V326 116 aa10.94□□□□□ -0.66
USP47-207ENST00000527733 KPRPQ5T749 579 aaPredicted RBP10.94□□□□□ -0.66
USP47-207ENST00000527733 GAGE2DQ9UEU5 116 aa10.94□□□□□ -0.66
USP47-207ENST00000527733 A0A1W2PPM0 123 aa10.94□□□□□ -0.66
USP47-207ENST00000527733 FHL3Q13643 280 aa10.94□□□□□ -0.66
USP47-207ENST00000527733 KLK9Q2XQG4 91 aa10.94□□□□□ -0.66
USP47-207ENST00000527733 LOC100131303A0A0U1RQF7 123 aa10.93□□□□□ -0.66
USP47-207ENST00000527733 A0A1B0GV72 72 aa10.93□□□□□ -0.66
USP47-207ENST00000527733 DAND5Q8N907 189 aa10.92□□□□□ -0.66
USP47-207ENST00000527733 CHCHD10Q8WYQ3 142 aaPredicted RBP10.92□□□□□ -0.66
USP47-207ENST00000527733 ITPR3Q14573 2671 aa10.92□□□□□ -0.66
USP47-207ENST00000527733 RBX1P62877 108 aa10.92□□□□□ -0.66
USP47-207ENST00000527733 CLUHP3Q96NS8 147 aa10.92□□□□□ -0.66
USP47-207ENST00000527733 C15orf53Q8NAA6 179 aa10.92□□□□□ -0.66
USP47-207ENST00000527733 ZNF22P17026 224 aaPredicted RBP10.92□□□□□ -0.66
USP47-207ENST00000527733 UBE2BP63146 152 aa10.92□□□□□ -0.66
USP47-207ENST00000527733 RNASE8Q8TDE3 154 aaKnown RBP10.91□□□□□ -0.66
USP47-207ENST00000527733 UBE2D3P61077 147 aa10.91□□□□□ -0.66
USP47-207ENST00000527733 UBE2D2P62837 147 aa10.91□□□□□ -0.66
USP47-207ENST00000527733 FXYD2P54710 66 aa10.9□□□□□ -0.66
USP47-207ENST00000527733 BEAN1Q3B7T3 259 aa10.9□□□□□ -0.66
USP47-207ENST00000527733 A0A0J9YWU9 116 aa10.9□□□□□ -0.66
USP47-207ENST00000527733 MIR7-3HGQ8N6C7 128 aa10.9□□□□□ -0.66
USP47-207ENST00000527733 FREM2Q5SZK8 3169 aa10.9□□□□□ -0.66
USP47-207ENST00000527733 K7EP34 96 aa10.9□□□□□ -0.67
USP47-207ENST00000527733 TIRAPP58753 221 aa10.9□□□□□ -0.67
USP47-207ENST00000527733 LELP1Q5T871 98 aa10.89□□□□□ -0.67
USP47-207ENST00000527733 AGRNO00468 2067 aa10.89□□□□□ -0.67
USP47-207ENST00000527733 NPSP0C0P6 89 aa10.88□□□□□ -0.67
USP47-207ENST00000527733 RNF183Q96D59 192 aa10.88□□□□□ -0.67
USP47-207ENST00000527733 NANOS2P60321 138 aaKnown RBP10.87□□□□□ -0.67
USP47-207ENST00000527733 RETNQ9HD89 108 aa10.87□□□□□ -0.67
USP47-207ENST00000527733 INAFM2P0DMQ5 153 aa10.87□□□□□ -0.67
USP47-207ENST00000527733 MTURNQ8N3F0 131 aa10.87□□□□□ -0.67
USP47-207ENST00000527733 H3BMG7 143 aa10.87□□□□□ -0.67
USP47-207ENST00000527733 GAGE2BQ13066 116 aa10.87□□□□□ -0.67
USP47-207ENST00000527733 UBE2D4Q9Y2X8 147 aa10.87□□□□□ -0.67
USP47-207ENST00000527733 TMEM223A0PJW6 202 aa10.87□□□□□ -0.67
USP47-207ENST00000527733 HIGD2BQ4VC39 106 aa10.87□□□□□ -0.67
USP47-207ENST00000527733 MRPS36P82909 103 aaKnown RBP10.86□□□□□ -0.67
USP47-207ENST00000527733 A0A0J9YXY3 114 aa10.86□□□□□ -0.67
USP47-207ENST00000527733 F8W1H4 67 aa10.86□□□□□ -0.67
USP47-207ENST00000527733 NFE4Q86UQ8 179 aa10.86□□□□□ -0.67
USP47-207ENST00000527733 KRTAP24-1Q3LI83 254 aa10.85□□□□□ -0.67
USP47-207ENST00000527733 ETDBQ3ZM63 59 aa10.85□□□□□ -0.67
USP47-207ENST00000527733 C14orf177Q52M58 125 aa10.85□□□□□ -0.67
USP47-207ENST00000527733 TMEM126AQ9H061 195 aa10.85□□□□□ -0.67
USP47-207ENST00000527733 MIAQ16674 131 aa10.85□□□□□ -0.67
USP47-207ENST00000527733 CARD19Q96LW7 228 aa10.84□□□□□ -0.67
USP47-207ENST00000527733 H0YGX0 51 aa10.84□□□□□ -0.67
USP47-207ENST00000527733 LINC00310P59036 64 aa10.84□□□□□ -0.67
USP47-207ENST00000527733 PTH2Q96A98 100 aa10.84□□□□□ -0.67
USP47-207ENST00000527733 TNRC18O15417 2968 aaPredicted RBP10.84□□□□□ -0.67
USP47-207ENST00000527733 ETDCA0A1B0GVM5 59 aa10.83□□□□□ -0.68
USP47-207ENST00000527733 UFSP1Q6NVU6 142 aa10.83□□□□□ -0.68
USP47-207ENST00000527733 URB1-AS1Q96HZ7 61 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms