RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 DAPK1P53355 1430 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 NSD3Q9BZ95 1437 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 KIF20BQ96Q89 1820 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 A0A0G2JMZ2 1700 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 TRAV36DV7A0A075B6V5 113 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 FXYD6-FXYD2A0A087WZ82 144 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 A0A1B0GX51 115 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 J3KT08 172 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 APOC4-APOC2K7ER74 178 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 YPEL1O60688 119 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 E2F6O75461 281 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 DPM2O94777 84 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 PAEPP09466 180 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 SCTP09683 121 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 COX6B1P14854 86 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 RPS28P62857 69 aaKnown RBP-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 DCDP81605 110 aaKnown RBP-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 KLK9Q2XQG4 91 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 ZNF818PQ6ZRF7 136 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 VSTM2AQ8TAG5 236 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 SPRR2FQ96RM1 72 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 PCBD2Q9H0N5 130 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 ATPIF1Q9UII2 106 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 GCN1Q92616 2671 aaKnown RBP-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 HMGXB3Q12766 1538 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 NBEAQ8NFP9 2946 aa-0.54□□□□□ -2.5
CSDE1-210ENST00000525878 MYOM3Q5VTT5 1437 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 PRG4Q92954 1404 aaPredicted RBP-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 CHD1O14646 1710 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 ARHGEF10O15013 1369 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 TMEM2Q9UHN6 1383 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 TRBV20-1A0A075B6N2 111 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 BORCS7-ASMTA0A0B4J1R7 106 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 H0YJX3 145 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 TNFSF15O95150 251 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 RBP4P02753 201 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 G0S2P27469 103 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 GNG10P50151 68 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 TFAMQ00059 246 aaKnown RBP-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 TMEM128Q5BJH2 165 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 SPANXN1Q5VSR9 72 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 TMEM244Q5VVB8 128 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 SAMD13Q5VXD3 122 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 MIC13Q5XKP0 118 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 TRIQKQ629K1 86 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 OR8I2Q8N0Y5 310 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 AMELXQ99217 191 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 RIF1Q5UIP0 2472 aaKnown RBP-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 DYNC1H1Q14204 4646 aaKnown RBP-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 NBEAL2Q6ZNJ1 2754 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 RGPD3A6NKT7 1758 aaPredicted RBP-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 BCORQ6W2J9 1755 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 RGPD4Q7Z3J3 1758 aa-0.55□□□□□ -2.5
CSDE1-210ENST00000525878 SPAARA0A1B0GVQ0 90 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 E5RI56 91 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 NPFFO15130 113 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 PFDN1O60925 122 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 SMIM24O75264 130 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 PIRTP0C851 137 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 UBE2G1P62253 170 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 ALX1Q15699 326 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 PIGYQ3MUY2 71 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 MORN2Q502X0 79 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 PPP1R2P3Q6NXS1 205 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 TMEM35BQ8NCS4 154 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 DDA1Q9BW61 102 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 RPRMQ9NS64 109 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 CALML5Q9NZT1 146 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 HIGD1AQ9Y241 93 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 LINC00312Q9Y6C7 94 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 IFT140Q96RY7 1462 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 CUL7Q14999 1698 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 SHPRHQ149N8 1683 aa-0.56□□□□□ -2.5
CSDE1-210ENST00000525878 SRCAPQ6ZRS2 3230 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 DNAH17Q9UFH2 4485 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 DSPP15924 2871 aaKnown RBP-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 WDR87Q6ZQQ6 2873 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 UTP20O75691 2785 aaKnown RBP-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 FAM236AA0A1B0GUQ0 79 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 FAM236BA0A1B0GV22 79 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 A0A1B0GV72 72 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 FAM92AA1XBS5 289 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 M0R129 80 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 M0R135 149 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 IFNA17P01571 189 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 MT1AP04731 61 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 CCL8P80075 99 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 DEFB135Q30KP9 77 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 Q6AWC8 147 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 Q6JHZ5 121 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 Q6ZUT4 128 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 TCTE3Q8IZS6 198 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 DEFB105AQ8NG35 78 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 CDC26Q8NHZ8 85 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 SMIM4Q8WVI0 70 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 MAGOHBQ96A72 148 aaKnown RBP-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 CENPHQ9H3R5 247 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 NPVFQ9HCQ7 196 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 ZNF518AQ6AHZ1 1483 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 MAGI1Q96QZ7 1491 aaPredicted RBP-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms