RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 GNB1LQ9BYB4 327 aa7.42□□□□□ -1.22
TRAPPC4-204ENST00000524797 F5H697 171 aa7.42□□□□□ -1.22
TRAPPC4-204ENST00000524797 AMTP48728 403 aa7.42□□□□□ -1.22
TRAPPC4-204ENST00000524797 MTURNQ8N3F0 131 aa7.42□□□□□ -1.22
TRAPPC4-204ENST00000524797 Q8N976 141 aa7.42□□□□□ -1.22
TRAPPC4-204ENST00000524797 IGLV5-52A0A0A0MRZ9 124 aa7.41□□□□□ -1.22
TRAPPC4-204ENST00000524797 P01737 135 aa7.41□□□□□ -1.22
TRAPPC4-204ENST00000524797 SMIM17P0DL12 118 aa7.41□□□□□ -1.22
TRAPPC4-204ENST00000524797 XGP55808 180 aa7.41□□□□□ -1.22
TRAPPC4-204ENST00000524797 CACNG7P62955 275 aa7.41□□□□□ -1.22
TRAPPC4-204ENST00000524797 WFDC2Q14508 124 aa7.41□□□□□ -1.22
TRAPPC4-204ENST00000524797 PMCHL1Q16048 86 aa7.41□□□□□ -1.22
TRAPPC4-204ENST00000524797 CHCHD7Q9BUK0 85 aa7.41□□□□□ -1.22
TRAPPC4-204ENST00000524797 TPPP3Q9BW30 176 aa7.41□□□□□ -1.22
TRAPPC4-204ENST00000524797 BORCS7Q96B45 105 aa7.4□□□□□ -1.22
TRAPPC4-204ENST00000524797 KLK12Q9UKR0 248 aa7.4□□□□□ -1.22
TRAPPC4-204ENST00000524797 TRBV6-8A0A0A6YYG3 113 aa7.4□□□□□ -1.23
TRAPPC4-204ENST00000524797 MGPP08493 103 aa7.4□□□□□ -1.23
TRAPPC4-204ENST00000524797 HINT1P49773 126 aaPredicted RBP7.4□□□□□ -1.23
TRAPPC4-204ENST00000524797 OCC1Q8TAD7 63 aa7.4□□□□□ -1.23
TRAPPC4-204ENST00000524797 RMI2Q96E14 147 aa7.4□□□□□ -1.23
TRAPPC4-204ENST00000524797 DNAJC30Q96LL9 226 aa7.4□□□□□ -1.23
TRAPPC4-204ENST00000524797 A0A087WX48 190 aa7.39□□□□□ -1.23
TRAPPC4-204ENST00000524797 PMCHP20382 165 aa7.39□□□□□ -1.23
TRAPPC4-204ENST00000524797 LYZL1Q6UWQ5 148 aa7.39□□□□□ -1.23
TRAPPC4-204ENST00000524797 NAT8BQ9UHF3 227 aa7.39□□□□□ -1.23
TRAPPC4-204ENST00000524797 F2Z2F3 143 aa7.39□□□□□ -1.23
TRAPPC4-204ENST00000524797 C3orf79P0CE67 100 aa7.39□□□□□ -1.23
TRAPPC4-204ENST00000524797 SUMO4Q6EEV6 95 aa7.39□□□□□ -1.23
TRAPPC4-204ENST00000524797 PET117Q6UWS5 81 aa7.39□□□□□ -1.23
TRAPPC4-204ENST00000524797 IGKV2D-24A0A075B6R9 120 aa7.38□□□□□ -1.23
TRAPPC4-204ENST00000524797 TMEM262E9PQX1 116 aa7.38□□□□□ -1.23
TRAPPC4-204ENST00000524797 K7EN84 100 aa7.38□□□□□ -1.23
TRAPPC4-204ENST00000524797 LECT2O14960 151 aa7.38□□□□□ -1.23
TRAPPC4-204ENST00000524797 VAMP3Q15836 100 aa7.38□□□□□ -1.23
TRAPPC4-204ENST00000524797 TMEM97Q5BJF2 176 aa7.38□□□□□ -1.23
TRAPPC4-204ENST00000524797 NTM-AS1Q6ZSK4 140 aa7.38□□□□□ -1.23
TRAPPC4-204ENST00000524797 BAALCQ8WXS3 180 aa7.38□□□□□ -1.23
TRAPPC4-204ENST00000524797 UBE2WQ96B02 151 aa7.38□□□□□ -1.23
TRAPPC4-204ENST00000524797 M0QY20 66 aa7.37□□□□□ -1.23
TRAPPC4-204ENST00000524797 HLA-DQA1P01909 254 aa7.37□□□□□ -1.23
TRAPPC4-204ENST00000524797 TMEM70Q9BUB7 260 aa7.37□□□□□ -1.23
TRAPPC4-204ENST00000524797 RNASE7Q9H1E1 156 aaKnown RBP7.37□□□□□ -1.23
TRAPPC4-204ENST00000524797 RPP21Q9H633 154 aaKnown RBP7.37□□□□□ -1.23
TRAPPC4-204ENST00000524797 DNAH8Q96JB1 4490 aa7.37□□□□□ -1.23
TRAPPC4-204ENST00000524797 H7C1H1 209 aa7.37□□□□□ -1.23
TRAPPC4-204ENST00000524797 MPV17L2Q567V2 206 aa7.37□□□□□ -1.23
TRAPPC4-204ENST00000524797 CHCHD5Q9BSY4 110 aa7.37□□□□□ -1.23
TRAPPC4-204ENST00000524797 DPH3P1Q9H4G8 78 aa7.37□□□□□ -1.23
TRAPPC4-204ENST00000524797 EPM2AB3EWF7 344 aa7.36□□□□□ -1.23
TRAPPC4-204ENST00000524797 ENHOQ6UWT2 76 aa7.36□□□□□ -1.23
TRAPPC4-204ENST00000524797 TMEM136Q6ZRR5 245 aa7.36□□□□□ -1.23
TRAPPC4-204ENST00000524797 NTF3P20783 257 aa7.35□□□□□ -1.23
TRAPPC4-204ENST00000524797 RASL11AQ6T310 242 aa7.35□□□□□ -1.23
TRAPPC4-204ENST00000524797 TSKUQ8WUA8 353 aa7.35□□□□□ -1.23
TRAPPC4-204ENST00000524797 CNFNQ9BYD5 112 aa7.35□□□□□ -1.23
TRAPPC4-204ENST00000524797 V9GYV3 84 aa7.35□□□□□ -1.23
TRAPPC4-204ENST00000524797 VPS13BQ7Z7G8 4022 aa7.35□□□□□ -1.23
TRAPPC4-204ENST00000524797 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC4-204ENST00000524797 HAMPP81172 84 aa7.35□□□□□ -1.23
TRAPPC4-204ENST00000524797 GAGE6Q13070 117 aa7.35□□□□□ -1.23
TRAPPC4-204ENST00000524797 Q6ZVH6 145 aa7.35□□□□□ -1.23
TRAPPC4-204ENST00000524797 TRBV25-1A0A075B6N4 114 aa7.34□□□□□ -1.23
TRAPPC4-204ENST00000524797 IGHV1-24A0A0C4DH33 117 aa7.34□□□□□ -1.23
TRAPPC4-204ENST00000524797 CRPP02741 224 aa7.34□□□□□ -1.23
TRAPPC4-204ENST00000524797 APCSP02743 223 aa7.34□□□□□ -1.23
TRAPPC4-204ENST00000524797 ANGP03950 147 aaKnown RBP7.34□□□□□ -1.23
TRAPPC4-204ENST00000524797 TWIST1Q15672 202 aa7.34□□□□□ -1.23
TRAPPC4-204ENST00000524797 C1orf43Q9BWL3 253 aa7.34□□□□□ -1.23
TRAPPC4-204ENST00000524797 OSTCQ9NRP0 149 aa7.34□□□□□ -1.23
TRAPPC4-204ENST00000524797 FAM30AQ9NZY2 134 aa7.34□□□□□ -1.23
TRAPPC4-204ENST00000524797 A4D1N5 150 aa7.33□□□□□ -1.24
TRAPPC4-204ENST00000524797 TSPAN13O95857 204 aa7.33□□□□□ -1.24
TRAPPC4-204ENST00000524797 KIAA1644Q3SXP7 199 aa7.33□□□□□ -1.24
TRAPPC4-204ENST00000524797 Q5VSD8 79 aa7.33□□□□□ -1.24
TRAPPC4-204ENST00000524797 FAM231DQ6ZW35 169 aa7.33□□□□□ -1.24
TRAPPC4-204ENST00000524797 ATOH7Q8N100 152 aa7.33□□□□□ -1.24
TRAPPC4-204ENST00000524797 GTSF1Q8WW33 167 aa7.33□□□□□ -1.24
TRAPPC4-204ENST00000524797 HSBP1O75506 76 aa7.33□□□□□ -1.24
TRAPPC4-204ENST00000524797 SMR3BP02814 79 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC4-204ENST00000524797 FAM19A2Q8N3H0 131 aa7.33□□□□□ -1.24
TRAPPC4-204ENST00000524797 A0A1B0GW15 77 aa7.32□□□□□ -1.24
TRAPPC4-204ENST00000524797 CKS1BP61024 79 aa7.32□□□□□ -1.24
TRAPPC4-204ENST00000524797 HERV-K104P63124 156 aa7.32□□□□□ -1.24
TRAPPC4-204ENST00000524797 MIAQ16674 131 aa7.32□□□□□ -1.24
TRAPPC4-204ENST00000524797 ST20Q9HBF5 79 aa7.32□□□□□ -1.24
TRAPPC4-204ENST00000524797 SMIM27A0A1W2PRY6 76 aa7.31□□□□□ -1.24
TRAPPC4-204ENST00000524797 Q6ZSA8 131 aa7.31□□□□□ -1.24
TRAPPC4-204ENST00000524797 GATD1Q8NB37 220 aa7.31□□□□□ -1.24
TRAPPC4-204ENST00000524797 C18orf32Q8TCD1 76 aa7.31□□□□□ -1.24
TRAPPC4-204ENST00000524797 PGLYRP4Q96LB8 373 aa7.31□□□□□ -1.24
TRAPPC4-204ENST00000524797 TMEM243Q9BU79 118 aa7.31□□□□□ -1.24
TRAPPC4-204ENST00000524797 PRR34Q9NV39 138 aa7.31□□□□□ -1.24
TRAPPC4-204ENST00000524797 A8MWL6 223 aa7.31□□□□□ -1.24
TRAPPC4-204ENST00000524797 TAX1BP3O14907 124 aa7.31□□□□□ -1.24
TRAPPC4-204ENST00000524797 C14orf177Q52M58 125 aa7.31□□□□□ -1.24
TRAPPC4-204ENST00000524797 CT83Q5H943 113 aa7.31□□□□□ -1.24
TRAPPC4-204ENST00000524797 MRPL54Q6P161 138 aaKnown RBP7.31□□□□□ -1.24
TRAPPC4-204ENST00000524797 CLPSL2Q6UWE3 100 aa7.31□□□□□ -1.24
TRAPPC4-204ENST00000524797 TRAV26-2A0A0B4J265 109 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms