RNA–Protein interactions for RNA: ENST00000522262.1

CDH12-208, Transcript of cadherin 12, humanhuman

TSL 2 BASIC

Gene CDH12, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-208ENST00000522262 TMEM136Q6ZRR5 245 aa4.53□□□□□ -1.68
CDH12-208ENST00000522262 ATP5L2Q7Z4Y8 100 aa4.53□□□□□ -1.68
CDH12-208ENST00000522262 IMMP2LQ96T52 175 aa4.53□□□□□ -1.68
CDH12-208ENST00000522262 TRBV6-8A0A0A6YYG3 113 aa4.53□□□□□ -1.68
CDH12-208ENST00000522262 SMAGPQ0VAQ4 97 aa4.53□□□□□ -1.68
CDH12-208ENST00000522262 Q6ZRN7 208 aaPredicted RBP4.53□□□□□ -1.68
CDH12-208ENST00000522262 BTF3L4Q96K17 158 aa4.53□□□□□ -1.68
CDH12-208ENST00000522262 TRBV6-5A0A0K0K1A5 114 aa4.52□□□□□ -1.69
CDH12-208ENST00000522262 D6R8Y8 96 aa4.52□□□□□ -1.69
CDH12-208ENST00000522262 NPYP01303 97 aa4.52□□□□□ -1.69
CDH12-208ENST00000522262 POLR2KP53803 58 aaKnown RBP4.52□□□□□ -1.69
CDH12-208ENST00000522262 BORCS7Q96B45 105 aa4.52□□□□□ -1.69
CDH12-208ENST00000522262 CSDC2Q9Y534 153 aaKnown RBP4.52□□□□□ -1.69
CDH12-208ENST00000522262 SDHAF1A6NFY7 115 aa4.52□□□□□ -1.69
CDH12-208ENST00000522262 TSPAN13O95857 204 aa4.52□□□□□ -1.69
CDH12-208ENST00000522262 OR10J3Q5JRS4 329 aa4.52□□□□□ -1.69
CDH12-208ENST00000522262 SH2D6Q7Z4S9 175 aa4.52□□□□□ -1.69
CDH12-208ENST00000522262 DAZ4Q86SG3 579 aaKnown RBP4.52□□□□□ -1.69
CDH12-208ENST00000522262 NIT1Q86X76 327 aa4.52□□□□□ -1.69
CDH12-208ENST00000522262 TMEM70Q9BUB7 260 aa4.52□□□□□ -1.69
CDH12-208ENST00000522262 CST9LQ9H4G1 147 aa4.52□□□□□ -1.69
CDH12-208ENST00000522262 DAZ3Q9NR90 486 aaKnown RBP4.52□□□□□ -1.69
CDH12-208ENST00000522262 TSHBP01222 138 aa4.51□□□□□ -1.69
CDH12-208ENST00000522262 IGHV3-30P01768 117 aa4.51□□□□□ -1.69
CDH12-208ENST00000522262 IGHV3-33P01772 117 aa4.51□□□□□ -1.69
CDH12-208ENST00000522262 IGHV3-30-3P0DP02 117 aa4.51□□□□□ -1.69
CDH12-208ENST00000522262 IGHV3-30-5P0DP03 117 aa4.51□□□□□ -1.69
CDH12-208ENST00000522262 MPV17L2Q567V2 206 aa4.51□□□□□ -1.69
CDH12-208ENST00000522262 LINC01556Q5JQF7 62 aa4.51□□□□□ -1.69
CDH12-208ENST00000522262 MRAP2Q96G30 205 aa4.51□□□□□ -1.69
CDH12-208ENST00000522262 MAP1LC3CQ9BXW4 147 aa4.51□□□□□ -1.69
CDH12-208ENST00000522262 Q8N976 141 aa4.51□□□□□ -1.69
CDH12-208ENST00000522262 CHCHD7Q9BUK0 85 aa4.51□□□□□ -1.69
CDH12-208ENST00000522262 H7C1H1 209 aa4.51□□□□□ -1.69
CDH12-208ENST00000522262 TRAPPC1Q9Y5R8 145 aa4.51□□□□□ -1.69
CDH12-208ENST00000522262 FAT1Q14517 4588 aa4.5□□□□□ -1.69
CDH12-208ENST00000522262 TRBV27A0A0K0K1C4 114 aa4.5□□□□□ -1.69
CDH12-208ENST00000522262 ESDP10768 282 aa4.5□□□□□ -1.69
CDH12-208ENST00000522262 KIAA1644Q3SXP7 199 aa4.5□□□□□ -1.69
CDH12-208ENST00000522262 HERC2O95714 4834 aa4.49□□□□□ -1.69
CDH12-208ENST00000522262 IGLV4-60A0A075B6I1 120 aa4.49□□□□□ -1.69
CDH12-208ENST00000522262 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.49□□□□□ -1.69
CDH12-208ENST00000522262 A0A1B0GVY2 172 aa4.49□□□□□ -1.69
CDH12-208ENST00000522262 IGKV2-29A2NJV5 120 aaPredicted RBP4.49□□□□□ -1.69
CDH12-208ENST00000522262 CKS2P33552 79 aa4.49□□□□□ -1.69
CDH12-208ENST00000522262 SUMO2P61956 95 aaKnown RBP4.49□□□□□ -1.69
CDH12-208ENST00000522262 GAGE6Q13070 117 aa4.49□□□□□ -1.69
CDH12-208ENST00000522262 FAM104AQ969W3 186 aa4.49□□□□□ -1.69
CDH12-208ENST00000522262 TRAV9-1A0A075B6T8 112 aa4.49□□□□□ -1.69
CDH12-208ENST00000522262 TNP2Q05952 138 aa4.49□□□□□ -1.69
CDH12-208ENST00000522262 MAPKAPK5-AS1Q8N8E1 139 aa4.49□□□□□ -1.69
CDH12-208ENST00000522262 C20orf203Q8NBC4 194 aa4.49□□□□□ -1.69
CDH12-208ENST00000522262 TRAV8-6A0A0B4J262 113 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 IBA57-AS1B1ANH7 110 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 B5MCH6 92 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 ENHOQ6UWT2 76 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 C6orf223Q8N319 242 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 ST20Q9HBF5 79 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 TRBV25-1A0A075B6N4 114 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 IGHV1-24A0A0C4DH33 117 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 I3L3M4 83 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 ORMDL3Q8N138 153 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 WFDC2Q14508 124 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 C1orf134Q5TEV5 83 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 PRELID3AQ96N28 172 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 CHCHD5Q9BSY4 110 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 SMIM2Q9BVW6 85 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 GNB1LQ9BYB4 327 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 KLK12Q9UKR0 248 aa4.48□□□□□ -1.69
CDH12-208ENST00000522262 FUSP35637 526 aaKnown RBP eCLIP4.47□□□□□ -1.69
CDH12-208ENST00000522262 UBE2V1Q13404 147 aa4.47□□□□□ -1.69
CDH12-208ENST00000522262 CLPSL2Q6UWE3 100 aa4.47□□□□□ -1.69
CDH12-208ENST00000522262 MRPL52Q86TS9 123 aaKnown RBP4.47□□□□□ -1.69
CDH12-208ENST00000522262 BAALCQ8WXS3 180 aa4.47□□□□□ -1.69
CDH12-208ENST00000522262 AMTP48728 403 aa4.47□□□□□ -1.69
CDH12-208ENST00000522262 RPL39P62891 51 aaKnown RBP4.47□□□□□ -1.69
CDH12-208ENST00000522262 TTC32Q5I0X7 151 aa4.47□□□□□ -1.69
CDH12-208ENST00000522262 KRTAP26-1Q6PEX3 210 aa4.47□□□□□ -1.69
CDH12-208ENST00000522262 URB1-AS1Q96HZ7 61 aa4.47□□□□□ -1.69
CDH12-208ENST00000522262 C20orf78Q9BR46 151 aa4.47□□□□□ -1.69
CDH12-208ENST00000522262 TMEM243Q9BU79 118 aa4.47□□□□□ -1.69
CDH12-208ENST00000522262 MRPL18Q9H0U6 180 aaKnown RBP4.47□□□□□ -1.69
CDH12-208ENST00000522262 Q9HAA7 133 aa4.47□□□□□ -1.69
CDH12-208ENST00000522262 LOC389332A0A1B0GUA5 103 aa4.46□□□□□ -1.69
CDH12-208ENST00000522262 TMEM262E9PQX1 116 aa4.46□□□□□ -1.69
CDH12-208ENST00000522262 APCSP02743 223 aa4.46□□□□□ -1.69
CDH12-208ENST00000522262 PRR34Q9NV39 138 aa4.46□□□□□ -1.69
CDH12-208ENST00000522262 NUPR1O60356 82 aa4.46□□□□□ -1.7
CDH12-208ENST00000522262 HLA-DQA1P01909 254 aa4.46□□□□□ -1.7
CDH12-208ENST00000522262 LINC00269Q8N2A0 174 aa4.46□□□□□ -1.7
CDH12-208ENST00000522262 MIEN1Q9BRT3 115 aa4.46□□□□□ -1.7
CDH12-208ENST00000522262 VCYO14598 125 aa4.46□□□□□ -1.7
CDH12-208ENST00000522262 IFI27P40305 119 aaPredicted RBP4.46□□□□□ -1.7
CDH12-208ENST00000522262 BAGE3Q86Y29 109 aa4.46□□□□□ -1.7
CDH12-208ENST00000522262 VAMP8Q9BV40 100 aa4.46□□□□□ -1.7
CDH12-208ENST00000522262 A0A087WX48 190 aa4.45□□□□□ -1.7
CDH12-208ENST00000522262 A0A1B0GUV1 79 aa4.45□□□□□ -1.7
CDH12-208ENST00000522262 LRCOL1A6NCL2 159 aa4.45□□□□□ -1.7
CDH12-208ENST00000522262 PRSS29PA6NIE9 313 aa4.45□□□□□ -1.7
CDH12-208ENST00000522262 K7ERU9 68 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms