RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 UBE2D3P61077 147 aa10.49□□□□□ -0.73
SREK1-209ENST00000520953 UBE2D2P62837 147 aa10.49□□□□□ -0.73
SREK1-209ENST00000520953 CYSLTR1Q9Y271 337 aa10.49□□□□□ -0.73
SREK1-209ENST00000520953 TRBV10-1A0A0K0K1A3 114 aa10.49□□□□□ -0.73
SREK1-209ENST00000520953 TSHBP01222 138 aa10.49□□□□□ -0.73
SREK1-209ENST00000520953 LINC00694P0DN24 101 aa10.49□□□□□ -0.73
SREK1-209ENST00000520953 PRADC1Q9BSG0 188 aa10.49□□□□□ -0.73
SREK1-209ENST00000520953 TTTY13Q9BZ97 58 aa10.49□□□□□ -0.73
SREK1-209ENST00000520953 CHTOPQ9Y3Y2 248 aaKnown RBP10.49□□□□□ -0.73
SREK1-209ENST00000520953 DEFB131BA0A096LNP1 70 aa10.48□□□□□ -0.73
SREK1-209ENST00000520953 RPL36AP83881 106 aaKnown RBP10.48□□□□□ -0.73
SREK1-209ENST00000520953 RPL36ALQ969Q0 106 aaKnown RBP10.48□□□□□ -0.73
SREK1-209ENST00000520953 SIVA1O15304 175 aa10.48□□□□□ -0.73
SREK1-209ENST00000520953 RPL39P62891 51 aaKnown RBP10.48□□□□□ -0.73
SREK1-209ENST00000520953 DNAJC30Q96LL9 226 aa10.48□□□□□ -0.73
SREK1-209ENST00000520953 LYSTQ99698 3801 aa10.48□□□□□ -0.73
SREK1-209ENST00000520953 IGIPA6NJ69 53 aa10.47□□□□□ -0.73
SREK1-209ENST00000520953 TMEM97Q5BJF2 176 aa10.47□□□□□ -0.73
SREK1-209ENST00000520953 PLECQ15149 4684 aaKnown RBP10.47□□□□□ -0.73
SREK1-209ENST00000520953 STARD9Q9P2P6 4700 aa10.47□□□□□ -0.73
SREK1-209ENST00000520953 PRSS29PA6NIE9 313 aa10.46□□□□□ -0.73
SREK1-209ENST00000520953 I3L3M4 83 aa10.46□□□□□ -0.73
SREK1-209ENST00000520953 COX11Q9Y6N1 276 aa10.46□□□□□ -0.73
SREK1-209ENST00000520953 NTM-AS1Q6ZSK4 140 aa10.46□□□□□ -0.74
SREK1-209ENST00000520953 TENM2Q9NT68 2774 aa10.45□□□□□ -0.74
SREK1-209ENST00000520953 NPSP0C0P6 89 aa10.45□□□□□ -0.74
SREK1-209ENST00000520953 LINC01549A6NIU2 74 aa10.45□□□□□ -0.74
SREK1-209ENST00000520953 TAX1BP3O14907 124 aa10.45□□□□□ -0.74
SREK1-209ENST00000520953 ORAOV1Q8WV07 137 aa10.45□□□□□ -0.74
SREK1-209ENST00000520953 HSD52Q0P140 79 aa10.43□□□□□ -0.74
SREK1-209ENST00000520953 TMEM141Q96I45 108 aa10.43□□□□□ -0.74
SREK1-209ENST00000520953 TIMM17AQ99595 171 aa10.43□□□□□ -0.74
SREK1-209ENST00000520953 TRAV10A0A0B4J240 114 aa10.43□□□□□ -0.74
SREK1-209ENST00000520953 MAPKAPK5-AS1Q8N8E1 139 aa10.43□□□□□ -0.74
SREK1-209ENST00000520953 ATP6V0E2Q8NHE4 81 aa10.42□□□□□ -0.74
SREK1-209ENST00000520953 CHCHD7Q9BUK0 85 aa10.42□□□□□ -0.74
SREK1-209ENST00000520953 HIGD1BQ9P298 99 aa10.42□□□□□ -0.74
SREK1-209ENST00000520953 IGLV4-69A0A075B6H9 119 aa10.42□□□□□ -0.74
SREK1-209ENST00000520953 TRBV25-1A0A075B6N4 114 aa10.42□□□□□ -0.74
SREK1-209ENST00000520953 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.42□□□□□ -0.74
SREK1-209ENST00000520953 TRAV8-6A0A0B4J262 113 aa10.42□□□□□ -0.74
SREK1-209ENST00000520953 IGKV2-29A2NJV5 120 aaPredicted RBP10.42□□□□□ -0.74
SREK1-209ENST00000520953 SEC11AP67812 179 aa10.42□□□□□ -0.74
SREK1-209ENST00000520953 PMVKQ15126 192 aa10.42□□□□□ -0.74
SREK1-209ENST00000520953 DAZ4Q86SG3 579 aaKnown RBP10.42□□□□□ -0.74
SREK1-209ENST00000520953 DAZ3Q9NR90 486 aaKnown RBP10.42□□□□□ -0.74
SREK1-209ENST00000520953 COTL1Q14019 142 aa10.41□□□□□ -0.74
SREK1-209ENST00000520953 CST9LQ9H4G1 147 aa10.41□□□□□ -0.74
SREK1-209ENST00000520953 C20orf203Q8NBC4 194 aa10.41□□□□□ -0.74
SREK1-209ENST00000520953 CHAC1Q9BUX1 264 aa10.41□□□□□ -0.74
SREK1-209ENST00000520953 ICOSQ9Y6W8 199 aa10.41□□□□□ -0.74
SREK1-209ENST00000520953 CEMP1Q6PRD7 247 aaPredicted RBP10.4□□□□□ -0.74
SREK1-209ENST00000520953 C11orf86A6NJI1 115 aa10.39□□□□□ -0.75
SREK1-209ENST00000520953 OPRPNQ99935 248 aaPredicted RBP10.39□□□□□ -0.75
SREK1-209ENST00000520953 IGLL5B9A064 214 aa10.39□□□□□ -0.75
SREK1-209ENST00000520953 MRPL23Q16540 153 aaKnown RBP10.39□□□□□ -0.75
SREK1-209ENST00000520953 E9PLD3 99 aa10.38□□□□□ -0.75
SREK1-209ENST00000520953 TRBV6-8A0A0A6YYG3 113 aa10.38□□□□□ -0.75
SREK1-209ENST00000520953 GTSF1LQ9H1H1 148 aa10.38□□□□□ -0.75
SREK1-209ENST00000520953 Q8N3U1 123 aa10.37□□□□□ -0.75
SREK1-209ENST00000520953 A6NDN8 102 aa10.36□□□□□ -0.75
SREK1-209ENST00000520953 H3BNG1 76 aa10.36□□□□□ -0.75
SREK1-209ENST00000520953 CCL25O15444 150 aa10.36□□□□□ -0.75
SREK1-209ENST00000520953 PAPPA-AS1Q5QFB9 102 aa10.36□□□□□ -0.75
SREK1-209ENST00000520953 LYPD5Q6UWN5 251 aa10.36□□□□□ -0.75
SREK1-209ENST00000520953 FAM104AQ969W3 186 aa10.36□□□□□ -0.75
SREK1-209ENST00000520953 DNAH1Q9P2D7 4330 aa10.35□□□□□ -0.75
SREK1-209ENST00000520953 IGLV4-3A0A075B6K6 122 aa10.35□□□□□ -0.75
SREK1-209ENST00000520953 MYMXA0A1B0GTQ4 84 aa10.35□□□□□ -0.75
SREK1-209ENST00000520953 K7EP13 123 aa10.35□□□□□ -0.75
SREK1-209ENST00000520953 GCSHP23434 173 aa10.35□□□□□ -0.75
SREK1-209ENST00000520953 FXYD2P54710 66 aa10.35□□□□□ -0.75
SREK1-209ENST00000520953 GAGE6Q13070 117 aa10.35□□□□□ -0.75
SREK1-209ENST00000520953 UBE2V1Q13404 147 aa10.35□□□□□ -0.75
SREK1-209ENST00000520953 ESRGQ1W209 222 aa10.35□□□□□ -0.75
SREK1-209ENST00000520953 VAMP3Q15836 100 aa10.35□□□□□ -0.75
SREK1-209ENST00000520953 RNASE13Q5GAN3 156 aaKnown RBP10.35□□□□□ -0.75
SREK1-209ENST00000520953 ZFAND6Q6FIF0 208 aa10.34□□□□□ -0.75
SREK1-209ENST00000520953 TMEM243Q9BU79 118 aa10.34□□□□□ -0.75
SREK1-209ENST00000520953 H3BRM9 83 aa10.33□□□□□ -0.76
SREK1-209ENST00000520953 PTTG1IPP53801 180 aa10.33□□□□□ -0.76
SREK1-209ENST00000520953 CHCHD5Q9BSY4 110 aa10.33□□□□□ -0.76
SREK1-209ENST00000520953 UBE2D4Q9Y2X8 147 aa10.33□□□□□ -0.76
SREK1-209ENST00000520953 NFE4Q86UQ8 179 aa10.33□□□□□ -0.76
SREK1-209ENST00000520953 CEND1Q8N111 149 aa10.33□□□□□ -0.76
SREK1-209ENST00000520953 PYGO1Q9Y3Y4 419 aa10.33□□□□□ -0.76
SREK1-209ENST00000520953 TMEM170BQ5T4T1 132 aa10.32□□□□□ -0.76
SREK1-209ENST00000520953 TM2D2Q9BX73 214 aa10.32□□□□□ -0.76
SREK1-209ENST00000520953 HERVK_113P61574 105 aa10.32□□□□□ -0.76
SREK1-209ENST00000520953 AMMECR1LQ6DCA0 310 aa10.32□□□□□ -0.76
SREK1-209ENST00000520953 C9orf118A6NHY6 69 aa10.31□□□□□ -0.76
SREK1-209ENST00000520953 ZNF815PA8K554 130 aa10.31□□□□□ -0.76
SREK1-209ENST00000520953 VCX2Q9H322 139 aa10.31□□□□□ -0.76
SREK1-209ENST00000520953 TAL2Q16559 108 aa10.31□□□□□ -0.76
SREK1-209ENST00000520953 Q6ZUT4 128 aa10.31□□□□□ -0.76
SREK1-209ENST00000520953 RAB37Q96AX2 223 aa10.31□□□□□ -0.76
SREK1-209ENST00000520953 IGLV4-60A0A075B6I1 120 aa10.3□□□□□ -0.76
SREK1-209ENST00000520953 TSPEAR-AS2P59090 65 aa10.3□□□□□ -0.76
SREK1-209ENST00000520953 LELP1Q5T871 98 aa10.3□□□□□ -0.76
SREK1-209ENST00000520953 WFDC10BQ8IUB3 73 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms