RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 TWIST1Q15672 202 aa5.29□□□□□ -1.56
PVT1-207ENST00000518528 GATD1Q8NB37 220 aa5.29□□□□□ -1.56
PVT1-207ENST00000518528 MRAP2Q96G30 205 aa5.29□□□□□ -1.56
PVT1-207ENST00000518528 OPRPNQ99935 248 aaPredicted RBP5.29□□□□□ -1.56
PVT1-207ENST00000518528 SDHAF1A6NFY7 115 aa5.28□□□□□ -1.56
PVT1-207ENST00000518528 UPK1BO75841 260 aa5.28□□□□□ -1.56
PVT1-207ENST00000518528 RPL35P42766 123 aaKnown RBP5.28□□□□□ -1.56
PVT1-207ENST00000518528 SPAG11BQ08648 103 aa5.28□□□□□ -1.56
PVT1-207ENST00000518528 LYZL1Q6UWQ5 148 aa5.28□□□□□ -1.56
PVT1-207ENST00000518528 LINC00299Q6ZSB3 139 aa5.28□□□□□ -1.56
PVT1-207ENST00000518528 FAM19A5Q7Z5A7 132 aaPredicted RBP5.28□□□□□ -1.56
PVT1-207ENST00000518528 BIN3Q9NQY0 253 aa5.28□□□□□ -1.56
PVT1-207ENST00000518528 G3V3Q6 166 aa5.27□□□□□ -1.57
PVT1-207ENST00000518528 DEFA1P59665 94 aa5.27□□□□□ -1.57
PVT1-207ENST00000518528 MRPL52Q86TS9 123 aaKnown RBP5.27□□□□□ -1.57
PVT1-207ENST00000518528 TYMSOSQ8TAI1 123 aa5.27□□□□□ -1.57
PVT1-207ENST00000518528 SFT2D1Q8WV19 159 aa5.27□□□□□ -1.57
PVT1-207ENST00000518528 CDC42SE2Q9NRR3 84 aa5.27□□□□□ -1.57
PVT1-207ENST00000518528 MRPL35Q9NZE8 188 aaKnown RBP5.27□□□□□ -1.57
PVT1-207ENST00000518528 NDUFA13Q9P0J0 144 aa5.27□□□□□ -1.57
PVT1-207ENST00000518528 M0QXV9 152 aa5.26□□□□□ -1.57
PVT1-207ENST00000518528 ZNF861PO60384 105 aa5.26□□□□□ -1.57
PVT1-207ENST00000518528 CRYGAP11844 174 aa5.26□□□□□ -1.57
PVT1-207ENST00000518528 TPRXLQ17RH7 258 aa5.26□□□□□ -1.57
PVT1-207ENST00000518528 TMEM241Q24JQ0 296 aa5.26□□□□□ -1.57
PVT1-207ENST00000518528 C9orf62Q8N4C0 152 aa5.26□□□□□ -1.57
PVT1-207ENST00000518528 KCNRGQ8N5I3 272 aa5.26□□□□□ -1.57
PVT1-207ENST00000518528 OR10D4PQ8NGN7 298 aa5.26□□□□□ -1.57
PVT1-207ENST00000518528 RPL39LQ96EH5 51 aaKnown RBP5.26□□□□□ -1.57
PVT1-207ENST00000518528 ALG5Q9Y673 324 aa5.26□□□□□ -1.57
PVT1-207ENST00000518528 FXYD6-FXYD2A0A087WZ82 144 aa5.25□□□□□ -1.57
PVT1-207ENST00000518528 FAM168BA1KXE4 195 aa5.25□□□□□ -1.57
PVT1-207ENST00000518528 NDUFA1O15239 70 aa5.25□□□□□ -1.57
PVT1-207ENST00000518528 CTRLP40313 264 aa5.25□□□□□ -1.57
PVT1-207ENST00000518528 GAGE2EQ4V326 116 aa5.25□□□□□ -1.57
PVT1-207ENST00000518528 CENPWQ5EE01 88 aa5.25□□□□□ -1.57
PVT1-207ENST00000518528 C5orf38Q86SI9 138 aa5.25□□□□□ -1.57
PVT1-207ENST00000518528 KRTAP11-1Q8IUC1 163 aa5.25□□□□□ -1.57
PVT1-207ENST00000518528 SMIM12Q96EX1 92 aa5.25□□□□□ -1.57
PVT1-207ENST00000518528 RPP21Q9H633 154 aaKnown RBP5.25□□□□□ -1.57
PVT1-207ENST00000518528 GAGE2DQ9UEU5 116 aa5.25□□□□□ -1.57
PVT1-207ENST00000518528 IGLV7-46A0A075B6I9 117 aa5.24□□□□□ -1.57
PVT1-207ENST00000518528 TRAV13-1A0A0B4J241 112 aa5.24□□□□□ -1.57
PVT1-207ENST00000518528 A0A1B0GV50 99 aa5.24□□□□□ -1.57
PVT1-207ENST00000518528 C7orf77A4D0Y5 90 aa5.24□□□□□ -1.57
PVT1-207ENST00000518528 TLX1NBP0CAT3 122 aa5.24□□□□□ -1.57
PVT1-207ENST00000518528 GNG4P50150 75 aa5.24□□□□□ -1.57
PVT1-207ENST00000518528 FAM213BQ8TBF2 198 aa5.24□□□□□ -1.57
PVT1-207ENST00000518528 CNFNQ9BYD5 112 aa5.24□□□□□ -1.57
PVT1-207ENST00000518528 ST20Q9HBF5 79 aa5.24□□□□□ -1.57
PVT1-207ENST00000518528 TMEM242Q9NWH2 141 aa5.24□□□□□ -1.57
PVT1-207ENST00000518528 FSIP2Q5CZC0 6907 aa5.24□□□□□ -1.57
PVT1-207ENST00000518528 TRBV6-5A0A0K0K1A5 114 aa5.23□□□□□ -1.57
PVT1-207ENST00000518528 UMAD1C9J7I0 102 aa5.23□□□□□ -1.57
PVT1-207ENST00000518528 NUPR1O60356 82 aa5.23□□□□□ -1.57
PVT1-207ENST00000518528 TSHBP01222 138 aa5.23□□□□□ -1.57
PVT1-207ENST00000518528 ORAOV1Q8WV07 137 aa5.23□□□□□ -1.57
PVT1-207ENST00000518528 MBD3L1Q8WWY6 194 aa5.23□□□□□ -1.57
PVT1-207ENST00000518528 GIPP09681 153 aaPredicted RBP5.22□□□□□ -1.57
PVT1-207ENST00000518528 FCER1GP30273 86 aa5.22□□□□□ -1.57
PVT1-207ENST00000518528 RPL28P46779 137 aaKnown RBP5.22□□□□□ -1.57
PVT1-207ENST00000518528 LINC00173Q6ZV60 143 aa5.22□□□□□ -1.57
PVT1-207ENST00000518528 C11orf52Q96A22 123 aa5.22□□□□□ -1.57
PVT1-207ENST00000518528 RETNLBQ9BQ08 111 aa5.22□□□□□ -1.57
PVT1-207ENST00000518528 SMDT1Q9H4I9 107 aa5.22□□□□□ -1.57
PVT1-207ENST00000518528 MANBALQ9NQG1 85 aa5.22□□□□□ -1.57
PVT1-207ENST00000518528 CSDC2Q9Y534 153 aaKnown RBP5.22□□□□□ -1.57
PVT1-207ENST00000518528 H2AFB1P0C5Y9 115 aa5.21□□□□□ -1.58
PVT1-207ENST00000518528 CCL20P78556 96 aa5.21□□□□□ -1.58
PVT1-207ENST00000518528 SRSF3P84103 164 aaKnown RBP5.21□□□□□ -1.58
PVT1-207ENST00000518528 IFITM3Q01628 133 aa5.21□□□□□ -1.58
PVT1-207ENST00000518528 LBHQ53QV2 105 aaPredicted RBP5.21□□□□□ -1.58
PVT1-207ENST00000518528 Q5BKY6 102 aa5.21□□□□□ -1.58
PVT1-207ENST00000518528 TMEM18Q96B42 140 aa5.21□□□□□ -1.58
PVT1-207ENST00000518528 CYTL1Q9NRR1 136 aa5.21□□□□□ -1.58
PVT1-207ENST00000518528 TMA7Q9Y2S6 64 aaKnown RBP5.21□□□□□ -1.58
PVT1-207ENST00000518528 A0A087X002 238 aa5.2□□□□□ -1.58
PVT1-207ENST00000518528 CTAG1AP78358 180 aa5.2□□□□□ -1.58
PVT1-207ENST00000518528 UNQ6190/PRO20217Q6UXQ8 127 aa5.2□□□□□ -1.58
PVT1-207ENST00000518528 LINC00304Q8N9R0 145 aa5.2□□□□□ -1.58
PVT1-207ENST00000518528 GNG13Q9P2W3 67 aa5.2□□□□□ -1.58
PVT1-207ENST00000518528 TRBV27A0A0K0K1C4 114 aa5.19□□□□□ -1.58
PVT1-207ENST00000518528 RAB19A4D1S5 217 aa5.19□□□□□ -1.58
PVT1-207ENST00000518528 VCYO14598 125 aa5.19□□□□□ -1.58
PVT1-207ENST00000518528 RNASE13Q5GAN3 156 aaKnown RBP5.19□□□□□ -1.58
PVT1-207ENST00000518528 C10orf25Q5T742 122 aa5.19□□□□□ -1.58
PVT1-207ENST00000518528 LINC00337Q8N6G1 96 aa5.19□□□□□ -1.58
PVT1-207ENST00000518528 NUDT10Q8NFP7 164 aa5.19□□□□□ -1.58
PVT1-207ENST00000518528 BORCS7Q96B45 105 aa5.19□□□□□ -1.58
PVT1-207ENST00000518528 NUDT11Q96G61 164 aa5.19□□□□□ -1.58
PVT1-207ENST00000518528 PACRGQ96M98 296 aaPredicted RBP5.19□□□□□ -1.58
PVT1-207ENST00000518528 CTDSP1Q9GZU7 261 aa5.19□□□□□ -1.58
PVT1-207ENST00000518528 C6orf48Q9UBA6 75 aa5.19□□□□□ -1.58
PVT1-207ENST00000518528 TRBV30A0A0K0K1B3 111 aa5.18□□□□□ -1.58
PVT1-207ENST00000518528 NDUFC2-KCTD14E9PQ53 114 aa5.18□□□□□ -1.58
PVT1-207ENST00000518528 TEX46H3BTG2 121 aa5.18□□□□□ -1.58
PVT1-207ENST00000518528 PDE6DO43924 150 aa5.18□□□□□ -1.58
PVT1-207ENST00000518528 PPP1R17O96001 155 aa5.18□□□□□ -1.58
PVT1-207ENST00000518528 POLR2KP53803 58 aaKnown RBP5.18□□□□□ -1.58
PVT1-207ENST00000518528 FOXA3P55318 350 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms