RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 F2Z2F3 143 aa7.19□□□□□ -1.26
TRAPPC9-203ENST00000517667 GAGE6Q13070 117 aa7.19□□□□□ -1.26
TRAPPC9-203ENST00000517667 SMIM15Q7Z3B0 74 aa7.19□□□□□ -1.26
TRAPPC9-203ENST00000517667 TRAPPC1Q9Y5R8 145 aa7.19□□□□□ -1.26
TRAPPC9-203ENST00000517667 TMSB15BA0A087X1C1 80 aa7.18□□□□□ -1.26
TRAPPC9-203ENST00000517667 A0A1B0GUT8 65 aa7.18□□□□□ -1.26
TRAPPC9-203ENST00000517667 SLPIP03973 132 aa7.18□□□□□ -1.26
TRAPPC9-203ENST00000517667 CRIP1P50238 77 aa7.18□□□□□ -1.26
TRAPPC9-203ENST00000517667 FOXA3P55318 350 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC9-203ENST00000517667 NTM-AS1Q6ZSK4 140 aa7.18□□□□□ -1.26
TRAPPC9-203ENST00000517667 FER1L6-AS1Q8NA97 138 aa7.18□□□□□ -1.26
TRAPPC9-203ENST00000517667 NUP35Q8NFH5 326 aa7.18□□□□□ -1.26
TRAPPC9-203ENST00000517667 COX6A2Q02221 97 aa7.17□□□□□ -1.26
TRAPPC9-203ENST00000517667 IQCJQ1A5X6 159 aa7.17□□□□□ -1.26
TRAPPC9-203ENST00000517667 MAJINQ3KP22 176 aa7.17□□□□□ -1.26
TRAPPC9-203ENST00000517667 MRPL54Q6P161 138 aaKnown RBP7.17□□□□□ -1.26
TRAPPC9-203ENST00000517667 TPPP3Q9BW30 176 aa7.17□□□□□ -1.26
TRAPPC9-203ENST00000517667 IGHV1-24A0A0C4DH33 117 aa7.16□□□□□ -1.26
TRAPPC9-203ENST00000517667 F5H697 171 aa7.16□□□□□ -1.26
TRAPPC9-203ENST00000517667 TRGC2P03986 189 aa7.16□□□□□ -1.26
TRAPPC9-203ENST00000517667 CACNG7P62955 275 aa7.16□□□□□ -1.26
TRAPPC9-203ENST00000517667 CFAP161Q6P656 301 aa7.16□□□□□ -1.26
TRAPPC9-203ENST00000517667 STPG4Q8N801 248 aa7.16□□□□□ -1.26
TRAPPC9-203ENST00000517667 PGLYRP4Q96LB8 373 aa7.16□□□□□ -1.26
TRAPPC9-203ENST00000517667 IGKV2-24A0A0C4DH68 120 aa7.15□□□□□ -1.26
TRAPPC9-203ENST00000517667 A0A1B0GUV1 79 aa7.15□□□□□ -1.26
TRAPPC9-203ENST00000517667 APCSP02743 223 aa7.15□□□□□ -1.26
TRAPPC9-203ENST00000517667 CTRLP40313 264 aa7.15□□□□□ -1.26
TRAPPC9-203ENST00000517667 FABP9Q0Z7S8 132 aa7.15□□□□□ -1.26
TRAPPC9-203ENST00000517667 MRPL18Q9H0U6 180 aaKnown RBP7.15□□□□□ -1.26
TRAPPC9-203ENST00000517667 LINC00474Q9P2X8 69 aa7.15□□□□□ -1.26
TRAPPC9-203ENST00000517667 LPAP08519 4548 aa7.14□□□□□ -1.27
TRAPPC9-203ENST00000517667 OR5AL1P0C617 328 aa7.14□□□□□ -1.27
TRAPPC9-203ENST00000517667 TRGC1P0CF51 173 aa7.14□□□□□ -1.27
TRAPPC9-203ENST00000517667 SMIM17P0DL12 118 aa7.14□□□□□ -1.27
TRAPPC9-203ENST00000517667 SPANXN1Q5VSR9 72 aa7.14□□□□□ -1.27
TRAPPC9-203ENST00000517667 C20orf203Q8NBC4 194 aa7.14□□□□□ -1.27
TRAPPC9-203ENST00000517667 OR10AG1Q8NH19 301 aa7.14□□□□□ -1.27
TRAPPC9-203ENST00000517667 PKIGQ9Y2B9 76 aa7.14□□□□□ -1.27
TRAPPC9-203ENST00000517667 A0A1B0GXF2 115 aa7.13□□□□□ -1.27
TRAPPC9-203ENST00000517667 IGLC6P0CF74 106 aa7.13□□□□□ -1.27
TRAPPC9-203ENST00000517667 CAMPP49913 170 aa7.13□□□□□ -1.27
TRAPPC9-203ENST00000517667 LYZL1Q6UWQ5 148 aa7.13□□□□□ -1.27
TRAPPC9-203ENST00000517667 Q6ZRP5 223 aa7.13□□□□□ -1.27
TRAPPC9-203ENST00000517667 TMEM136Q6ZRR5 245 aa7.13□□□□□ -1.27
TRAPPC9-203ENST00000517667 C15orf56Q8N910 161 aa7.13□□□□□ -1.27
TRAPPC9-203ENST00000517667 PRSS3P2Q8NHM4 247 aa7.13□□□□□ -1.27
TRAPPC9-203ENST00000517667 KRTAP9-2Q9BYQ4 174 aa7.13□□□□□ -1.27
TRAPPC9-203ENST00000517667 H7C1H1 209 aa7.12□□□□□ -1.27
TRAPPC9-203ENST00000517667 SNAI2O43623 268 aa7.12□□□□□ -1.27
TRAPPC9-203ENST00000517667 SRSF9Q13242 221 aaKnown RBP eCLIP7.12□□□□□ -1.27
TRAPPC9-203ENST00000517667 TWIST1Q15672 202 aa7.12□□□□□ -1.27
TRAPPC9-203ENST00000517667 AP1S3Q96PC3 154 aa7.12□□□□□ -1.27
TRAPPC9-203ENST00000517667 TMEM243Q9BU79 118 aa7.12□□□□□ -1.27
TRAPPC9-203ENST00000517667 CNFNQ9BYD5 112 aa7.12□□□□□ -1.27
TRAPPC9-203ENST00000517667 MUC2Q02817 5179 aa7.12□□□□□ -1.27
TRAPPC9-203ENST00000517667 IGLV4-60A0A075B6I1 120 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 MUC21A0A0G2JKD1 596 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 A0A0U1RQV1 116 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 HIST1H2BKO60814 126 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 PPBPP02775 128 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 HIST1H2BJP06899 126 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 HIST1H2BOP23527 126 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 S100A2P29034 98 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 HIST1H2BBP33778 126 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 HIST1H2BDP58876 126 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 HIST1H2BCP62807 126 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 HIST2H2BEQ16778 126 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 GATD1Q8NB37 220 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 HIST1H2BHQ93079 126 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 HIST1H2BNQ99877 126 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 HIST1H2BMQ99879 126 aa7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 SSBP4Q9BWG4 385 aaPredicted RBP7.11□□□□□ -1.27
TRAPPC9-203ENST00000517667 A0A096LNI7 61 aa7.1□□□□□ -1.27
TRAPPC9-203ENST00000517667 UBE2L6O14933 153 aa7.1□□□□□ -1.27
TRAPPC9-203ENST00000517667 NDUFA6P56556 154 aa7.1□□□□□ -1.27
TRAPPC9-203ENST00000517667 TMEM191AQ9H0A3 160 aa7.1□□□□□ -1.27
TRAPPC9-203ENST00000517667 GVQW2A0A096LPI5 108 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC9-203ENST00000517667 GAGE12HA6NDE8 117 aa7.09□□□□□ -1.27
TRAPPC9-203ENST00000517667 NTF3P20783 257 aa7.09□□□□□ -1.27
TRAPPC9-203ENST00000517667 HIGD2BQ4VC39 106 aa7.09□□□□□ -1.27
TRAPPC9-203ENST00000517667 BAGE3Q86Y29 109 aa7.09□□□□□ -1.27
TRAPPC9-203ENST00000517667 ZNF664Q8N3J9 261 aa7.09□□□□□ -1.27
TRAPPC9-203ENST00000517667 LAMTOR2Q9Y2Q5 125 aa7.09□□□□□ -1.27
TRAPPC9-203ENST00000517667 MUC21A0A140T8X8 626 aa7.08□□□□□ -1.28
TRAPPC9-203ENST00000517667 M0QY20 66 aa7.08□□□□□ -1.28
TRAPPC9-203ENST00000517667 PPP1R17O96001 155 aa7.08□□□□□ -1.28
TRAPPC9-203ENST00000517667 ORMDL3Q8N138 153 aa7.08□□□□□ -1.28
TRAPPC9-203ENST00000517667 C5orf52A6NGY3 159 aa7.07□□□□□ -1.28
TRAPPC9-203ENST00000517667 MGPP08493 103 aa7.07□□□□□ -1.28
TRAPPC9-203ENST00000517667 SNRPEP62304 92 aaKnown RBP7.07□□□□□ -1.28
TRAPPC9-203ENST00000517667 COA6Q5JTJ3 125 aaKnown RBP7.07□□□□□ -1.28
TRAPPC9-203ENST00000517667 FAM104BQ5XKR9 115 aa7.07□□□□□ -1.28
TRAPPC9-203ENST00000517667 TMEM18Q96B42 140 aa7.07□□□□□ -1.28
TRAPPC9-203ENST00000517667 CKS2P33552 79 aa7.06□□□□□ -1.28
TRAPPC9-203ENST00000517667 SSTP61278 116 aa7.06□□□□□ -1.28
TRAPPC9-203ENST00000517667 MRAP2Q96G30 205 aa7.06□□□□□ -1.28
TRAPPC9-203ENST00000517667 PSORS1C2Q9UIG4 136 aa7.06□□□□□ -1.28
TRAPPC9-203ENST00000517667 TRAV26-2A0A0B4J265 109 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms