RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 NDUFB11Q9NX14 153 aa0.94□□□□□ -2.26
RNU1-48P-201ENST00000516400 STRAPQ9Y3F4 350 aaKnown RBP0.94□□□□□ -2.26
RNU1-48P-201ENST00000516400 hCG_2014768A0A024R1R8 64 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 SMCO3A2RU48 225 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 FABP5P3A8MUU1 101 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 C1orf196B1AJZ1 125 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 M0R381 172 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 CTDSP2O14595 271 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 ZNF25P17030 456 aaPredicted RBP0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 SDC2P34741 201 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 TMBIM6P55061 237 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 KRTAP10-12P60413 245 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 RPL32P62910 135 aaKnown RBP0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 MOBPQ13875 183 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 Q1RN00 199 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 SMUG1Q53HV7 270 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 Q6ZRG5 221 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 CBLN2Q8IUK8 224 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 ZFP82Q8N141 532 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 C12orf45Q8N5I9 185 aaPredicted RBP0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 LINC00469Q8N7U9 141 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 DYNC2LI1Q8TCX1 351 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 SMCR5Q8TEV8 140 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 NIT2Q9NQR4 276 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 OTORQ9NRC9 128 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 NUDT15Q9NV35 164 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 RABL2AQ9UBK7 228 aaPredicted RBP0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 RABL2BQ9UNT1 228 aa0.93□□□□□ -2.26
RNU1-48P-201ENST00000516400 LOC107984156A0A0G2JMH3 177 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 C9orf170A2RU37 121 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 C7orf66A4D0T2 115 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 A8MUU9 505 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 B4DEV8 164 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 PRYO14603 147 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 MED6O75586 246 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 ERC2-IT1O76042 136 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 S100A4P26447 101 aaKnown RBP0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 FLI1Q01543 452 aaPredicted RBP0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 ZNF56Q15929 161 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 C10orf91Q5T1B1 145 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 FAAP20Q6NZ36 180 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 ATP11AUNQ6ZP68 121 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 KRTAP19-3Q7Z4W3 81 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 LINC01551Q86U37 167 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 CLVS1Q8IUQ0 354 aaPredicted RBP0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 ARL17AQ8IVW1 177 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 C15orf40Q8WUR7 153 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 PYDC1Q8WXC3 89 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 S100A16Q96FQ6 103 aaKnown RBP0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 SLC25A21Q9BQT8 299 aaPredicted RBP0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 NMES1Q9C002 83 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 LYRM2Q9NU23 88 aaPredicted RBP0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 PSENENQ9NZ42 101 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 MTFP1Q9UDX5 166 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 PAIP2BQ9ULR5 123 aaKnown RBP0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 CSDC2Q9Y534 153 aaKnown RBP0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 ORC6Q9Y5N6 252 aa0.92□□□□□ -2.26
RNU1-48P-201ENST00000516400 TRBV20-1A0A075B6N2 111 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 IGKV2-28A0A075B6P5 120 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 GAGE10A6NGK3 116 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 L7N2F9 121 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 UBE2L6O14933 153 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 SH2D1AO60880 128 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 NCR2O95944 276 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 IGKV2D-28P01615 120 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 OR5AL1P0C617 328 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 SPRR1AP35321 89 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 TAS2R30P59541 319 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 TAS2R19P59542 299 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 GABARAPL2P60520 117 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 VAMP2P63027 116 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 RBM3P98179 157 aaKnown RBP0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 PPP1R1AQ13522 171 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 COTL1Q14019 142 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 KRTAP19-7Q3SYF9 63 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 RNASEKQ6P5S7 137 aaKnown RBP0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 RASL11AQ6T310 242 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 FAM19A1Q7Z5A9 133 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 SMIM29Q86T20 159 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 TMEM252Q8N6L7 170 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 TMEM229BQ8NBD8 167 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 ORAOV1Q8WV07 137 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 HYLS1Q96M11 299 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 MED9Q9NWA0 146 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 MBD2Q9UBB5 411 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 EXTL2Q9UBQ6 330 aa0.91□□□□□ -2.26
RNU1-48P-201ENST00000516400 MUC21A0A140T8X8 626 aa0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 FAM25EA8MYX2 175 aa0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 PTGES3LE9PB15 166 aa0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 H3BMQ9 156 aa0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 CXCL1P09341 107 aa0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 TPT1P13693 172 aaKnown RBP0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 MYL9P24844 172 aa0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 RNASE10Q5GAN6 216 aaKnown RBP0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 UBE2NLQ5JXB2 153 aa0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 SAPCD1Q5SSQ6 148 aa0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 FAM19A3Q7Z5A8 133 aa0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 GATD1Q8NB37 220 aa0.9□□□□□ -2.27
RNU1-48P-201ENST00000516400 AP3S1Q92572 193 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms