RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 DOCK11Q5JSL3 2073 aa0.88□□□□□ -2.27
RNU6-488P-201ENST00000515918 KDM5AP29375 1690 aaKnown RBP0.88□□□□□ -2.27
RNU6-488P-201ENST00000515918 C10orf142B7Z368 130 aa0.88□□□□□ -2.27
RNU6-488P-201ENST00000515918 SFTA2Q6UW10 78 aa0.88□□□□□ -2.27
RNU6-488P-201ENST00000515918 SMIM4Q8WVI0 70 aa0.88□□□□□ -2.27
RNU6-488P-201ENST00000515918 HMGXB3Q12766 1538 aa0.88□□□□□ -2.27
RNU6-488P-201ENST00000515918 GNGT2O14610 69 aa0.87□□□□□ -2.27
RNU6-488P-201ENST00000515918 SFT2D2O95562 160 aa0.87□□□□□ -2.27
RNU6-488P-201ENST00000515918 SEC11AP67812 179 aa0.87□□□□□ -2.27
RNU6-488P-201ENST00000515918 TMEM170BQ5T4T1 132 aa0.87□□□□□ -2.27
RNU6-488P-201ENST00000515918 NPVFQ9HCQ7 196 aa0.87□□□□□ -2.27
RNU6-488P-201ENST00000515918 PRO1854Q9UHT4 67 aa0.87□□□□□ -2.27
RNU6-488P-201ENST00000515918 EHBP1L1Q8N3D4 1523 aa0.87□□□□□ -2.27
RNU6-488P-201ENST00000515918 KIF21AQ7Z4S6 1674 aa0.87□□□□□ -2.27
RNU6-488P-201ENST00000515918 CHD1O14646 1710 aa0.86□□□□□ -2.27
RNU6-488P-201ENST00000515918 KRTDAPP60985 99 aa0.86□□□□□ -2.27
RNU6-488P-201ENST00000515918 FAM223AQ8IWN6 122 aa0.86□□□□□ -2.27
RNU6-488P-201ENST00000515918 SNHG12Q9BXW3 62 aa0.86□□□□□ -2.27
RNU6-488P-201ENST00000515918 ABCA3Q99758 1704 aa0.86□□□□□ -2.27
RNU6-488P-201ENST00000515918 TEX14Q8IWB6 1497 aa0.86□□□□□ -2.27
RNU6-488P-201ENST00000515918 TOP2BQ02880 1626 aa0.86□□□□□ -2.27
RNU6-488P-201ENST00000515918 ZNF469Q96JG9 3925 aaPredicted RBP0.85□□□□□ -2.27
RNU6-488P-201ENST00000515918 PIN1P1O15428 100 aa0.85□□□□□ -2.27
RNU6-488P-201ENST00000515918 PKIAP61925 76 aa0.85□□□□□ -2.27
RNU6-488P-201ENST00000515918 COX17Q14061 63 aa0.85□□□□□ -2.27
RNU6-488P-201ENST00000515918 UBE2DNLQ8IWF7 75 aa0.85□□□□□ -2.27
RNU6-488P-201ENST00000515918 NXT2Q9NPJ8 142 aaKnown RBP0.85□□□□□ -2.27
RNU6-488P-201ENST00000515918 DIP2CQ9Y2E4 1556 aa0.85□□□□□ -2.27
RNU6-488P-201ENST00000515918 ARL2-SNX15V9GYD0 113 aa0.85□□□□□ -2.27
RNU6-488P-201ENST00000515918 PRDM15P57071 1507 aaPredicted RBP0.84□□□□□ -2.27
RNU6-488P-201ENST00000515918 ANKRD36BQ8N2N9 1353 aa0.84□□□□□ -2.27
RNU6-488P-201ENST00000515918 UNC13BO14795 1591 aa0.84□□□□□ -2.27
RNU6-488P-201ENST00000515918 APOC3P02656 99 aa0.84□□□□□ -2.27
RNU6-488P-201ENST00000515918 COX6CP09669 75 aa0.84□□□□□ -2.27
RNU6-488P-201ENST00000515918 IGLC1P0CG04 106 aa0.84□□□□□ -2.27
RNU6-488P-201ENST00000515918 SSBP3-AS1Q7Z2R9 100 aa0.84□□□□□ -2.27
RNU6-488P-201ENST00000515918 NAV3Q8IVL0 2385 aa0.84□□□□□ -2.28
RNU6-488P-201ENST00000515918 FBN2P35556 2912 aa0.84□□□□□ -2.28
RNU6-488P-201ENST00000515918 PMCHL2Q9BQD1 86 aa0.83□□□□□ -2.28
RNU6-488P-201ENST00000515918 DPY30Q9C005 99 aa0.83□□□□□ -2.28
RNU6-488P-201ENST00000515918 PLAC8Q9NZF1 115 aa0.83□□□□□ -2.28
RNU6-488P-201ENST00000515918 FYCO1Q9BQS8 1478 aa0.83□□□□□ -2.28
RNU6-488P-201ENST00000515918 MEGF8Q7Z7M0 2845 aa0.83□□□□□ -2.28
RNU6-488P-201ENST00000515918 COL4A6Q14031 1691 aa0.82□□□□□ -2.28
RNU6-488P-201ENST00000515918 GAPVD1Q14C86 1478 aa0.82□□□□□ -2.28
RNU6-488P-201ENST00000515918 ZNF815PA8K554 130 aa0.82□□□□□ -2.28
RNU6-488P-201ENST00000515918 TRAPPC2P0DI81 140 aa0.82□□□□□ -2.28
RNU6-488P-201ENST00000515918 TRAPPC2BP0DI82 140 aa0.82□□□□□ -2.28
RNU6-488P-201ENST00000515918 COL5A1-AS1Q5SY13 56 aa0.82□□□□□ -2.28
RNU6-488P-201ENST00000515918 AP4S1Q9Y587 144 aa0.82□□□□□ -2.28
RNU6-488P-201ENST00000515918 FRAS1Q86XX4 4008 aa0.82□□□□□ -2.28
RNU6-488P-201ENST00000515918 NOTCH1P46531 2555 aa0.82□□□□□ -2.28
RNU6-488P-201ENST00000515918 MYO7AQ13402 2215 aa0.81□□□□□ -2.28
RNU6-488P-201ENST00000515918 LRRC37A2A6NM11 1700 aa0.81□□□□□ -2.28
RNU6-488P-201ENST00000515918 FAM223BA6NKX1 122 aa0.81□□□□□ -2.28
RNU6-488P-201ENST00000515918 UBA52P62987 128 aaKnown RBP0.81□□□□□ -2.28
RNU6-488P-201ENST00000515918 CADP27708 2225 aa0.81□□□□□ -2.28
RNU6-488P-201ENST00000515918 SCN7AQ01118 1682 aa0.81□□□□□ -2.28
RNU6-488P-201ENST00000515918 ADGRL2O95490 1459 aa0.8□□□□□ -2.28
RNU6-488P-201ENST00000515918 LRP6O75581 1613 aa0.8□□□□□ -2.28
RNU6-488P-201ENST00000515918 M0R3E3 92 aa0.8□□□□□ -2.28
RNU6-488P-201ENST00000515918 LINC00032P0C843 101 aa0.8□□□□□ -2.28
RNU6-488P-201ENST00000515918 HAMPP81172 84 aa0.8□□□□□ -2.28
RNU6-488P-201ENST00000515918 SPRR4Q96PI1 79 aa0.8□□□□□ -2.28
RNU6-488P-201ENST00000515918 NSD3Q9BZ95 1437 aa0.8□□□□□ -2.28
RNU6-488P-201ENST00000515918 KCPQ6ZWJ8 1503 aa0.79□□□□□ -2.28
RNU6-488P-201ENST00000515918 SMARCA2P51531 1590 aa0.79□□□□□ -2.28
RNU6-488P-201ENST00000515918 LAMC1P11047 1609 aa0.79□□□□□ -2.28
RNU6-488P-201ENST00000515918 MGPP08493 103 aa0.79□□□□□ -2.28
RNU6-488P-201ENST00000515918 KRTAP2-3P0C7H8 128 aa0.79□□□□□ -2.28
RNU6-488P-201ENST00000515918 Q6JHZ5 121 aa0.79□□□□□ -2.28
RNU6-488P-201ENST00000515918 KRTAP2-4Q9BYR9 128 aa0.79□□□□□ -2.28
RNU6-488P-201ENST00000515918 KRTAP2-1Q9BYU5 128 aa0.79□□□□□ -2.28
RNU6-488P-201ENST00000515918 MAGI1Q96QZ7 1491 aaPredicted RBP0.79□□□□□ -2.28
RNU6-488P-201ENST00000515918 ASXL3Q9C0F0 2248 aa0.79□□□□□ -2.28
RNU6-488P-201ENST00000515918 A0A0G2JND7 137 aa0.78□□□□□ -2.28
RNU6-488P-201ENST00000515918 FAIMQ9NVQ4 179 aa0.78□□□□□ -2.28
RNU6-488P-201ENST00000515918 CACFD1Q9UGQ2 172 aa0.78□□□□□ -2.28
RNU6-488P-201ENST00000515918 MLH3Q9UHC1 1453 aa0.78□□□□□ -2.28
RNU6-488P-201ENST00000515918 ANKRD26Q9UPS8 1709 aa0.78□□□□□ -2.29
RNU6-488P-201ENST00000515918 CACNA1HO95180 2353 aa0.77□□□□□ -2.29
RNU6-488P-201ENST00000515918 H7BZZ5 65 aa0.77□□□□□ -2.29
RNU6-488P-201ENST00000515918 ATOX1O00244 68 aa0.77□□□□□ -2.29
RNU6-488P-201ENST00000515918 NDUFC1O43677 76 aa0.77□□□□□ -2.29
RNU6-488P-201ENST00000515918 PRH1P02810 166 aa0.77□□□□□ -2.29
RNU6-488P-201ENST00000515918 COX6A2Q02221 97 aa0.77□□□□□ -2.29
RNU6-488P-201ENST00000515918 VAMP8Q9BV40 100 aa0.77□□□□□ -2.29
RNU6-488P-201ENST00000515918 RAPGEF6Q8TEU7 1601 aa0.77□□□□□ -2.29
RNU6-488P-201ENST00000515918 TCHHQ07283 1943 aa0.76□□□□□ -2.29
RNU6-488P-201ENST00000515918 BCE1O60756 84 aa0.76□□□□□ -2.29
RNU6-488P-201ENST00000515918 SAA2P0DJI9 122 aaPredicted RBP0.76□□□□□ -2.29
RNU6-488P-201ENST00000515918 SBF2Q86WG5 1849 aa0.75□□□□□ -2.29
RNU6-488P-201ENST00000515918 AKAP12Q02952 1782 aa0.75□□□□□ -2.29
RNU6-488P-201ENST00000515918 TTC28Q96AY4 2481 aa0.75□□□□□ -2.29
RNU6-488P-201ENST00000515918 TROQ12816 1431 aaPredicted RBP0.75□□□□□ -2.29
RNU6-488P-201ENST00000515918 SERP2Q8N6R1 65 aa0.75□□□□□ -2.29
RNU6-488P-201ENST00000515918 KDM3BQ7LBC6 1761 aa0.75□□□□□ -2.29
RNU6-488P-201ENST00000515918 BTAF1O14981 1849 aa0.74□□□□□ -2.29
RNU6-488P-201ENST00000515918 TRBV7-7A0A0K0K1E9 115 aa0.74□□□□□ -2.29
RNU6-488P-201ENST00000515918 ASIPP42127 132 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms