RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 GVQW2A0A096LPI5 108 aaPredicted RBP6.66□□□□□ -1.34
HMGXB3-205ENST00000514469 SMKR1H3BMG3 65 aa6.66□□□□□ -1.34
HMGXB3-205ENST00000514469 SRSF3P84103 164 aaKnown RBP6.66□□□□□ -1.34
HMGXB3-205ENST00000514469 ADIRFQ15847 76 aa6.66□□□□□ -1.34
HMGXB3-205ENST00000514469 HIGD2BQ4VC39 106 aa6.66□□□□□ -1.34
HMGXB3-205ENST00000514469 NRACQ8N912 160 aa6.66□□□□□ -1.34
HMGXB3-205ENST00000514469 BTF3L4Q96K17 158 aa6.66□□□□□ -1.34
HMGXB3-205ENST00000514469 NAT8Q9UHE5 227 aa6.66□□□□□ -1.34
HMGXB3-205ENST00000514469 HMCN2Q8NDA2 5059 aa6.65□□□□□ -1.34
HMGXB3-205ENST00000514469 LINC00959A0A1B0GUT2 108 aa6.65□□□□□ -1.34
HMGXB3-205ENST00000514469 SMIM27A0A1W2PRY6 76 aa6.65□□□□□ -1.34
HMGXB3-205ENST00000514469 C7orf77A4D0Y5 90 aa6.65□□□□□ -1.34
HMGXB3-205ENST00000514469 PPP1R17O96001 155 aa6.65□□□□□ -1.34
HMGXB3-205ENST00000514469 OXTP01178 125 aa6.65□□□□□ -1.34
HMGXB3-205ENST00000514469 CHTF8P0CG12 524 aa6.65□□□□□ -1.34
HMGXB3-205ENST00000514469 HNRNPA3P51991 378 aaKnown RBP6.65□□□□□ -1.34
HMGXB3-205ENST00000514469 SMDT1Q9H4I9 107 aa6.65□□□□□ -1.34
HMGXB3-205ENST00000514469 A0A087WYN8 130 aa6.64□□□□□ -1.35
HMGXB3-205ENST00000514469 CCL25O15444 150 aa6.64□□□□□ -1.35
HMGXB3-205ENST00000514469 XCL1P47992 114 aa6.64□□□□□ -1.35
HMGXB3-205ENST00000514469 SUMO2P61956 95 aaKnown RBP6.64□□□□□ -1.35
HMGXB3-205ENST00000514469 PEA15Q15121 130 aa6.64□□□□□ -1.35
HMGXB3-205ENST00000514469 MRPL51Q4U2R6 128 aaKnown RBP6.64□□□□□ -1.35
HMGXB3-205ENST00000514469 FAM104BQ5XKR9 115 aa6.64□□□□□ -1.35
HMGXB3-205ENST00000514469 CDC42SE2Q9NRR3 84 aa6.64□□□□□ -1.35
HMGXB3-205ENST00000514469 A0A1B0GW15 77 aa6.63□□□□□ -1.35
HMGXB3-205ENST00000514469 VCYO14598 125 aa6.63□□□□□ -1.35
HMGXB3-205ENST00000514469 PPP1R2P9O14990 202 aa6.63□□□□□ -1.35
HMGXB3-205ENST00000514469 FCER1GP30273 86 aa6.63□□□□□ -1.35
HMGXB3-205ENST00000514469 COX6A2Q02221 97 aa6.63□□□□□ -1.35
HMGXB3-205ENST00000514469 ZNF664Q8N3J9 261 aa6.63□□□□□ -1.35
HMGXB3-205ENST00000514469 PLAC8Q9NZF1 115 aa6.63□□□□□ -1.35
HMGXB3-205ENST00000514469 IGHV1-58A0A0C4DH39 117 aa6.62□□□□□ -1.35
HMGXB3-205ENST00000514469 SS18Q15532 418 aa6.62□□□□□ -1.35
HMGXB3-205ENST00000514469 CD164L2Q6UWJ8 174 aa6.62□□□□□ -1.35
HMGXB3-205ENST00000514469 KIR2DL4Q99706 377 aa6.62□□□□□ -1.35
HMGXB3-205ENST00000514469 UBE2D4Q9Y2X8 147 aa6.62□□□□□ -1.35
HMGXB3-205ENST00000514469 CSDC2Q9Y534 153 aaKnown RBP6.62□□□□□ -1.35
HMGXB3-205ENST00000514469 TRBV24-1A0A075B6N3 115 aa6.61□□□□□ -1.35
HMGXB3-205ENST00000514469 A0A1B0GXF2 115 aa6.61□□□□□ -1.35
HMGXB3-205ENST00000514469 LINC00862A6NCI5 91 aa6.61□□□□□ -1.35
HMGXB3-205ENST00000514469 RPL32P62910 135 aaKnown RBP6.61□□□□□ -1.35
HMGXB3-205ENST00000514469 PRSS3P2Q8NHM4 247 aa6.61□□□□□ -1.35
HMGXB3-205ENST00000514469 C20orf78Q9BR46 151 aa6.61□□□□□ -1.35
HMGXB3-205ENST00000514469 A0A096LNI7 61 aa6.6□□□□□ -1.35
HMGXB3-205ENST00000514469 CAMPP49913 170 aa6.6□□□□□ -1.35
HMGXB3-205ENST00000514469 HBBP68871 147 aa6.6□□□□□ -1.35
HMGXB3-205ENST00000514469 SMAGPQ0VAQ4 97 aa6.6□□□□□ -1.35
HMGXB3-205ENST00000514469 TIMM21Q9BVV7 248 aa6.6□□□□□ -1.35
HMGXB3-205ENST00000514469 IGKV2-24A0A0C4DH68 120 aa6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 C1orf196B1AJZ1 125 aa6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 PHOX2AO14813 284 aa6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 TCAPO15273 167 aa6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 TNFRSF6BO95407 300 aa6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 S100A8P05109 93 aa6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 CKS2P33552 79 aa6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 MAJINQ3KP22 176 aa6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 RNASE13Q5GAN3 156 aaKnown RBP6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 MRPL54Q6P161 138 aaKnown RBP6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 Q6ZUT4 128 aa6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 LINC00526Q96FQ7 95 aa6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 DPH3Q96FX2 82 aa6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 CARD19Q96LW7 228 aa6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 SMIM2Q9BVW6 85 aa6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 PKIGQ9Y2B9 76 aa6.59□□□□□ -1.35
HMGXB3-205ENST00000514469 D6R8Y8 96 aa6.58□□□□□ -1.36
HMGXB3-205ENST00000514469 F8W036 122 aa6.58□□□□□ -1.36
HMGXB3-205ENST00000514469 ZNF561-AS1K7EIQ3 104 aa6.58□□□□□ -1.36
HMGXB3-205ENST00000514469 Q6ZRU5 148 aa6.58□□□□□ -1.36
HMGXB3-205ENST00000514469 STPG4Q8N801 248 aa6.58□□□□□ -1.36
HMGXB3-205ENST00000514469 C7orf33Q8WU49 177 aa6.58□□□□□ -1.36
HMGXB3-205ENST00000514469 TMEM18Q96B42 140 aa6.58□□□□□ -1.36
HMGXB3-205ENST00000514469 LINC00474Q9P2X8 69 aa6.58□□□□□ -1.36
HMGXB3-205ENST00000514469 COX7A2LO14548 114 aa6.57□□□□□ -1.36
HMGXB3-205ENST00000514469 NPYP01303 97 aa6.57□□□□□ -1.36
HMGXB3-205ENST00000514469 SYCNQ0VAF6 134 aa6.57□□□□□ -1.36
HMGXB3-205ENST00000514469 SERTAD4-AS1Q5TG53 156 aa6.57□□□□□ -1.36
HMGXB3-205ENST00000514469 ATP5L2Q7Z4Y8 100 aa6.57□□□□□ -1.36
HMGXB3-205ENST00000514469 IGLV4-69A0A075B6H9 119 aa6.56□□□□□ -1.36
HMGXB3-205ENST00000514469 TRAV13-1A0A0B4J241 112 aa6.56□□□□□ -1.36
HMGXB3-205ENST00000514469 PPBPP02775 128 aa6.56□□□□□ -1.36
HMGXB3-205ENST00000514469 MT1HL1P0DM35 61 aa6.56□□□□□ -1.36
HMGXB3-205ENST00000514469 RPL39P62891 51 aaKnown RBP6.56□□□□□ -1.36
HMGXB3-205ENST00000514469 PRR3P79522 188 aaKnown RBP6.56□□□□□ -1.36
HMGXB3-205ENST00000514469 FAM104AQ969W3 186 aa6.56□□□□□ -1.36
HMGXB3-205ENST00000514469 SPANXA1Q9NS26 97 aa6.56□□□□□ -1.36
HMGXB3-205ENST00000514469 MALP21145 153 aa6.55□□□□□ -1.36
HMGXB3-205ENST00000514469 MRPS36P82909 103 aaKnown RBP6.55□□□□□ -1.36
HMGXB3-205ENST00000514469 LOC107984640A0A0U1RRK4 108 aa6.54□□□□□ -1.36
HMGXB3-205ENST00000514469 PTTG1IPP53801 180 aa6.54□□□□□ -1.36
HMGXB3-205ENST00000514469 PNRC1Q12796 327 aaPredicted RBP6.54□□□□□ -1.36
HMGXB3-205ENST00000514469 ORMDL3Q8N138 153 aa6.54□□□□□ -1.36
HMGXB3-205ENST00000514469 C2orf48Q96LS8 159 aa6.54□□□□□ -1.36
HMGXB3-205ENST00000514469 TNXBP22105 4242 aa6.54□□□□□ -1.36
HMGXB3-205ENST00000514469 APOMO95445 188 aa6.53□□□□□ -1.36
HMGXB3-205ENST00000514469 SPAG11BQ08648 103 aa6.53□□□□□ -1.36
HMGXB3-205ENST00000514469 TMEM136Q6ZRR5 245 aa6.53□□□□□ -1.36
HMGXB3-205ENST00000514469 C5orf38Q86SI9 138 aa6.53□□□□□ -1.36
HMGXB3-205ENST00000514469 OR10D4PQ8NGN7 298 aa6.53□□□□□ -1.36
HMGXB3-205ENST00000514469 PRELID3AQ96N28 172 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms