RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 RETNLBQ9BQ08 111 aa6.19□□□□□ -1.42
CLDND1-227ENST00000513452 MARVELD1Q9BSK0 173 aa6.19□□□□□ -1.42
CLDND1-227ENST00000513452 F2Z2F3 143 aa6.18□□□□□ -1.42
CLDND1-227ENST00000513452 RPS20P60866 119 aaKnown RBP6.18□□□□□ -1.42
CLDND1-227ENST00000513452 UBE2BP63146 152 aa6.18□□□□□ -1.42
CLDND1-227ENST00000513452 LYZL1Q6UWQ5 148 aa6.18□□□□□ -1.42
CLDND1-227ENST00000513452 C2orf48Q96LS8 159 aa6.18□□□□□ -1.42
CLDND1-227ENST00000513452 C19orf71A6NCJ1 209 aa6.17□□□□□ -1.42
CLDND1-227ENST00000513452 SDHAF1A6NFY7 115 aa6.17□□□□□ -1.42
CLDND1-227ENST00000513452 PFDN1O60925 122 aa6.17□□□□□ -1.42
CLDND1-227ENST00000513452 UPK1BO75841 260 aa6.17□□□□□ -1.42
CLDND1-227ENST00000513452 SPAG11BQ08648 103 aa6.17□□□□□ -1.42
CLDND1-227ENST00000513452 RPP21Q9H633 154 aaKnown RBP6.17□□□□□ -1.42
CLDND1-227ENST00000513452 A0A1B0GV50 99 aa6.16□□□□□ -1.42
CLDND1-227ENST00000513452 A6NJY4 79 aa6.16□□□□□ -1.42
CLDND1-227ENST00000513452 M0QXV9 152 aa6.16□□□□□ -1.42
CLDND1-227ENST00000513452 ESDP10768 282 aa6.16□□□□□ -1.42
CLDND1-227ENST00000513452 RPL35P42766 123 aaKnown RBP6.16□□□□□ -1.42
CLDND1-227ENST00000513452 LINC01547P58512 204 aaPredicted RBP6.16□□□□□ -1.42
CLDND1-227ENST00000513452 TPRXLQ17RH7 258 aa6.16□□□□□ -1.42
CLDND1-227ENST00000513452 TMUB2Q71RG4 321 aa6.16□□□□□ -1.42
CLDND1-227ENST00000513452 MRAP2Q96G30 205 aa6.16□□□□□ -1.42
CLDND1-227ENST00000513452 CDC42SE2Q9NRR3 84 aa6.16□□□□□ -1.42
CLDND1-227ENST00000513452 A0A087X002 238 aa6.15□□□□□ -1.42
CLDND1-227ENST00000513452 XKRY2A2RUG3 117 aa6.15□□□□□ -1.42
CLDND1-227ENST00000513452 IFNA1P01562 189 aa6.15□□□□□ -1.42
CLDND1-227ENST00000513452 PMCHP20382 165 aa6.15□□□□□ -1.42
CLDND1-227ENST00000513452 IFITM3Q01628 133 aa6.15□□□□□ -1.42
CLDND1-227ENST00000513452 TWIST1Q15672 202 aa6.15□□□□□ -1.42
CLDND1-227ENST00000513452 RNF151Q2KHN1 245 aa6.15□□□□□ -1.42
CLDND1-227ENST00000513452 CENPWQ5EE01 88 aa6.15□□□□□ -1.42
CLDND1-227ENST00000513452 C5orf38Q86SI9 138 aa6.15□□□□□ -1.42
CLDND1-227ENST00000513452 C1orf196B1AJZ1 125 aa6.14□□□□□ -1.43
CLDND1-227ENST00000513452 I3L3M4 83 aa6.14□□□□□ -1.43
CLDND1-227ENST00000513452 TSHBP01222 138 aa6.14□□□□□ -1.43
CLDND1-227ENST00000513452 CTRLP40313 264 aa6.14□□□□□ -1.43
CLDND1-227ENST00000513452 SRSF3P84103 164 aaKnown RBP6.14□□□□□ -1.43
CLDND1-227ENST00000513452 GAGE2EQ4V326 116 aa6.14□□□□□ -1.43
CLDND1-227ENST00000513452 Q5BKY6 102 aa6.14□□□□□ -1.43
CLDND1-227ENST00000513452 KRTAP7-1Q8IUC3 87 aa6.14□□□□□ -1.43
CLDND1-227ENST00000513452 TYMSOSQ8TAI1 123 aa6.14□□□□□ -1.43
CLDND1-227ENST00000513452 S100ZQ8WXG8 99 aa6.14□□□□□ -1.43
CLDND1-227ENST00000513452 ANAPC16Q96DE5 110 aa6.14□□□□□ -1.43
CLDND1-227ENST00000513452 IMMP2LQ96T52 175 aa6.14□□□□□ -1.43
CLDND1-227ENST00000513452 TMEM242Q9NWH2 141 aa6.14□□□□□ -1.43
CLDND1-227ENST00000513452 NDUFA13Q9P0J0 144 aa6.14□□□□□ -1.43
CLDND1-227ENST00000513452 GAGE2DQ9UEU5 116 aa6.14□□□□□ -1.43
CLDND1-227ENST00000513452 FXYD6-FXYD2A0A087WZ82 144 aa6.13□□□□□ -1.43
CLDND1-227ENST00000513452 G3V3Q6 166 aa6.13□□□□□ -1.43
CLDND1-227ENST00000513452 RNASE13Q5GAN3 156 aaKnown RBP6.13□□□□□ -1.43
CLDND1-227ENST00000513452 MRPL52Q86TS9 123 aaKnown RBP6.13□□□□□ -1.43
CLDND1-227ENST00000513452 SFT2D1Q8WV19 159 aa6.13□□□□□ -1.43
CLDND1-227ENST00000513452 MRPL35Q9NZE8 188 aaKnown RBP6.13□□□□□ -1.43
CLDND1-227ENST00000513452 MUC17Q685J3 4493 aa6.12□□□□□ -1.43
CLDND1-227ENST00000513452 IGLV7-46A0A075B6I9 117 aa6.12□□□□□ -1.43
CLDND1-227ENST00000513452 TRAV13-1A0A0B4J241 112 aa6.12□□□□□ -1.43
CLDND1-227ENST00000513452 ZNF861PO60384 105 aa6.12□□□□□ -1.43
CLDND1-227ENST00000513452 C10orf25Q5T742 122 aa6.12□□□□□ -1.43
CLDND1-227ENST00000513452 C9orf62Q8N4C0 152 aa6.12□□□□□ -1.43
CLDND1-227ENST00000513452 KCNRGQ8N5I3 272 aa6.12□□□□□ -1.43
CLDND1-227ENST00000513452 ALG5Q9Y673 324 aa6.12□□□□□ -1.43
CLDND1-227ENST00000513452 CRYGAP11844 174 aa6.11□□□□□ -1.43
CLDND1-227ENST00000513452 FOXA3P55318 350 aaPredicted RBP6.11□□□□□ -1.43
CLDND1-227ENST00000513452 OR10D4PQ8NGN7 298 aa6.11□□□□□ -1.43
CLDND1-227ENST00000513452 FAM213BQ8TBF2 198 aa6.11□□□□□ -1.43
CLDND1-227ENST00000513452 ORAOV1Q8WV07 137 aa6.11□□□□□ -1.43
CLDND1-227ENST00000513452 CNFNQ9BYD5 112 aa6.11□□□□□ -1.43
CLDND1-227ENST00000513452 RNASE7Q9H1E1 156 aaKnown RBP6.11□□□□□ -1.43
CLDND1-227ENST00000513452 SMDT1Q9H4I9 107 aa6.11□□□□□ -1.43
CLDND1-227ENST00000513452 C7orf77A4D0Y5 90 aa6.1□□□□□ -1.43
CLDND1-227ENST00000513452 NDUFA1O15239 70 aa6.1□□□□□ -1.43
CLDND1-227ENST00000513452 TLX1NBP0CAT3 122 aa6.1□□□□□ -1.43
CLDND1-227ENST00000513452 TEX261Q6UWH6 196 aa6.1□□□□□ -1.43
CLDND1-227ENST00000513452 SMIM15Q7Z3B0 74 aa6.1□□□□□ -1.43
CLDND1-227ENST00000513452 C11orf52Q96A22 123 aa6.1□□□□□ -1.43
CLDND1-227ENST00000513452 C6orf48Q9UBA6 75 aa6.1□□□□□ -1.43
CLDND1-227ENST00000513452 TRBV6-5A0A0K0K1A5 114 aa6.09□□□□□ -1.43
CLDND1-227ENST00000513452 RAB19A4D1S5 217 aa6.09□□□□□ -1.43
CLDND1-227ENST00000513452 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.09□□□□□ -1.43
CLDND1-227ENST00000513452 GNG4P50150 75 aa6.09□□□□□ -1.43
CLDND1-227ENST00000513452 UNQ6190/PRO20217Q6UXQ8 127 aa6.09□□□□□ -1.43
CLDND1-227ENST00000513452 LINC00299Q6ZSB3 139 aa6.09□□□□□ -1.43
CLDND1-227ENST00000513452 LINC00173Q6ZV60 143 aa6.09□□□□□ -1.43
CLDND1-227ENST00000513452 MBD3L1Q8WWY6 194 aa6.09□□□□□ -1.43
CLDND1-227ENST00000513452 ST20Q9HBF5 79 aa6.09□□□□□ -1.43
CLDND1-227ENST00000513452 TMEM238LA0A1B0GVL6 79 aa6.08□□□□□ -1.44
CLDND1-227ENST00000513452 F8WDY8 70 aa6.08□□□□□ -1.44
CLDND1-227ENST00000513452 Q6ZUT4 128 aa6.08□□□□□ -1.44
CLDND1-227ENST00000513452 SMIM12Q96EX1 92 aa6.08□□□□□ -1.44
CLDND1-227ENST00000513452 CYTL1Q9NRR1 136 aa6.08□□□□□ -1.44
CLDND1-227ENST00000513452 GIPP09681 153 aaPredicted RBP6.07□□□□□ -1.44
CLDND1-227ENST00000513452 LINC00304Q8N9R0 145 aa6.07□□□□□ -1.44
CLDND1-227ENST00000513452 CTDSP1Q9GZU7 261 aa6.07□□□□□ -1.44
CLDND1-227ENST00000513452 ANAPC11Q9NYG5 84 aa6.07□□□□□ -1.44
CLDND1-227ENST00000513452 UBE2D4Q9Y2X8 147 aa6.07□□□□□ -1.44
CLDND1-227ENST00000513452 TRBV20OR9-2A0A075B6H5 130 aa6.06□□□□□ -1.44
CLDND1-227ENST00000513452 NUPR1O60356 82 aa6.06□□□□□ -1.44
CLDND1-227ENST00000513452 FCER1GP30273 86 aa6.06□□□□□ -1.44
CLDND1-227ENST00000513452 CCL20P78556 96 aa6.06□□□□□ -1.44
CLDND1-227ENST00000513452 TMEM241Q24JQ0 296 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms