RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 OR5AL1P0C617 328 aa4.98□□□□□ -1.61
CLCN3-208ENST00000512813 NTF3P20783 257 aa4.98□□□□□ -1.61
CLCN3-208ENST00000512813 SUMO1P63165 101 aaKnown RBP4.98□□□□□ -1.61
CLCN3-208ENST00000512813 Q6ZNX1 250 aa4.98□□□□□ -1.61
CLCN3-208ENST00000512813 TMEM101Q96IK0 257 aa4.98□□□□□ -1.61
CLCN3-208ENST00000512813 BTF3L4Q96K17 158 aa4.98□□□□□ -1.61
CLCN3-208ENST00000512813 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
CLCN3-208ENST00000512813 RBM38Q9H0Z9 239 aaKnown RBP4.98□□□□□ -1.61
CLCN3-208ENST00000512813 RAB26Q9ULW5 256 aa4.98□□□□□ -1.61
CLCN3-208ENST00000512813 C22orf24Q9Y442 160 aa4.98□□□□□ -1.61
CLCN3-208ENST00000512813 NCR2O95944 276 aa4.97□□□□□ -1.61
CLCN3-208ENST00000512813 MT1FP04733 61 aa4.97□□□□□ -1.61
CLCN3-208ENST00000512813 DEFA3P59666 94 aa4.97□□□□□ -1.61
CLCN3-208ENST00000512813 APCSP02743 223 aa4.96□□□□□ -1.62
CLCN3-208ENST00000512813 ARL14EPLP0DKL9 152 aa4.96□□□□□ -1.62
CLCN3-208ENST00000512813 UBE2AP49459 152 aa4.96□□□□□ -1.62
CLCN3-208ENST00000512813 NHLH2Q02577 135 aa4.96□□□□□ -1.62
CLCN3-208ENST00000512813 UNQ6190/PRO20217Q6UXQ8 127 aa4.96□□□□□ -1.62
CLCN3-208ENST00000512813 KMT2DO14686 5537 aa4.96□□□□□ -1.62
CLCN3-208ENST00000512813 C1orf196B1AJZ1 125 aa4.95□□□□□ -1.62
CLCN3-208ENST00000512813 AP3S2P59780 193 aa4.95□□□□□ -1.62
CLCN3-208ENST00000512813 LRRC37A5PQ49AS3 106 aa4.95□□□□□ -1.62
CLCN3-208ENST00000512813 C5orf38Q86SI9 138 aa4.95□□□□□ -1.62
CLCN3-208ENST00000512813 Q8N377 158 aa4.95□□□□□ -1.62
CLCN3-208ENST00000512813 CDC42SE2Q9NRR3 84 aa4.95□□□□□ -1.62
CLCN3-208ENST00000512813 TP73-AS1Q9UF72 201 aa4.95□□□□□ -1.62
CLCN3-208ENST00000512813 ZFP30Q9Y2G7 519 aa4.95□□□□□ -1.62
CLCN3-208ENST00000512813 ALG5Q9Y673 324 aa4.95□□□□□ -1.62
CLCN3-208ENST00000512813 A0A1W2PPV4 95 aa4.94□□□□□ -1.62
CLCN3-208ENST00000512813 NDUFC2-KCTD14E9PQ53 114 aa4.94□□□□□ -1.62
CLCN3-208ENST00000512813 HMGB3O15347 200 aaKnown RBP4.94□□□□□ -1.62
CLCN3-208ENST00000512813 SSTP61278 116 aa4.94□□□□□ -1.62
CLCN3-208ENST00000512813 RPS29P62273 56 aaKnown RBP4.94□□□□□ -1.62
CLCN3-208ENST00000512813 MRPL55Q7Z7F7 128 aaKnown RBP4.94□□□□□ -1.62
CLCN3-208ENST00000512813 Q8NBF4 154 aa4.94□□□□□ -1.62
CLCN3-208ENST00000512813 ORAOV1Q8WV07 137 aa4.94□□□□□ -1.62
CLCN3-208ENST00000512813 DEDD2Q8WXF8 326 aa4.94□□□□□ -1.62
CLCN3-208ENST00000512813 PACRGQ96M98 296 aaPredicted RBP4.94□□□□□ -1.62
CLCN3-208ENST00000512813 VCX3BQ9H321 246 aa4.94□□□□□ -1.62
CLCN3-208ENST00000512813 TOMM5Q8N4H5 51 aa4.93□□□□□ -1.62
CLCN3-208ENST00000512813 FUNDC2Q9BWH2 189 aa4.93□□□□□ -1.62
CLCN3-208ENST00000512813 FAM25EA8MYX2 175 aa4.92□□□□□ -1.62
CLCN3-208ENST00000512813 GCHFRP30047 84 aa4.92□□□□□ -1.62
CLCN3-208ENST00000512813 RAB32Q13637 225 aa4.92□□□□□ -1.62
CLCN3-208ENST00000512813 MRPL52Q86TS9 123 aaKnown RBP4.92□□□□□ -1.62
CLCN3-208ENST00000512813 CYTL1Q9NRR1 136 aa4.92□□□□□ -1.62
CLCN3-208ENST00000512813 PEX7O00628 323 aa4.91□□□□□ -1.62
CLCN3-208ENST00000512813 SLC25A20O43772 301 aa4.91□□□□□ -1.62
CLCN3-208ENST00000512813 NDUFB6O95139 128 aa4.91□□□□□ -1.62
CLCN3-208ENST00000512813 STAG3L2P0CL84 134 aa4.91□□□□□ -1.62
CLCN3-208ENST00000512813 STAG3L3P0CL85 134 aa4.91□□□□□ -1.62
CLCN3-208ENST00000512813 UBE2G2P60604 165 aa4.91□□□□□ -1.62
CLCN3-208ENST00000512813 TRBV30A0A0K0K1B3 111 aa4.9□□□□□ -1.63
CLCN3-208ENST00000512813 IL15RAQ13261 267 aa4.9□□□□□ -1.63
CLCN3-208ENST00000512813 A0A1W2PRE2 83 aa4.89□□□□□ -1.63
CLCN3-208ENST00000512813 RPL37AP8A6NKH3 93 aa4.89□□□□□ -1.63
CLCN3-208ENST00000512813 LTAP01374 205 aa4.89□□□□□ -1.63
CLCN3-208ENST00000512813 CDC34P49427 236 aaPredicted RBP4.89□□□□□ -1.63
CLCN3-208ENST00000512813 KRTAP10-10P60014 251 aa4.89□□□□□ -1.63
CLCN3-208ENST00000512813 PLEKHB2Q96CS7 222 aa4.89□□□□□ -1.63
CLCN3-208ENST00000512813 FMC1Q96HJ9 113 aa4.89□□□□□ -1.63
CLCN3-208ENST00000512813 VCX3AQ9NNX9 186 aa4.89□□□□□ -1.63
CLCN3-208ENST00000512813 TMEM167BQ9NRX6 74 aa4.89□□□□□ -1.63
CLCN3-208ENST00000512813 Q6Q795 121 aa4.88□□□□□ -1.63
CLCN3-208ENST00000512813 LYZL1Q6UWQ5 148 aa4.88□□□□□ -1.63
CLCN3-208ENST00000512813 HIST1H2BAQ96A08 127 aa4.88□□□□□ -1.63
CLCN3-208ENST00000512813 MRAP2Q96G30 205 aa4.88□□□□□ -1.63
CLCN3-208ENST00000512813 LINC00167Q96N53 147 aa4.88□□□□□ -1.63
CLCN3-208ENST00000512813 GPR98Q8WXG9 6306 aa4.88□□□□□ -1.63
CLCN3-208ENST00000512813 TRAV13-1A0A0B4J241 112 aa4.87□□□□□ -1.63
CLCN3-208ENST00000512813 UBE2G1P62253 170 aa4.87□□□□□ -1.63
CLCN3-208ENST00000512813 PRLHP81277 87 aa4.87□□□□□ -1.63
CLCN3-208ENST00000512813 LCE4AQ5TA78 99 aa4.87□□□□□ -1.63
CLCN3-208ENST00000512813 MARVELD1Q9BSK0 173 aa4.87□□□□□ -1.63
CLCN3-208ENST00000512813 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
CLCN3-208ENST00000512813 KRTAP5-9P26371 169 aa4.86□□□□□ -1.63
CLCN3-208ENST00000512813 PNRC1Q12796 327 aaPredicted RBP4.86□□□□□ -1.63
CLCN3-208ENST00000512813 KIAA0087Q14695 138 aa4.86□□□□□ -1.63
CLCN3-208ENST00000512813 SCGB1C1Q8TD33 95 aa4.86□□□□□ -1.63
CLCN3-208ENST00000512813 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
CLCN3-208ENST00000512813 Q9H521 79 aa4.86□□□□□ -1.63
CLCN3-208ENST00000512813 XAGE1AQ9HD64 81 aa4.86□□□□□ -1.63
CLCN3-208ENST00000512813 SDHAF1A6NFY7 115 aa4.85□□□□□ -1.63
CLCN3-208ENST00000512813 C9orf92A6NGG3 77 aa4.85□□□□□ -1.63
CLCN3-208ENST00000512813 ZNF727A8MUV8 499 aa4.85□□□□□ -1.63
CLCN3-208ENST00000512813 UPK1BO75841 260 aa4.85□□□□□ -1.63
CLCN3-208ENST00000512813 CXorf1O96002 111 aa4.85□□□□□ -1.63
CLCN3-208ENST00000512813 TRGC1P0CF51 173 aa4.85□□□□□ -1.63
CLCN3-208ENST00000512813 LINC00469Q8N7U9 141 aa4.85□□□□□ -1.63
CLCN3-208ENST00000512813 GATD1Q8NB37 220 aa4.85□□□□□ -1.63
CLCN3-208ENST00000512813 RAB24Q969Q5 203 aa4.85□□□□□ -1.63
CLCN3-208ENST00000512813 IGHV3OR16-9A0A0B4J2B5 98 aa4.84□□□□□ -1.63
CLCN3-208ENST00000512813 I3L3M4 83 aa4.84□□□□□ -1.63
CLCN3-208ENST00000512813 IGLC6P0CF74 106 aa4.84□□□□□ -1.63
CLCN3-208ENST00000512813 LGALS3P17931 250 aaKnown RBP4.84□□□□□ -1.63
CLCN3-208ENST00000512813 FOXA3P55318 350 aaPredicted RBP4.84□□□□□ -1.63
CLCN3-208ENST00000512813 RNASE13Q5GAN3 156 aaKnown RBP4.84□□□□□ -1.63
CLCN3-208ENST00000512813 RPL39LQ96EH5 51 aaKnown RBP4.84□□□□□ -1.63
CLCN3-208ENST00000512813 SPRR4Q96PI1 79 aa4.84□□□□□ -1.63
CLCN3-208ENST00000512813 MZT2BQ6NZ67 158 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms