RNA–Protein interactions for RNA: ENST00000512789.5

GYPA-209, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-209ENST00000512789 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.26□□□□□ -2.37
GYPA-209ENST00000512789 LPAR5Q9H1C0 372 aa0.26□□□□□ -2.37
GYPA-209ENST00000512789 NAT8BQ9UHF3 227 aa0.26□□□□□ -2.37
GYPA-209ENST00000512789 MYH6P13533 1939 aa0.26□□□□□ -2.37
GYPA-209ENST00000512789 KPNA4O00629 521 aaPredicted RBP0.25□□□□□ -2.37
GYPA-209ENST00000512789 PFDN1O60925 122 aa0.25□□□□□ -2.37
GYPA-209ENST00000512789 STATHP02808 62 aa0.25□□□□□ -2.37
GYPA-209ENST00000512789 SMR3BP02814 79 aaPredicted RBP0.25□□□□□ -2.37
GYPA-209ENST00000512789 HAMPP81172 84 aa0.25□□□□□ -2.37
GYPA-209ENST00000512789 ISOC1Q96CN7 298 aa0.25□□□□□ -2.37
GYPA-209ENST00000512789 PLEKHB2Q96CS7 222 aa0.25□□□□□ -2.37
GYPA-209ENST00000512789 LIMD2Q9BT23 127 aa0.25□□□□□ -2.37
GYPA-209ENST00000512789 SS18L2Q9UHA2 77 aa0.25□□□□□ -2.37
GYPA-209ENST00000512789 LY6G6CO95867 125 aa0.24□□□□□ -2.37
GYPA-209ENST00000512789 IGHV3-30P01768 117 aa0.24□□□□□ -2.37
GYPA-209ENST00000512789 TRACP01848 142 aa0.24□□□□□ -2.37
GYPA-209ENST00000512789 IGHV3-30-5P0DP03 117 aa0.24□□□□□ -2.37
GYPA-209ENST00000512789 RPS3P23396 243 aaKnown RBP eCLIP0.24□□□□□ -2.373e-8■■■□□ 17.8
GYPA-209ENST00000512789 UBA52P62987 128 aaKnown RBP0.24□□□□□ -2.37
GYPA-209ENST00000512789 KRTAP20-2Q3LI61 65 aa0.24□□□□□ -2.37
GYPA-209ENST00000512789 MRPL40Q9NQ50 206 aaKnown RBP0.24□□□□□ -2.37
GYPA-209ENST00000512789 ASB4Q9Y574 426 aa0.24□□□□□ -2.37
GYPA-209ENST00000512789 NINQ8N4C6 2090 aa0.24□□□□□ -2.37
GYPA-209ENST00000512789 BBIP1A8MTZ0 92 aa0.23□□□□□ -2.37
GYPA-209ENST00000512789 DEFB108AA8MXU0 73 aa0.23□□□□□ -2.37
GYPA-209ENST00000512789 MT1FP04733 61 aa0.23□□□□□ -2.37
GYPA-209ENST00000512789 GYPBP06028 91 aa0.23□□□□□ -2.37
GYPA-209ENST00000512789 NDUFA6P56556 154 aa0.23□□□□□ -2.37
GYPA-209ENST00000512789 GNG3P63215 75 aa0.23□□□□□ -2.37
GYPA-209ENST00000512789 BASP1P80723 227 aaKnown RBP0.23□□□□□ -2.37
GYPA-209ENST00000512789 XAF1Q6GPH4 301 aa0.23□□□□□ -2.37
GYPA-209ENST00000512789 C3orf62Q6ZUJ4 267 aa0.23□□□□□ -2.37
GYPA-209ENST00000512789 LINC00269Q8N2A0 174 aa0.23□□□□□ -2.37
GYPA-209ENST00000512789 STX19Q8N4C7 294 aa0.23□□□□□ -2.37
GYPA-209ENST00000512789 BORCS8Q96FH0 119 aa0.23□□□□□ -2.37
GYPA-209ENST00000512789 SPRR2FQ96RM1 72 aa0.23□□□□□ -2.37
GYPA-209ENST00000512789 MED11Q9P086 117 aa0.23□□□□□ -2.37
GYPA-209ENST00000512789 TANC2Q9HCD6 1990 aa0.23□□□□□ -2.37
GYPA-209ENST00000512789 ANKRD36A6QL64 1941 aa0.23□□□□□ -2.37
GYPA-209ENST00000512789 C3orf85A0A1B0GTC6 90 aa0.22□□□□□ -2.37
GYPA-209ENST00000512789 ARL5CA6NH57 179 aa0.22□□□□□ -2.37
GYPA-209ENST00000512789 MT2AP02795 61 aa0.22□□□□□ -2.37
GYPA-209ENST00000512789 DEFB121Q5J5C9 76 aa0.22□□□□□ -2.37
GYPA-209ENST00000512789 ZCCHC23Q6ZST2 131 aa0.22□□□□□ -2.37
GYPA-209ENST00000512789 FAM24BQ8N5W8 94 aa0.22□□□□□ -2.37
GYPA-209ENST00000512789 WFDC9Q8NEX5 89 aa0.22□□□□□ -2.37
GYPA-209ENST00000512789 AP3S1Q92572 193 aa0.22□□□□□ -2.37
GYPA-209ENST00000512789 CIB3Q96Q77 187 aaPredicted RBP0.22□□□□□ -2.37
GYPA-209ENST00000512789 BIN3Q9NQY0 253 aa0.22□□□□□ -2.37
GYPA-209ENST00000512789 CSN2P05814 226 aa0.21□□□□□ -2.38
GYPA-209ENST00000512789 FABP2P12104 132 aa0.21□□□□□ -2.38
GYPA-209ENST00000512789 TPT1P13693 172 aaKnown RBP0.21□□□□□ -2.38
GYPA-209ENST00000512789 HMGA1P17096 107 aaKnown RBP0.21□□□□□ -2.38
GYPA-209ENST00000512789 EVI2AP22794 236 aa0.21□□□□□ -2.38
GYPA-209ENST00000512789 SNRPD3P62318 126 aaKnown RBP0.21□□□□□ -2.38
GYPA-209ENST00000512789 NUBP2Q9Y5Y2 271 aa0.21□□□□□ -2.38
GYPA-209ENST00000512789 MFSD11O43934 449 aa0.2□□□□□ -2.38
GYPA-209ENST00000512789 SAA1P0DJI8 122 aaPredicted RBP0.2□□□□□ -2.38
GYPA-209ENST00000512789 DNAJB13P59910 316 aa0.2□□□□□ -2.38
GYPA-209ENST00000512789 DEFB133Q30KQ1 61 aa0.2□□□□□ -2.38
GYPA-209ENST00000512789 IZUMO2Q6UXV1 221 aa0.2□□□□□ -2.38
GYPA-209ENST00000512789 OR5H6Q8NGV6 325 aa0.2□□□□□ -2.38
GYPA-209ENST00000512789 DYDC1Q8WWB3 177 aa0.2□□□□□ -2.38
GYPA-209ENST00000512789 TAS2R41P59536 307 aa0.19□□□□□ -2.38
GYPA-209ENST00000512789 LTC4SQ16873 150 aa0.19□□□□□ -2.38
GYPA-209ENST00000512789 CCSMST1Q4G0I0 132 aa0.19□□□□□ -2.38
GYPA-209ENST00000512789 SMIM20Q8N5G0 67 aa0.19□□□□□ -2.38
GYPA-209ENST00000512789 TCTEX1D1Q8N7M0 179 aa0.19□□□□□ -2.38
GYPA-209ENST00000512789 TMEM229BQ8NBD8 167 aa0.19□□□□□ -2.38
GYPA-209ENST00000512789 CCL4L1Q8NHW4 92 aa0.19□□□□□ -2.38
GYPA-209ENST00000512789 DIRC1Q969H9 104 aa0.19□□□□□ -2.38
GYPA-209ENST00000512789 PRELID3AQ96N28 172 aa0.19□□□□□ -2.38
GYPA-209ENST00000512789 DDA1Q9BW61 102 aa0.19□□□□□ -2.38
GYPA-209ENST00000512789 IL20Q9NYY1 176 aa0.19□□□□□ -2.38
GYPA-209ENST00000512789 LAMTOR2Q9Y2Q5 125 aa0.19□□□□□ -2.38
GYPA-209ENST00000512789 A0A1W2PPB8 328 aa0.18□□□□□ -2.38
GYPA-209ENST00000512789 A0A1W2PRS3 328 aa0.18□□□□□ -2.38
GYPA-209ENST00000512789 KIR3DP1A8MWS1 328 aa0.18□□□□□ -2.38
GYPA-209ENST00000512789 CD3DP04234 171 aa0.18□□□□□ -2.38
GYPA-209ENST00000512789 SERPINB1P30740 379 aa0.18□□□□□ -2.38
GYPA-209ENST00000512789 SDC2P34741 201 aa0.18□□□□□ -2.38
GYPA-209ENST00000512789 LSM3P62310 102 aaKnown RBP0.18□□□□□ -2.38
GYPA-209ENST00000512789 DSPPQ9NZW4 1301 aa0.17□□□□□ -2.38
GYPA-209ENST00000512789 LOC107986453A0A1B0GWG9 222 aa0.17□□□□□ -2.38
GYPA-209ENST00000512789 TRDV1A0A1B0GX56 115 aa0.17□□□□□ -2.38
GYPA-209ENST00000512789 CLPSL1A2RUU4 121 aa0.17□□□□□ -2.38
GYPA-209ENST00000512789 GLRXP35754 106 aa0.17□□□□□ -2.38
GYPA-209ENST00000512789 MAXP61244 160 aa0.17□□□□□ -2.38
GYPA-209ENST00000512789 GLYATL3Q5SZD4 288 aa0.17□□□□□ -2.38
GYPA-209ENST00000512789 C3orf33Q6P1S2 294 aa0.17□□□□□ -2.38
GYPA-209ENST00000512789 DEFB104AQ8WTQ1 72 aa0.17□□□□□ -2.38
GYPA-209ENST00000512789 CLEC2BQ92478 149 aa0.17□□□□□ -2.38
GYPA-209ENST00000512789 OTORQ9NRC9 128 aa0.17□□□□□ -2.38
GYPA-209ENST00000512789 MRPL35Q9NZE8 188 aaKnown RBP0.17□□□□□ -2.38
GYPA-209ENST00000512789 APLNQ9ULZ1 77 aa0.17□□□□□ -2.38
GYPA-209ENST00000512789 GINS2Q9Y248 185 aa0.17□□□□□ -2.38
GYPA-209ENST00000512789 UFC1Q9Y3C8 167 aa0.17□□□□□ -2.38
GYPA-209ENST00000512789 PLIN4Q96Q06 1357 aa0.17□□□□□ -2.38
GYPA-209ENST00000512789 SPTY2D1-AS1A0A0U1RR47 76 aa0.16□□□□□ -2.38
GYPA-209ENST00000512789 BCL2P10415 239 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms