RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 GATD1Q8NB37 220 aa7.54□□□□□ -1.2
DDX41-215ENST00000512431 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.53□□□□□ -1.2
DDX41-215ENST00000512431 TSPAN13O95857 204 aa7.53□□□□□ -1.2
DDX41-215ENST00000512431 IFNA1P01562 189 aa7.53□□□□□ -1.2
DDX41-215ENST00000512431 KRTAP1-4P0C5Y4 121 aa7.53□□□□□ -1.2
DDX41-215ENST00000512431 PMCHP20382 165 aa7.53□□□□□ -1.2
DDX41-215ENST00000512431 RPL35P42766 123 aaKnown RBP7.53□□□□□ -1.2
DDX41-215ENST00000512431 MEF2BQ02080 365 aaPredicted RBP7.53□□□□□ -1.2
DDX41-215ENST00000512431 TWIST1Q15672 202 aa7.53□□□□□ -1.2
DDX41-215ENST00000512431 SFT2D1Q8WV19 159 aa7.53□□□□□ -1.2
DDX41-215ENST00000512431 COX7A2LO14548 114 aa7.52□□□□□ -1.21
DDX41-215ENST00000512431 C2orf48Q96LS8 159 aa7.52□□□□□ -1.21
DDX41-215ENST00000512431 CARHSP1Q9Y2V2 147 aaKnown RBP7.52□□□□□ -1.21
DDX41-215ENST00000512431 A0A1B0GV50 99 aa7.51□□□□□ -1.21
DDX41-215ENST00000512431 I3L3M4 83 aa7.51□□□□□ -1.21
DDX41-215ENST00000512431 TEX261Q6UWH6 196 aa7.51□□□□□ -1.21
DDX41-215ENST00000512431 SMIM15Q7Z3B0 74 aa7.51□□□□□ -1.21
DDX41-215ENST00000512431 RPL39LQ96EH5 51 aaKnown RBP7.51□□□□□ -1.21
DDX41-215ENST00000512431 OPRPNQ99935 248 aaPredicted RBP7.51□□□□□ -1.21
DDX41-215ENST00000512431 C19orf71A6NCJ1 209 aa7.5□□□□□ -1.21
DDX41-215ENST00000512431 SDHAF1A6NFY7 115 aa7.5□□□□□ -1.21
DDX41-215ENST00000512431 C1orf196B1AJZ1 125 aa7.5□□□□□ -1.21
DDX41-215ENST00000512431 RNF151Q2KHN1 245 aa7.5□□□□□ -1.21
DDX41-215ENST00000512431 MRAP2Q96G30 205 aa7.5□□□□□ -1.21
DDX41-215ENST00000512431 CDC42SE2Q9NRR3 84 aa7.5□□□□□ -1.21
DDX41-215ENST00000512431 ESDP10768 282 aa7.49□□□□□ -1.21
DDX41-215ENST00000512431 UBE2BP63146 152 aa7.49□□□□□ -1.21
DDX41-215ENST00000512431 CENPWQ5EE01 88 aa7.49□□□□□ -1.21
DDX41-215ENST00000512431 FAM213BQ8TBF2 198 aa7.49□□□□□ -1.21
DDX41-215ENST00000512431 MBD3L1Q8WWY6 194 aa7.49□□□□□ -1.21
DDX41-215ENST00000512431 FAM210AQ96ND0 272 aa7.49□□□□□ -1.21
DDX41-215ENST00000512431 IMMP2LQ96T52 175 aa7.49□□□□□ -1.21
DDX41-215ENST00000512431 SLC51BQ86UW2 128 aa7.48□□□□□ -1.21
DDX41-215ENST00000512431 BIN3Q9NQY0 253 aa7.48□□□□□ -1.21
DDX41-215ENST00000512431 CTRLP40313 264 aa7.47□□□□□ -1.21
DDX41-215ENST00000512431 GNG4P50150 75 aa7.47□□□□□ -1.21
DDX41-215ENST00000512431 SPAG11BQ08648 103 aa7.47□□□□□ -1.21
DDX41-215ENST00000512431 FAM19A5Q7Z5A7 132 aaPredicted RBP7.47□□□□□ -1.21
DDX41-215ENST00000512431 MRPL52Q86TS9 123 aaKnown RBP7.47□□□□□ -1.21
DDX41-215ENST00000512431 KRTAP11-1Q8IUC1 163 aa7.47□□□□□ -1.21
DDX41-215ENST00000512431 SMIM12Q96EX1 92 aa7.47□□□□□ -1.21
DDX41-215ENST00000512431 FAM168BA1KXE4 195 aa7.46□□□□□ -1.22
DDX41-215ENST00000512431 UMAD1C9J7I0 102 aa7.46□□□□□ -1.22
DDX41-215ENST00000512431 F8WDY8 70 aa7.45□□□□□ -1.22
DDX41-215ENST00000512431 H2AFB1P0C5Y9 115 aa7.45□□□□□ -1.22
DDX41-215ENST00000512431 SMAGPQ0VAQ4 97 aa7.45□□□□□ -1.22
DDX41-215ENST00000512431 ALKAL2Q6UX46 152 aa7.45□□□□□ -1.22
DDX41-215ENST00000512431 C5orf38Q86SI9 138 aa7.45□□□□□ -1.22
DDX41-215ENST00000512431 C11orf52Q96A22 123 aa7.45□□□□□ -1.22
DDX41-215ENST00000512431 CNFNQ9BYD5 112 aa7.45□□□□□ -1.22
DDX41-215ENST00000512431 CDIP1Q9H305 208 aa7.45□□□□□ -1.22
DDX41-215ENST00000512431 ST20Q9HBF5 79 aa7.45□□□□□ -1.22
DDX41-215ENST00000512431 TMEM242Q9NWH2 141 aa7.45□□□□□ -1.22
DDX41-215ENST00000512431 MRPL35Q9NZE8 188 aaKnown RBP7.45□□□□□ -1.22
DDX41-215ENST00000512431 TRBV6-5A0A0K0K1A5 114 aa7.44□□□□□ -1.22
DDX41-215ENST00000512431 RAB19A4D1S5 217 aa7.44□□□□□ -1.22
DDX41-215ENST00000512431 TSHBP01222 138 aa7.44□□□□□ -1.22
DDX41-215ENST00000512431 CCL20P78556 96 aa7.44□□□□□ -1.22
DDX41-215ENST00000512431 TMEM241Q24JQ0 296 aa7.44□□□□□ -1.22
DDX41-215ENST00000512431 OR10D4PQ8NGN7 298 aa7.44□□□□□ -1.22
DDX41-215ENST00000512431 MANBALQ9NQG1 85 aa7.44□□□□□ -1.22
DDX41-215ENST00000512431 TRAV13-1A0A0B4J241 112 aa7.43□□□□□ -1.22
DDX41-215ENST00000512431 C7orf77A4D0Y5 90 aa7.43□□□□□ -1.22
DDX41-215ENST00000512431 M0QXV9 152 aa7.43□□□□□ -1.22
DDX41-215ENST00000512431 NDUFA1O15239 70 aa7.43□□□□□ -1.22
DDX41-215ENST00000512431 NUDT10Q8NFP7 164 aa7.43□□□□□ -1.22
DDX41-215ENST00000512431 NUDT11Q96G61 164 aa7.43□□□□□ -1.22
DDX41-215ENST00000512431 GNG13Q9P2W3 67 aa7.43□□□□□ -1.22
DDX41-215ENST00000512431 CRCT1Q9UGL9 99 aa7.43□□□□□ -1.22
DDX41-215ENST00000512431 FOXA3P55318 350 aaPredicted RBP7.42□□□□□ -1.22
DDX41-215ENST00000512431 GAGE2EQ4V326 116 aa7.42□□□□□ -1.22
DDX41-215ENST00000512431 LCE2DQ5TA82 110 aaPredicted RBP7.42□□□□□ -1.22
DDX41-215ENST00000512431 TYMSOSQ8TAI1 123 aa7.42□□□□□ -1.22
DDX41-215ENST00000512431 GAGE2DQ9UEU5 116 aa7.42□□□□□ -1.22
DDX41-215ENST00000512431 FSIP2Q5CZC0 6907 aa7.41□□□□□ -1.22
DDX41-215ENST00000512431 ZNF861PO60384 105 aa7.41□□□□□ -1.22
DDX41-215ENST00000512431 TLX1NBP0CAT3 122 aa7.41□□□□□ -1.22
DDX41-215ENST00000512431 ORAOV1Q8WV07 137 aa7.41□□□□□ -1.22
DDX41-215ENST00000512431 RPP21Q9H633 154 aaKnown RBP7.41□□□□□ -1.22
DDX41-215ENST00000512431 CSDC2Q9Y534 153 aaKnown RBP7.41□□□□□ -1.22
DDX41-215ENST00000512431 CRYGAP11844 174 aa7.4□□□□□ -1.22
DDX41-215ENST00000512431 FCER1GP30273 86 aa7.4□□□□□ -1.22
DDX41-215ENST00000512431 IFITM2Q01629 132 aa7.4□□□□□ -1.22
DDX41-215ENST00000512431 RNASE13Q5GAN3 156 aaKnown RBP7.4□□□□□ -1.22
DDX41-215ENST00000512431 MED9Q9NWA0 146 aa7.4□□□□□ -1.22
DDX41-215ENST00000512431 TRBV27A0A0K0K1C4 114 aa7.39□□□□□ -1.23
DDX41-215ENST00000512431 PDE6DO43924 150 aa7.39□□□□□ -1.23
DDX41-215ENST00000512431 RNASE7Q9H1E1 156 aaKnown RBP7.39□□□□□ -1.23
DDX41-215ENST00000512431 SMDT1Q9H4I9 107 aa7.39□□□□□ -1.23
DDX41-215ENST00000512431 TEX46H3BTG2 121 aa7.38□□□□□ -1.23
DDX41-215ENST00000512431 NUPR1O60356 82 aa7.38□□□□□ -1.23
DDX41-215ENST00000512431 POLR2KP53803 58 aaKnown RBP7.38□□□□□ -1.23
DDX41-215ENST00000512431 LINC01547P58512 204 aaPredicted RBP7.38□□□□□ -1.23
DDX41-215ENST00000512431 TPRXLQ17RH7 258 aa7.38□□□□□ -1.23
DDX41-215ENST00000512431 UNQ6190/PRO20217Q6UXQ8 127 aa7.38□□□□□ -1.23
DDX41-215ENST00000512431 UBE2D4Q9Y2X8 147 aa7.38□□□□□ -1.23
DDX41-215ENST00000512431 TRBV20OR9-2A0A075B6H5 130 aa7.37□□□□□ -1.23
DDX41-215ENST00000512431 VCYO14598 125 aa7.37□□□□□ -1.23
DDX41-215ENST00000512431 C10orf25Q5T742 122 aa7.37□□□□□ -1.23
DDX41-215ENST00000512431 TMEM18Q96B42 140 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms