RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 K7EP13 123 aa4.72□□□□□ -1.65
TOPBP1-207ENST00000509162 NPYP01303 97 aa4.72□□□□□ -1.65
TOPBP1-207ENST00000509162 ESDP10768 282 aa4.72□□□□□ -1.65
TOPBP1-207ENST00000509162 C10orf91Q5T1B1 145 aa4.72□□□□□ -1.65
TOPBP1-207ENST00000509162 Q8N1X5 172 aa4.72□□□□□ -1.65
TOPBP1-207ENST00000509162 Q8N814 137 aa4.72□□□□□ -1.65
TOPBP1-207ENST00000509162 CHCHD5Q9BSY4 110 aa4.72□□□□□ -1.65
TOPBP1-207ENST00000509162 TRBV25-1A0A075B6N4 114 aa4.71□□□□□ -1.66
TOPBP1-207ENST00000509162 H7C1H1 209 aa4.71□□□□□ -1.66
TOPBP1-207ENST00000509162 RAB14P61106 215 aa4.71□□□□□ -1.66
TOPBP1-207ENST00000509162 RIGQ13278 110 aa4.71□□□□□ -1.66
TOPBP1-207ENST00000509162 LINC01620Q4KN68 170 aa4.71□□□□□ -1.66
TOPBP1-207ENST00000509162 NFE4Q86UQ8 179 aa4.71□□□□□ -1.66
TOPBP1-207ENST00000509162 BAALCQ8WXS3 180 aa4.71□□□□□ -1.66
TOPBP1-207ENST00000509162 TMEM243Q9BU79 118 aa4.71□□□□□ -1.66
TOPBP1-207ENST00000509162 IGKV2D-24A0A075B6R9 120 aa4.7□□□□□ -1.66
TOPBP1-207ENST00000509162 TRAV9-2A0A087WT02 112 aa4.7□□□□□ -1.66
TOPBP1-207ENST00000509162 A0A087WX48 190 aa4.7□□□□□ -1.66
TOPBP1-207ENST00000509162 TRBV27A0A0K0K1C4 114 aa4.7□□□□□ -1.66
TOPBP1-207ENST00000509162 D6R8Y8 96 aa4.7□□□□□ -1.66
TOPBP1-207ENST00000509162 AMTP48728 403 aa4.7□□□□□ -1.66
TOPBP1-207ENST00000509162 XGP55808 180 aa4.7□□□□□ -1.66
TOPBP1-207ENST00000509162 HBBP68871 147 aa4.7□□□□□ -1.66
TOPBP1-207ENST00000509162 PNRC1Q12796 327 aaPredicted RBP4.7□□□□□ -1.66
TOPBP1-207ENST00000509162 COTL1Q14019 142 aa4.7□□□□□ -1.66
TOPBP1-207ENST00000509162 UQCC3Q6UW78 93 aa4.7□□□□□ -1.66
TOPBP1-207ENST00000509162 LINC00269Q8N2A0 174 aa4.7□□□□□ -1.66
TOPBP1-207ENST00000509162 FRZBQ92765 325 aa4.7□□□□□ -1.66
TOPBP1-207ENST00000509162 MRAP2Q96G30 205 aa4.7□□□□□ -1.66
TOPBP1-207ENST00000509162 CARHSP1Q9Y2V2 147 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-207ENST00000509162 HMCN2Q8NDA2 5059 aa4.69□□□□□ -1.66
TOPBP1-207ENST00000509162 IGLV10-54A0A075B6I4 117 aa4.69□□□□□ -1.66
TOPBP1-207ENST00000509162 TMEM262E9PQX1 116 aa4.69□□□□□ -1.66
TOPBP1-207ENST00000509162 APCSP02743 223 aa4.69□□□□□ -1.66
TOPBP1-207ENST00000509162 ANGP03950 147 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-207ENST00000509162 TMEM136Q6ZRR5 245 aa4.69□□□□□ -1.66
TOPBP1-207ENST00000509162 ATP5L2Q7Z4Y8 100 aa4.69□□□□□ -1.66
TOPBP1-207ENST00000509162 SEC11CQ9BY50 192 aa4.69□□□□□ -1.66
TOPBP1-207ENST00000509162 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 TRBV24-1A0A075B6N3 115 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 TRAV8-3A0A0A6YYJ7 113 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 A0A1B0GUV1 79 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 F8W036 122 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 PANO1I0J062 215 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 I3L3M4 83 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 CDK2AP2O75956 126 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 SLPIP03973 132 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 FGF6P10767 208 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 REG3AQ06141 175 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 TMEM97Q5BJF2 176 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 Q6ZSA8 131 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 Q6ZUT4 128 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 C15orf56Q8N910 161 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 BORCS7Q96B45 105 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 SMIM2Q9BVW6 85 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 ST20Q9HBF5 79 aa4.68□□□□□ -1.66
TOPBP1-207ENST00000509162 TNXBP22105 4242 aa4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 C7orf77A4D0Y5 90 aa4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 PPP1R2P9O14990 202 aa4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 PSCAO43653 123 aa4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 HLA-DQA1P01909 254 aa4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 PRSS1P07477 247 aa4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 RPL39P62891 51 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 RPL32P62910 135 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 MIAQ16674 131 aa4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 RNASE13Q5GAN3 156 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 SMIM15Q7Z3B0 74 aa4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 MRPL52Q86TS9 123 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 YPEL4Q96NS1 127 aa4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 IMMP2LQ96T52 175 aa4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 UBE2D4Q9Y2X8 147 aa4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 URGCP-MRPS24S4R325 110 aa4.67□□□□□ -1.66
TOPBP1-207ENST00000509162 IGLV5-52A0A0A0MRZ9 124 aa4.66□□□□□ -1.66
TOPBP1-207ENST00000509162 A0A1B0GW15 77 aa4.66□□□□□ -1.66
TOPBP1-207ENST00000509162 TCAPO15273 167 aa4.66□□□□□ -1.66
TOPBP1-207ENST00000509162 CRPP02741 224 aa4.66□□□□□ -1.66
TOPBP1-207ENST00000509162 MT-ND4LP03901 98 aa4.66□□□□□ -1.66
TOPBP1-207ENST00000509162 PMCHP20382 165 aa4.66□□□□□ -1.66
TOPBP1-207ENST00000509162 KCNIP4Q6PIL6 250 aa4.66□□□□□ -1.66
TOPBP1-207ENST00000509162 IGKV3OR2-268A0A0C4DH90 116 aa4.65□□□□□ -1.67
TOPBP1-207ENST00000509162 CKS2P33552 79 aa4.65□□□□□ -1.67
TOPBP1-207ENST00000509162 Q0VG73 95 aa4.65□□□□□ -1.67
TOPBP1-207ENST00000509162 PRELID3AQ96N28 172 aa4.65□□□□□ -1.67
TOPBP1-207ENST00000509162 OPRPNQ99935 248 aaPredicted RBP4.65□□□□□ -1.67
TOPBP1-207ENST00000509162 C20orf78Q9BR46 151 aa4.65□□□□□ -1.67
TOPBP1-207ENST00000509162 CDC42SE2Q9NRR3 84 aa4.65□□□□□ -1.67
TOPBP1-207ENST00000509162 TGIF2-C20orf24A0A0A6YYL0 155 aa4.64□□□□□ -1.67
TOPBP1-207ENST00000509162 KRTAP10-4P60372 401 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-207ENST00000509162 PKIAP61925 76 aa4.64□□□□□ -1.67
TOPBP1-207ENST00000509162 ELOBQ15370 118 aa4.64□□□□□ -1.67
TOPBP1-207ENST00000509162 KIAA1644Q3SXP7 199 aa4.64□□□□□ -1.67
TOPBP1-207ENST00000509162 ZC2HC1BQ5TFG8 222 aa4.64□□□□□ -1.67
TOPBP1-207ENST00000509162 RNASEKQ6P5S7 137 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-207ENST00000509162 LINC00173Q6ZV60 143 aa4.64□□□□□ -1.67
TOPBP1-207ENST00000509162 ORMDL3Q8N138 153 aa4.64□□□□□ -1.67
TOPBP1-207ENST00000509162 CHCHD10Q8WYQ3 142 aaPredicted RBP4.64□□□□□ -1.67
TOPBP1-207ENST00000509162 URB1-AS1Q96HZ7 61 aa4.64□□□□□ -1.67
TOPBP1-207ENST00000509162 BTF3L4Q96K17 158 aa4.64□□□□□ -1.67
TOPBP1-207ENST00000509162 SRRM2Q9UQ35 2752 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-207ENST00000509162 LINC00959A0A1B0GUT2 108 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms