RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 RHOHQ15669 191 aa3.44□□□□□ -1.86
FXN-205ENST00000498653 MRPL51Q4U2R6 128 aaKnown RBP3.44□□□□□ -1.86
FXN-205ENST00000498653 Q6ZRU5 148 aa3.44□□□□□ -1.86
FXN-205ENST00000498653 SCXQ7RTU7 201 aa3.44□□□□□ -1.86
FXN-205ENST00000498653 SLC25A29Q8N8R3 303 aa3.44□□□□□ -1.86
FXN-205ENST00000498653 TRAPPC1Q9Y5R8 145 aa3.44□□□□□ -1.86
FXN-205ENST00000498653 TNFRSF18Q9Y5U5 241 aa3.44□□□□□ -1.86
FXN-205ENST00000498653 LOC100131303A0A0U1RQF7 123 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 GAGE12JA6NER3 117 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 D6R8Y8 96 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 SMKR1H3BMG3 65 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 H3BNG1 76 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 NCR2O95944 276 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 RPL36AP83881 106 aaKnown RBP3.43□□□□□ -1.86
FXN-205ENST00000498653 GAGE1Q13065 139 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 GAGE4Q13068 117 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 GAGE5Q13069 117 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 MRPL23Q16540 153 aaKnown RBP3.43□□□□□ -1.86
FXN-205ENST00000498653 KIAA1644Q3SXP7 199 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 TTC32Q5I0X7 151 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 OR10J3Q5JRS4 329 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 SH2D6Q7Z4S9 175 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 ORMDL3Q8N138 153 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.43□□□□□ -1.86
FXN-205ENST00000498653 NEXN-AS1Q8NBZ9 246 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 RPL36ALQ969Q0 106 aaKnown RBP3.43□□□□□ -1.86
FXN-205ENST00000498653 VSIG2Q96IQ7 327 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 DNAJC30Q96LL9 226 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 PRELID3AQ96N28 172 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 ST20Q9HBF5 79 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 NIT2Q9NQR4 276 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 ICOSQ9Y6W8 199 aa3.43□□□□□ -1.86
FXN-205ENST00000498653 TRBV7-3A0A075B6L6 115 aa3.42□□□□□ -1.86
FXN-205ENST00000498653 TRBV6-5A0A0K0K1A5 114 aa3.42□□□□□ -1.86
FXN-205ENST00000498653 PHOX2AO14813 284 aa3.42□□□□□ -1.86
FXN-205ENST00000498653 TNFRSF6BO95407 300 aa3.42□□□□□ -1.86
FXN-205ENST00000498653 NPYP01303 97 aa3.42□□□□□ -1.86
FXN-205ENST00000498653 SRIP30626 198 aa3.42□□□□□ -1.86
FXN-205ENST00000498653 NRACQ8N912 160 aa3.42□□□□□ -1.86
FXN-205ENST00000498653 ATP6V0E2Q8NHE4 81 aa3.42□□□□□ -1.86
FXN-205ENST00000498653 RPL39LQ96EH5 51 aaKnown RBP3.42□□□□□ -1.86
FXN-205ENST00000498653 C20orf78Q9BR46 151 aa3.42□□□□□ -1.86
FXN-205ENST00000498653 ALKBH7Q9BT30 221 aaPredicted RBP3.42□□□□□ -1.86
FXN-205ENST00000498653 MAP1LC3AQ9H492 121 aa3.42□□□□□ -1.86
FXN-205ENST00000498653 LAMTOR2Q9Y2Q5 125 aa3.42□□□□□ -1.86
FXN-205ENST00000498653 LINC00588Q9Y4M8 146 aa3.42□□□□□ -1.86
FXN-205ENST00000498653 A0A096LPF7 62 aa3.41□□□□□ -1.86
FXN-205ENST00000498653 IGLV5-52A0A0A0MRZ9 124 aa3.41□□□□□ -1.86
FXN-205ENST00000498653 SDHAF1A6NFY7 115 aa3.41□□□□□ -1.86
FXN-205ENST00000498653 VCYO14598 125 aa3.41□□□□□ -1.86
FXN-205ENST00000498653 PRYO14603 147 aa3.41□□□□□ -1.86
FXN-205ENST00000498653 TRGC2P03986 189 aa3.41□□□□□ -1.86
FXN-205ENST00000498653 PMCHP20382 165 aa3.41□□□□□ -1.86
FXN-205ENST00000498653 PCP4P48539 62 aa3.41□□□□□ -1.86
FXN-205ENST00000498653 UBE2D3P61077 147 aa3.41□□□□□ -1.86
FXN-205ENST00000498653 UBE2D2P62837 147 aa3.41□□□□□ -1.86
FXN-205ENST00000498653 RPL32P62910 135 aaKnown RBP3.41□□□□□ -1.86
FXN-205ENST00000498653 TMEM97Q5BJF2 176 aa3.41□□□□□ -1.86
FXN-205ENST00000498653 NEGR1Q7Z3B1 354 aa3.41□□□□□ -1.86
FXN-205ENST00000498653 DAZ4Q86SG3 579 aaKnown RBP3.41□□□□□ -1.86
FXN-205ENST00000498653 DAZ3Q9NR90 486 aaKnown RBP3.41□□□□□ -1.86
FXN-205ENST00000498653 Q9UF83 564 aa3.41□□□□□ -1.86
FXN-205ENST00000498653 KMT2DO14686 5537 aa3.41□□□□□ -1.86
FXN-205ENST00000498653 IGHV3-38A0A0C4DH36 116 aa3.4□□□□□ -1.87
FXN-205ENST00000498653 TRBV27A0A0K0K1C4 114 aa3.4□□□□□ -1.87
FXN-205ENST00000498653 LOC389332A0A1B0GUA5 103 aa3.4□□□□□ -1.87
FXN-205ENST00000498653 PRSS47A8MTI9 375 aa3.4□□□□□ -1.87
FXN-205ENST00000498653 C1orf196B1AJZ1 125 aa3.4□□□□□ -1.87
FXN-205ENST00000498653 I3L3M4 83 aa3.4□□□□□ -1.87
FXN-205ENST00000498653 TCAPO15273 167 aa3.4□□□□□ -1.87
FXN-205ENST00000498653 LINC00694P0DN24 101 aa3.4□□□□□ -1.87
FXN-205ENST00000498653 POLR2KP53803 58 aaKnown RBP3.4□□□□□ -1.87
FXN-205ENST00000498653 LINC01547P58512 204 aaPredicted RBP3.4□□□□□ -1.87
FXN-205ENST00000498653 RPL37AP61513 92 aaKnown RBP3.4□□□□□ -1.87
FXN-205ENST00000498653 COTL1Q14019 142 aa3.4□□□□□ -1.87
FXN-205ENST00000498653 KIR2DL4Q99706 377 aa3.4□□□□□ -1.87
FXN-205ENST00000498653 SMIM2Q9BVW6 85 aa3.4□□□□□ -1.87
FXN-205ENST00000498653 GTSF1LQ9H1H1 148 aa3.4□□□□□ -1.87
FXN-205ENST00000498653 Q9H8V8 135 aa3.4□□□□□ -1.87
FXN-205ENST00000498653 NXT2Q9NPJ8 142 aaKnown RBP3.4□□□□□ -1.87
FXN-205ENST00000498653 IGHV1-24A0A0C4DH33 117 aa3.39□□□□□ -1.87
FXN-205ENST00000498653 FCER1GP30273 86 aa3.39□□□□□ -1.87
FXN-205ENST00000498653 AMTP48728 403 aa3.39□□□□□ -1.87
FXN-205ENST00000498653 CCL18P55774 89 aa3.39□□□□□ -1.87
FXN-205ENST00000498653 RAB5BP61020 215 aa3.39□□□□□ -1.87
FXN-205ENST00000498653 IQCJQ1A5X6 159 aa3.39□□□□□ -1.87
FXN-205ENST00000498653 LYPD5Q6UWN5 251 aa3.39□□□□□ -1.87
FXN-205ENST00000498653 FA2HQ7L5A8 372 aa3.39□□□□□ -1.87
FXN-205ENST00000498653 Q8N8P6 123 aa3.39□□□□□ -1.87
FXN-205ENST00000498653 C18orf32Q8TCD1 76 aa3.39□□□□□ -1.87
FXN-205ENST00000498653 LINC01600Q96MT4 127 aa3.39□□□□□ -1.87
FXN-205ENST00000498653 TM2D2Q9BX73 214 aa3.39□□□□□ -1.87
FXN-205ENST00000498653 TRBV25-1A0A075B6N4 114 aa3.38□□□□□ -1.87
FXN-205ENST00000498653 TRBV6-8A0A0A6YYG3 113 aa3.38□□□□□ -1.87
FXN-205ENST00000498653 TRAV8-6A0A0B4J262 113 aa3.38□□□□□ -1.87
FXN-205ENST00000498653 K7EMI3 77 aa3.38□□□□□ -1.87
FXN-205ENST00000498653 TSHBP01222 138 aa3.38□□□□□ -1.87
FXN-205ENST00000498653 LINC00614P0C842 121 aa3.38□□□□□ -1.87
FXN-205ENST00000498653 IFI27P40305 119 aaPredicted RBP3.38□□□□□ -1.87
FXN-205ENST00000498653 Q0VG73 95 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms