RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 DIRC1Q969H9 104 aa8.47□□□□□ -1.05
CCDC58-207ENST00000498466 GNG13Q9P2W3 67 aa8.47□□□□□ -1.05
CCDC58-207ENST00000498466 RAB19A4D1S5 217 aa8.46□□□□□ -1.06
CCDC58-207ENST00000498466 SDHAF1A6NFY7 115 aa8.46□□□□□ -1.06
CCDC58-207ENST00000498466 EIF5AP63241 154 aaKnown RBP8.46□□□□□ -1.06
CCDC58-207ENST00000498466 RPL18AQ02543 176 aaKnown RBP8.46□□□□□ -1.06
CCDC58-207ENST00000498466 EIF5AL1Q6IS14 154 aaKnown RBP8.46□□□□□ -1.06
CCDC58-207ENST00000498466 SMIM12Q96EX1 92 aa8.46□□□□□ -1.06
CCDC58-207ENST00000498466 MANBALQ9NQG1 85 aa8.46□□□□□ -1.06
CCDC58-207ENST00000498466 I3L3M4 83 aa8.45□□□□□ -1.06
CCDC58-207ENST00000498466 APOMO95445 188 aa8.45□□□□□ -1.06
CCDC58-207ENST00000498466 PMCHP20382 165 aa8.45□□□□□ -1.06
CCDC58-207ENST00000498466 MALP21145 153 aa8.45□□□□□ -1.06
CCDC58-207ENST00000498466 CCL20P78556 96 aa8.45□□□□□ -1.06
CCDC58-207ENST00000498466 NUP35Q8NFH5 326 aa8.45□□□□□ -1.06
CCDC58-207ENST00000498466 CAMK2N2Q96S95 79 aa8.45□□□□□ -1.06
CCDC58-207ENST00000498466 IGLV7-43P04211 117 aa8.44□□□□□ -1.06
CCDC58-207ENST00000498466 SMIM15Q7Z3B0 74 aa8.44□□□□□ -1.06
CCDC58-207ENST00000498466 MRAP2Q96G30 205 aa8.44□□□□□ -1.06
CCDC58-207ENST00000498466 CNFNQ9BYD5 112 aa8.44□□□□□ -1.06
CCDC58-207ENST00000498466 BIN3Q9NQY0 253 aa8.44□□□□□ -1.06
CCDC58-207ENST00000498466 H0Y9J4 135 aa8.43□□□□□ -1.06
CCDC58-207ENST00000498466 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.43□□□□□ -1.06
CCDC58-207ENST00000498466 MEF2BQ02080 365 aaPredicted RBP8.43□□□□□ -1.06
CCDC58-207ENST00000498466 TEX261Q6UWH6 196 aa8.43□□□□□ -1.06
CCDC58-207ENST00000498466 CDC42SE2Q9NRR3 84 aa8.43□□□□□ -1.06
CCDC58-207ENST00000498466 IGLV1-50A0A075B6I6 118 aa8.42□□□□□ -1.06
CCDC58-207ENST00000498466 COX7A2LO14548 114 aa8.42□□□□□ -1.06
CCDC58-207ENST00000498466 ESDP10768 282 aa8.42□□□□□ -1.06
CCDC58-207ENST00000498466 FOXA3P55318 350 aaPredicted RBP8.42□□□□□ -1.06
CCDC58-207ENST00000498466 NUDT10Q8NFP7 164 aa8.42□□□□□ -1.06
CCDC58-207ENST00000498466 NUDT11Q96G61 164 aa8.42□□□□□ -1.06
CCDC58-207ENST00000498466 TRBV20OR9-2A0A075B6H5 130 aa8.41□□□□□ -1.06
CCDC58-207ENST00000498466 A0A087WZ39 114 aa8.41□□□□□ -1.06
CCDC58-207ENST00000498466 KRTAP9-6A0A140TA67 174 aa8.41□□□□□ -1.06
CCDC58-207ENST00000498466 SMLR1H3BR10 107 aa8.41□□□□□ -1.06
CCDC58-207ENST00000498466 BCL2L11O43521 198 aa8.41□□□□□ -1.06
CCDC58-207ENST00000498466 OPRPNQ99935 248 aaPredicted RBP8.41□□□□□ -1.06
CCDC58-207ENST00000498466 TMEM242Q9NWH2 141 aa8.41□□□□□ -1.06
CCDC58-207ENST00000498466 FAT4Q6V0I7 4981 aa8.41□□□□□ -1.06
CCDC58-207ENST00000498466 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.4□□□□□ -1.06
CCDC58-207ENST00000498466 C1orf196B1AJZ1 125 aa8.4□□□□□ -1.06
CCDC58-207ENST00000498466 TSHBP01222 138 aa8.4□□□□□ -1.06
CCDC58-207ENST00000498466 UBE2D1P51668 147 aa8.4□□□□□ -1.06
CCDC58-207ENST00000498466 ZNF345Q14585 488 aa8.4□□□□□ -1.06
CCDC58-207ENST00000498466 MRPL52Q86TS9 123 aaKnown RBP8.4□□□□□ -1.06
CCDC58-207ENST00000498466 C2orf48Q96LS8 159 aa8.4□□□□□ -1.06
CCDC58-207ENST00000498466 RPP21Q9H633 154 aaKnown RBP8.4□□□□□ -1.06
CCDC58-207ENST00000498466 MED9Q9NWA0 146 aa8.4□□□□□ -1.06
CCDC58-207ENST00000498466 TRBV6-5A0A0K0K1A5 114 aa8.39□□□□□ -1.07
CCDC58-207ENST00000498466 PDE6DO43924 150 aa8.39□□□□□ -1.07
CCDC58-207ENST00000498466 TSKUQ8WUA8 353 aa8.39□□□□□ -1.07
CCDC58-207ENST00000498466 RNASE7Q9H1E1 156 aaKnown RBP8.39□□□□□ -1.07
CCDC58-207ENST00000498466 ST20Q9HBF5 79 aa8.39□□□□□ -1.07
CCDC58-207ENST00000498466 TRAV1-1A0A0B4J248 108 aa8.38□□□□□ -1.07
CCDC58-207ENST00000498466 KANTRA0A1W2PQU2 76 aa8.38□□□□□ -1.07
CCDC58-207ENST00000498466 C7orf77A4D0Y5 90 aa8.38□□□□□ -1.07
CCDC58-207ENST00000498466 TEX46H3BTG2 121 aa8.37□□□□□ -1.07
CCDC58-207ENST00000498466 KRTAP1-4P0C5Y4 121 aa8.37□□□□□ -1.07
CCDC58-207ENST00000498466 SPAG11BQ08648 103 aa8.37□□□□□ -1.07
CCDC58-207ENST00000498466 C5orf38Q86SI9 138 aa8.37□□□□□ -1.07
CCDC58-207ENST00000498466 KRTAP11-1Q8IUC1 163 aa8.37□□□□□ -1.07
CCDC58-207ENST00000498466 FAM210AQ96ND0 272 aa8.37□□□□□ -1.07
CCDC58-207ENST00000498466 TRAV13-1A0A0B4J241 112 aa8.36□□□□□ -1.07
CCDC58-207ENST00000498466 FAM168BA1KXE4 195 aa8.36□□□□□ -1.07
CCDC58-207ENST00000498466 GHRHP01286 108 aa8.36□□□□□ -1.07
CCDC58-207ENST00000498466 RPL13AP40429 203 aaKnown RBP8.36□□□□□ -1.07
CCDC58-207ENST00000498466 RNF151Q2KHN1 245 aa8.36□□□□□ -1.07
CCDC58-207ENST00000498466 RNASE13Q5GAN3 156 aaKnown RBP8.36□□□□□ -1.07
CCDC58-207ENST00000498466 FAM19A5Q7Z5A7 132 aaPredicted RBP8.35□□□□□ -1.07
CCDC58-207ENST00000498466 K7EN84 100 aa8.34□□□□□ -1.07
CCDC58-207ENST00000498466 IMMP2LQ96T52 175 aa8.34□□□□□ -1.07
CCDC58-207ENST00000498466 TRBV27A0A0K0K1C4 114 aa8.33□□□□□ -1.08
CCDC58-207ENST00000498466 HMSDA8MTL9 139 aa8.33□□□□□ -1.08
CCDC58-207ENST00000498466 FCER1GP30273 86 aa8.33□□□□□ -1.08
CCDC58-207ENST00000498466 POLR2KP53803 58 aaKnown RBP8.33□□□□□ -1.08
CCDC58-207ENST00000498466 SMAGPQ0VAQ4 97 aa8.33□□□□□ -1.08
CCDC58-207ENST00000498466 OR10D4PQ8NGN7 298 aa8.33□□□□□ -1.08
CCDC58-207ENST00000498466 OCC1Q8TAD7 63 aa8.33□□□□□ -1.08
CCDC58-207ENST00000498466 MRPL35Q9NZE8 188 aaKnown RBP8.33□□□□□ -1.08
CCDC58-207ENST00000498466 UBE2BP63146 152 aa8.32□□□□□ -1.08
CCDC58-207ENST00000498466 UBE2D4Q9Y2X8 147 aa8.32□□□□□ -1.08
CCDC58-207ENST00000498466 CSDC2Q9Y534 153 aaKnown RBP8.32□□□□□ -1.08
CCDC58-207ENST00000498466 NDUFA1O15239 70 aa8.31□□□□□ -1.08
CCDC58-207ENST00000498466 GATCO43716 136 aaKnown RBP8.31□□□□□ -1.08
CCDC58-207ENST00000498466 TSPAN13O95857 204 aa8.31□□□□□ -1.08
CCDC58-207ENST00000498466 GAGE2EQ4V326 116 aa8.31□□□□□ -1.08
CCDC58-207ENST00000498466 ORAOV1Q8WV07 137 aa8.31□□□□□ -1.08
CCDC58-207ENST00000498466 BORCS7Q96B45 105 aa8.31□□□□□ -1.08
CCDC58-207ENST00000498466 GAGE2DQ9UEU5 116 aa8.31□□□□□ -1.08
CCDC58-207ENST00000498466 A8MWL6 223 aa8.3□□□□□ -1.08
CCDC58-207ENST00000498466 M0QXV9 152 aa8.3□□□□□ -1.08
CCDC58-207ENST00000498466 VCYO14598 125 aa8.3□□□□□ -1.08
CCDC58-207ENST00000498466 Q6ZUT4 128 aa8.3□□□□□ -1.08
CCDC58-207ENST00000498466 CARHSP1Q9Y2V2 147 aaKnown RBP8.3□□□□□ -1.08
CCDC58-207ENST00000498466 F8WDY8 70 aa8.29□□□□□ -1.08
CCDC58-207ENST00000498466 TLX1NBP0CAT3 122 aa8.29□□□□□ -1.08
CCDC58-207ENST00000498466 C10orf25Q5T742 122 aa8.29□□□□□ -1.08
CCDC58-207ENST00000498466 RAB4AP20338 218 aa8.28□□□□□ -1.08
CCDC58-207ENST00000498466 TMEM241Q24JQ0 296 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms