RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 C1orf54Q8WWF1 131 aa1.16□□□□□ -2.22
CKS1BP2-201ENST00000497342 AQP3Q92482 292 aa1.16□□□□□ -2.22
CKS1BP2-201ENST00000497342 ADAT1Q9BUB4 502 aaKnown RBP1.16□□□□□ -2.22
CKS1BP2-201ENST00000497342 NPCDR1Q9BY65 106 aa1.16□□□□□ -2.22
CKS1BP2-201ENST00000497342 TAF9BQ9HBM6 251 aa1.16□□□□□ -2.22
CKS1BP2-201ENST00000497342 TMEM138Q9NPI0 162 aa1.16□□□□□ -2.22
CKS1BP2-201ENST00000497342 HSPB8Q9UJY1 196 aa1.16□□□□□ -2.22
CKS1BP2-201ENST00000497342 HIGD1AQ9Y241 93 aa1.16□□□□□ -2.22
CKS1BP2-201ENST00000497342 TRAV3A0A0B4J244 114 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 A0A0G2JQZ4 141 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 A0A1B0GVG6 124 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 A0A1B0GW64 132 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 ZNF727A8MUV8 499 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 TFF1P04155 84 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 AZU1P20160 251 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 SDC2P34741 201 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 RHOGP84095 191 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 VMA21Q3ZAQ7 101 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 KHDC3LQ587J8 217 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 DPPA3Q6W0C5 159 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 C7orf65Q6ZTY9 151 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 OR8I2Q8N0Y5 310 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 OR5AS1Q8N127 324 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 LRRC18Q8N456 261 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 DNAJC9Q8WXX5 260 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 CACYBPQ9HB71 228 aaKnown RBP1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 BCL2L10Q9HD36 194 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 C14orf132Q9NPU4 83 aa1.15□□□□□ -2.23
CKS1BP2-201ENST00000497342 RFPL4AA6NLU0 287 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 HMSDA8MTL9 139 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 RFPL4AL1F8VTS6 287 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 F8W036 122 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 G3V318 75 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 DPM2O94777 84 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 OR2H2O95918 312 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 CXCL1P09341 107 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 DEFA4P12838 97 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 CCL3L1P16619 93 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 SPRR2EP22531 72 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 KDELR1P24390 212 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 SPRR2BP35325 72 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 SPRR2AP35326 72 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 Q1T7F1 81 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 ESRGQ1W209 222 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 GLYATL3Q5SZD4 288 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 OR2T2Q6IF00 324 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 EIF5AL1Q6IS14 154 aaKnown RBP1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 SOSTDC1Q6X4U4 206 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 LINC00305Q7Z4B0 112 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 TCTE3Q8IZS6 198 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 Q8N814 137 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 OR5D16Q8NGK9 328 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 MAGOHBQ96A72 148 aaKnown RBP1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 GAFA1Q96PS6 74 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 TIMM21Q9BVV7 248 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 TRAPPC2LQ9UL33 140 aa1.14□□□□□ -2.23
CKS1BP2-201ENST00000497342 IGKV1D-42A0A075B6H8 117 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 MEIKINA0A087WXM9 373 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 TRAV12-1A0A0B4J245 112 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 E7EUB6 86 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 C17orf112F2Z3M2 114 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 H3BMG7 143 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 CST8O60676 142 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 TIMM17BO60830 172 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 SULT1C4O75897 302 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 PMP2P02689 132 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 RBP4P02753 201 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 TRGC1P0CF51 173 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 UBBP0CG47 229 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 NDUFA6P56556 154 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 MRPS36P82909 103 aaKnown RBP1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 ZNF846Q147U1 533 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 LINC00301Q8NCQ3 95 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 OR51A4Q8NGJ6 313 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 DYNLRB2Q8TF09 96 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 ZC2HC1AQ96GY0 325 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 CGREF1Q99674 301 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 GINS4Q9BRT9 223 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 COPZ2Q9P299 210 aa1.13□□□□□ -2.23
CKS1BP2-201ENST00000497342 TRAV13-1A0A0B4J241 112 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 ODAMA1E959 279 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 IQCF6A8MYZ5 107 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 OOSP1A8MZH6 123 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 UQCRQO14949 82 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 RER1O15258 196 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 SPART-AS1P0CW21 52 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 HTN3P15516 51 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 SPRR2DP22532 72 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 EIF2B2P49770 351 aaKnown RBP1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 DNAJB13P59910 316 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 ERHP84090 104 aaKnown RBP1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 HAGHLQ6PII5 290 aaPredicted RBP1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 MMGT1Q8N4V1 131 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 LINC00471Q8N535 108 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 Q8N6K4 173 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 TCTEX1D1Q8N7M0 179 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 LZICQ8WZA0 190 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 HYLS1Q96M11 299 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 PFDN5Q99471 154 aa1.12□□□□□ -2.23
CKS1BP2-201ENST00000497342 SLC50A1Q9BRV3 221 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms