RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 SCO1O75880 301 aa9.76□□□□□ -0.85
NEK4-206ENST00000496822 APCSP02743 223 aa9.76□□□□□ -0.85
NEK4-206ENST00000496822 CKS2P33552 79 aa9.76□□□□□ -0.85
NEK4-206ENST00000496822 KRTAP10-4P60372 401 aaPredicted RBP9.76□□□□□ -0.85
NEK4-206ENST00000496822 MRPL51Q4U2R6 128 aaKnown RBP9.75□□□□□ -0.85
NEK4-206ENST00000496822 ORMDL3Q8N138 153 aa9.75□□□□□ -0.85
NEK4-206ENST00000496822 RNF185Q96GF1 192 aa9.75□□□□□ -0.85
NEK4-206ENST00000496822 MRPL18Q9H0U6 180 aaKnown RBP9.75□□□□□ -0.85
NEK4-206ENST00000496822 TRAPPC1Q9Y5R8 145 aa9.75□□□□□ -0.85
NEK4-206ENST00000496822 AMTP48728 403 aa9.74□□□□□ -0.85
NEK4-206ENST00000496822 RPL39LQ96EH5 51 aaKnown RBP9.74□□□□□ -0.85
NEK4-206ENST00000496822 LAMTOR2Q9Y2Q5 125 aa9.74□□□□□ -0.85
NEK4-206ENST00000496822 A0A1B0GUV1 79 aa9.73□□□□□ -0.85
NEK4-206ENST00000496822 FABP9Q0Z7S8 132 aa9.73□□□□□ -0.85
NEK4-206ENST00000496822 COTL1Q14019 142 aa9.73□□□□□ -0.85
NEK4-206ENST00000496822 COLCA2A8K830 154 aa9.72□□□□□ -0.85
NEK4-206ENST00000496822 D6R8Y8 96 aa9.72□□□□□ -0.85
NEK4-206ENST00000496822 PHOX2AO14813 284 aa9.72□□□□□ -0.85
NEK4-206ENST00000496822 RAB5AP20339 215 aa9.72□□□□□ -0.85
NEK4-206ENST00000496822 RPS10P46783 165 aaKnown RBP9.72□□□□□ -0.85
NEK4-206ENST00000496822 LRP1Q07954 4544 aaKnown RBP9.71□□□□□ -0.85
NEK4-206ENST00000496822 PANO1I0J062 215 aa9.71□□□□□ -0.86
NEK4-206ENST00000496822 UBE2L6O14933 153 aa9.71□□□□□ -0.86
NEK4-206ENST00000496822 NCR2O95944 276 aa9.71□□□□□ -0.86
NEK4-206ENST00000496822 DGAT2L7PQ6IED9 249 aa9.71□□□□□ -0.86
NEK4-206ENST00000496822 C9orf163Q8N9P6 203 aa9.71□□□□□ -0.86
NEK4-206ENST00000496822 PRELID3AQ96N28 172 aa9.71□□□□□ -0.86
NEK4-206ENST00000496822 ST20Q9HBF5 79 aa9.71□□□□□ -0.86
NEK4-206ENST00000496822 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.71□□□□□ -0.86
NEK4-206ENST00000496822 PKHD1L1Q86WI1 4243 aa9.7□□□□□ -0.86
NEK4-206ENST00000496822 TRAV8-4A0A0B4J246 113 aa9.7□□□□□ -0.86
NEK4-206ENST00000496822 TRBV6-5A0A0K0K1A5 114 aa9.7□□□□□ -0.86
NEK4-206ENST00000496822 J3QL48 77 aa9.7□□□□□ -0.86
NEK4-206ENST00000496822 C20orf78Q9BR46 151 aa9.7□□□□□ -0.86
NEK4-206ENST00000496822 FAT3Q8TDW7 4589 aa9.7□□□□□ -0.86
NEK4-206ENST00000496822 hDV102S1A0JD36 115 aa9.69□□□□□ -0.86
NEK4-206ENST00000496822 SMKR1H3BMG3 65 aa9.69□□□□□ -0.86
NEK4-206ENST00000496822 GAS8-AS1O95177 125 aa9.69□□□□□ -0.86
NEK4-206ENST00000496822 TNFRSF6BO95407 300 aa9.69□□□□□ -0.86
NEK4-206ENST00000496822 MAP1LC3AQ9H492 121 aa9.69□□□□□ -0.86
NEK4-206ENST00000496822 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.68□□□□□ -0.86
NEK4-206ENST00000496822 IGKV3OR2-268A0A0C4DH90 116 aa9.68□□□□□ -0.86
NEK4-206ENST00000496822 IGKV2-29A2NJV5 120 aaPredicted RBP9.68□□□□□ -0.86
NEK4-206ENST00000496822 KRTAP29-1A8MX34 341 aaPredicted RBP9.68□□□□□ -0.86
NEK4-206ENST00000496822 TCAPO15273 167 aa9.68□□□□□ -0.86
NEK4-206ENST00000496822 SUMO2P61956 95 aaKnown RBP9.68□□□□□ -0.86
NEK4-206ENST00000496822 KIAA1644Q3SXP7 199 aa9.68□□□□□ -0.86
NEK4-206ENST00000496822 SDIM1Q6ZPB5 146 aa9.68□□□□□ -0.86
NEK4-206ENST00000496822 NRACQ8N912 160 aa9.68□□□□□ -0.86
NEK4-206ENST00000496822 SDHAF1A6NFY7 115 aa9.67□□□□□ -0.86
NEK4-206ENST00000496822 VCYO14598 125 aa9.67□□□□□ -0.86
NEK4-206ENST00000496822 SLPIP03973 132 aa9.67□□□□□ -0.86
NEK4-206ENST00000496822 PMCHP20382 165 aa9.67□□□□□ -0.86
NEK4-206ENST00000496822 CNBPP62633 177 aaKnown RBP9.67□□□□□ -0.86
NEK4-206ENST00000496822 GAGE12HA6NDE8 117 aa9.66□□□□□ -0.86
NEK4-206ENST00000496822 I3L3M4 83 aa9.66□□□□□ -0.86
NEK4-206ENST00000496822 NPYP01303 97 aa9.66□□□□□ -0.86
NEK4-206ENST00000496822 RPL32P62910 135 aaKnown RBP9.66□□□□□ -0.86
NEK4-206ENST00000496822 C15orf56Q8N910 161 aa9.66□□□□□ -0.86
NEK4-206ENST00000496822 KIR2DL4Q99706 377 aa9.66□□□□□ -0.86
NEK4-206ENST00000496822 ALKBH7Q9BT30 221 aaPredicted RBP9.66□□□□□ -0.86
NEK4-206ENST00000496822 TRGC2P03986 189 aa9.65□□□□□ -0.86
NEK4-206ENST00000496822 RPL37AP61513 92 aaKnown RBP9.65□□□□□ -0.86
NEK4-206ENST00000496822 RNASEKQ6P5S7 137 aaKnown RBP9.65□□□□□ -0.86
NEK4-206ENST00000496822 SMIM2Q9BVW6 85 aa9.65□□□□□ -0.86
NEK4-206ENST00000496822 NXT2Q9NPJ8 142 aaKnown RBP9.65□□□□□ -0.86
NEK4-206ENST00000496822 TRBV27A0A0K0K1C4 114 aa9.64□□□□□ -0.87
NEK4-206ENST00000496822 FGF6P10767 208 aa9.64□□□□□ -0.87
NEK4-206ENST00000496822 FCER1GP30273 86 aa9.64□□□□□ -0.87
NEK4-206ENST00000496822 HNRNPA3P51991 378 aaKnown RBP9.64□□□□□ -0.87
NEK4-206ENST00000496822 POLR2KP53803 58 aaKnown RBP9.64□□□□□ -0.87
NEK4-206ENST00000496822 AMMECR1LQ6DCA0 310 aa9.64□□□□□ -0.87
NEK4-206ENST00000496822 PRSS47A8MTI9 375 aa9.63□□□□□ -0.87
NEK4-206ENST00000496822 K7EMI3 77 aa9.63□□□□□ -0.87
NEK4-206ENST00000496822 TSHBP01222 138 aa9.63□□□□□ -0.87
NEK4-206ENST00000496822 CHTF8P0CG12 524 aa9.63□□□□□ -0.87
NEK4-206ENST00000496822 CIRBPQ14011 172 aaKnown RBP9.63□□□□□ -0.87
NEK4-206ENST00000496822 PRSS3P2Q8NHM4 247 aa9.63□□□□□ -0.87
NEK4-206ENST00000496822 AP5S1Q9NUS5 200 aa9.63□□□□□ -0.87
NEK4-206ENST00000496822 IGHV3-64A0A075B6Q5 118 aa9.62□□□□□ -0.87
NEK4-206ENST00000496822 LOC389332A0A1B0GUA5 103 aa9.62□□□□□ -0.87
NEK4-206ENST00000496822 C1orf196B1AJZ1 125 aa9.62□□□□□ -0.87
NEK4-206ENST00000496822 H7C423 109 aa9.62□□□□□ -0.87
NEK4-206ENST00000496822 RAB5BP61020 215 aa9.62□□□□□ -0.87
NEK4-206ENST00000496822 HIGD2BQ4VC39 106 aa9.62□□□□□ -0.87
NEK4-206ENST00000496822 Q8N8P6 123 aa9.62□□□□□ -0.87
NEK4-206ENST00000496822 CHCHD10Q8WYQ3 142 aaPredicted RBP9.62□□□□□ -0.87
NEK4-206ENST00000496822 ESDP10768 282 aa9.61□□□□□ -0.87
NEK4-206ENST00000496822 G0S2P27469 103 aa9.61□□□□□ -0.87
NEK4-206ENST00000496822 FA2HQ7L5A8 372 aa9.61□□□□□ -0.87
NEK4-206ENST00000496822 HMCN2Q8NDA2 5059 aa9.61□□□□□ -0.87
NEK4-206ENST00000496822 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.6□□□□□ -0.87
NEK4-206ENST00000496822 SMAGPQ0VAQ4 97 aa9.6□□□□□ -0.87
NEK4-206ENST00000496822 FOXI1Q12951 378 aa9.6□□□□□ -0.87
NEK4-206ENST00000496822 C18orf32Q8TCD1 76 aa9.6□□□□□ -0.87
NEK4-206ENST00000496822 SPACA4Q8TDM5 124 aa9.6□□□□□ -0.87
NEK4-206ENST00000496822 ZNF25P17030 456 aaPredicted RBP9.59□□□□□ -0.87
NEK4-206ENST00000496822 ORMDL2Q53FV1 153 aa9.59□□□□□ -0.87
NEK4-206ENST00000496822 OR5A1Q8NGJ0 315 aa9.59□□□□□ -0.87
NEK4-206ENST00000496822 TMEM18Q96B42 140 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 212.4 ms